Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_00515

Experiment: syringaldehyde 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	syringaldehyde 5 mM
104,817	-		AO353_00510	0.80	-0.3
104,817	-		AO353_00510	0.80	-0.2
105,061	+				+0.7
105,061	+				+0.4
105,061	+				+0.7
105,062	-				-0.4
105,062	-				+0.1
105,062	-				+1.1
105,133	+				-0.1
105,133	+				+0.1
105,134	-				-2.1
105,134	-				+1.2
105,134	-				+0.7
105,134	-				+0.1
105,134	-				+0.8
105,134	-				-1.3
105,237	+				+1.3
105,237	+				-0.5
105,238	-				-0.9
105,245	+				-0.3
105,245	+				-1.3
105,245	+				-0.9
105,245	+				+1.7
105,245	+				-0.9
105,246	-				-0.3
105,285	+				-0.6
105,285	+				-2.5
105,285	+				+0.7
105,286	-				-1.6
105,325	-				+0.7
105,337	-				+0.4
105,372	-				-0.5
105,385	+				+0.7
105,398	+				-0.4
105,398	+				+1.5
105,399	-				-0.2
105,399	-				-1.3
105,401	+				-0.5
105,401	+				-1.0
105,402	-				-0.9
105,402	-				+1.4
105,402	-				+1.1
105,402	-				-0.5
105,554	+				+1.0
105,554	+				+0.3
105,554	+				+0.3
105,554	+				+0.5
105,555	-				-0.9
105,555	-				-0.5
105,560	+				-0.3
105,560	+				+0.7
105,560	+				+3.2
105,561	-				+2.3
105,561	-				-1.3
105,570	-				-0.3
105,570	-				+1.3
105,570	-				-0.9
105,573	+				-0.5
105,587	+				-2.2
105,587	+				-0.7
105,588	-				+1.7
105,588	-				+0.3
105,588	-				-0.4
105,591	+				-0.9
105,591	+				+0.0
105,591	+				+0.4
105,591	+				+1.2
105,591	+				-1.1
105,591	+				-1.2
105,591	+				+1.1
105,591	+				-0.0
105,591	+				+0.5
105,591	+				-1.1
105,592	-				-1.9
105,592	-				+1.0
105,592	-				+0.4
105,592	-				-0.8
105,592	-				-0.1
105,609	+				+2.3
105,609	+				+2.4
105,609	+				-1.1
105,609	+				+1.5
105,616	+				-0.3
105,616	+				-0.9
105,617	-				-1.6
105,617	-				-1.3
105,617	-				+0.3
105,617	-				-0.4
105,635	-				-2.1
105,719	-				+0.2
105,778	+				+2.3
105,779	-				+0.1
105,830	+				+0.0
105,830	+				+0.2
105,858	+		AO353_00515	0.15	+0.1
105,858	+		AO353_00515	0.15	+1.3
105,858	+		AO353_00515	0.15	+0.0
105,858	+		AO353_00515	0.15	-1.2
105,859	-		AO353_00515	0.16	+1.3
105,894	+		AO353_00515	0.24	-1.1
105,895	-		AO353_00515	0.24	-1.6
105,895	-		AO353_00515	0.24	-0.9
105,895	-		AO353_00515	0.24	-0.4
105,895	-		AO353_00515	0.24	-2.5
105,994	-				-1.3
106,157	-		AO353_00515	0.84	-0.3
106,228	+				+0.7
106,228	+				-0.6
106,228	+				+1.4
106,228	+				+1.0
106,228	+				+0.1
106,228	+				-0.3
106,228	+				-1.3
106,229	-				+1.1
106,229	-				+0.9
106,235	-				-1.5
106,235	-				-0.2
106,296	+				+1.5
106,296	+				-0.7
106,296	+				+0.5
106,296	+				+1.2
106,296	+				+0.4
106,296	+				+0.5
106,296	+				+0.4
106,296	+				+0.2
106,296	+				-0.6
106,297	-				-0.9
106,297	-				+2.3
106,297	-				-0.2
106,297	-				+0.4
106,300	+				+0.5
106,300	+				-0.0
106,300	+				-0.1
106,347	+				-0.3
106,347	+				-1.9
106,347	+				-0.3
106,347	+				-1.6
106,347	+				-0.3
106,348	-				-0.3
106,348	-				-0.2
106,348	-				+0.5
106,348	-				-1.2
106,348	-				-0.3
106,361	+				+0.1
106,361	+				-1.3
106,368	-				-0.0
106,368	-				-1.6
106,368	-				-1.1
106,446	+		AO353_00520	0.26	-1.3
106,447	-		AO353_00520	0.26	+0.5
106,447	-		AO353_00520	0.26	-0.4
106,447	-		AO353_00520	0.26	-1.2
106,447	-		AO353_00520	0.26	+1.0
106,561	+		AO353_00520	0.52	+0.7
106,561	+		AO353_00520	0.52	-2.1
106,561	+		AO353_00520	0.52	+1.3
106,582	+		AO353_00520	0.57	-1.3
106,583	-		AO353_00520	0.57	-1.6
106,598	-		AO353_00520	0.61	+0.3
106,626	+		AO353_00520	0.67	-0.3
106,626	+		AO353_00520	0.67	+0.1
106,626	+		AO353_00520	0.67	-1.2
106,626	+		AO353_00520	0.67	+0.2
106,627	-		AO353_00520	0.67	+0.8
106,627	-		AO353_00520	0.67	+0.8
106,627	-		AO353_00520	0.67	-1.8
106,772	+				+0.4
106,772	+				-0.5
106,772	+				+0.6
106,772	+				+0.1
106,772	+				+0.1
106,772	+				+0.1
106,773	-				-1.5
106,773	-				-0.3
106,773	-				-1.1
106,795	+				+0.1
106,795	+				+1.4
106,795	+				+1.9
106,795	+				-1.9
106,795	+				+0.4
106,796	-				-0.6
106,796	-				-1.6
106,796	-				-0.3
106,796	-				-1.3
106,826	+				+0.1
106,827	-				+1.3
106,827	-				-0.9
106,880	+				-1.6
106,880	+				+1.7
106,880	+				-1.6
106,881	-				+0.1
106,916	+				-2.1
106,916	+				-1.3
106,917	-				-1.6
106,983	+				-0.8
106,984	-				+0.4
106,984	-				+0.3
107,053	+				+0.7
107,053	+				-0.7
107,053	+				+0.9
107,054	-				+0.5
107,054	-				+0.7
107,054	-				+2.3
107,054	-				+0.7
107,152	+		AO353_00525	0.11	-0.3
107,152	+		AO353_00525	0.11	-1.0
107,152	+		AO353_00525	0.11	+0.3
107,152	+		AO353_00525	0.11	-0.4
107,152	+		AO353_00525	0.11	-1.6
107,153	-		AO353_00525	0.11	+0.9
107,153	-		AO353_00525	0.11	-1.6
107,153	-		AO353_00525	0.11	+1.2
107,153	-		AO353_00525	0.11	-0.3
107,153	-		AO353_00525	0.11	+1.2
107,153	-		AO353_00525	0.11	+0.3
107,153	-		AO353_00525	0.11	-0.1