Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS06815

Experiment: R2A control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A control
1,465,638	+		LRK54_RS06810	0.40	-1.7
1,465,638	+		LRK54_RS06810	0.40	-1.7
1,465,638	+		LRK54_RS06810	0.40	-0.2
1,465,638	+		LRK54_RS06810	0.40	-0.3
1,465,638	+		LRK54_RS06810	0.40	-1.0
1,465,638	+		LRK54_RS06810	0.40	+0.4
1,465,638	+		LRK54_RS06810	0.40	+0.4
1,465,638	+		LRK54_RS06810	0.40	-0.9
1,465,638	+		LRK54_RS06810	0.40	-0.2
1,465,638	+		LRK54_RS06810	0.40	-0.7
1,465,638	+		LRK54_RS06810	0.40	+1.2
1,465,638	+		LRK54_RS06810	0.40	+0.1
1,465,638	+		LRK54_RS06810	0.40	-0.6
1,465,639	-		LRK54_RS06810	0.40	-0.9
1,465,639	-		LRK54_RS06810	0.40	+0.7
1,465,639	-		LRK54_RS06810	0.40	-0.7
1,465,639	-		LRK54_RS06810	0.40	-2.7
1,465,639	-		LRK54_RS06810	0.40	-3.0
1,465,639	-		LRK54_RS06810	0.40	-0.3
1,465,639	-		LRK54_RS06810	0.40	+0.7
1,465,639	-		LRK54_RS06810	0.40	-2.0
1,465,639	-		LRK54_RS06810	0.40	-2.2
1,465,639	-		LRK54_RS06810	0.40	-0.7
1,465,639	-		LRK54_RS06810	0.40	-1.5
1,465,639	-		LRK54_RS06810	0.40	-3.6
1,465,639	-		LRK54_RS06810	0.40	-1.2
1,465,791	+		LRK54_RS06810	0.57	-1.2
1,465,791	+		LRK54_RS06810	0.57	-0.3
1,465,791	+		LRK54_RS06810	0.57	-1.5
1,465,791	+		LRK54_RS06810	0.57	-0.2
1,465,791	+		LRK54_RS06810	0.57	-0.1
1,465,792	-		LRK54_RS06810	0.57	-1.1
1,465,792	-		LRK54_RS06810	0.57	-0.9
1,465,810	+		LRK54_RS06810	0.59	-1.1
1,465,810	+		LRK54_RS06810	0.59	-0.9
1,465,810	+		LRK54_RS06810	0.59	-0.8
1,465,810	+		LRK54_RS06810	0.59	-1.3
1,465,810	+		LRK54_RS06810	0.59	-1.3
1,465,810	+		LRK54_RS06810	0.59	-0.3
1,465,811	-		LRK54_RS06810	0.59	-1.1
1,465,811	-		LRK54_RS06810	0.59	-0.1
1,465,811	-		LRK54_RS06810	0.59	-3.1
1,465,811	-		LRK54_RS06810	0.59	+0.1
1,465,811	-		LRK54_RS06810	0.59	+0.4
1,465,811	-		LRK54_RS06810	0.59	+0.7
1,465,811	-		LRK54_RS06810	0.59	-2.8
1,465,811	-		LRK54_RS06810	0.59	-1.0
1,465,811	-		LRK54_RS06810	0.59	+0.1
1,466,103	+				-1.5
1,466,103	+				-0.4
1,466,103	+				-0.0
1,466,103	+				+0.9
1,466,104	-				-1.5
1,466,104	-				-1.3
1,466,104	-				-3.7
1,466,254	+				-0.4
1,466,254	+				-0.2
1,466,254	+				-0.3
1,466,254	+				-0.5
1,466,254	+				-0.8
1,466,254	+				-1.0
1,466,254	+				-0.4
1,466,254	+				+0.2
1,466,255	-				-2.0
1,466,255	-				+0.7
1,466,255	-				-0.6
1,466,255	-				+0.8
1,466,255	-				-0.1
1,466,255	-				-0.6
1,466,255	-				+0.4
1,466,255	-				-0.5
1,466,255	-				-2.3
1,466,255	-				-0.2
1,466,255	-				+0.7
1,466,255	-				-0.2
1,466,255	-				+0.7
1,466,255	-				-0.3
1,466,255	-				-1.0
1,466,267	+				-1.3
1,466,267	+				-0.0
1,466,267	+				+0.6
1,466,267	+				-0.1
1,466,267	+				-0.3
1,466,291	+				+0.4
1,466,291	+				+0.2
1,466,291	+				+0.2
1,466,291	+				-0.9
1,466,291	+				+0.1
1,466,291	+				+1.7
1,466,291	+				+0.2
1,466,291	+				-0.8
1,466,291	+				-1.3
1,466,291	+				-0.8
1,466,291	+				-1.2
1,466,291	+				-0.6
1,466,291	+				-0.9
1,466,291	+				-1.5
1,466,291	+				+0.7
1,466,291	+				+0.0
1,466,291	+				-0.1
1,466,291	+				+0.3
1,466,291	+				-0.3
1,466,291	+				+1.1
1,466,291	+				-1.8
1,466,291	+				-0.5
1,466,291	+				+0.1
1,466,291	+				-2.1
1,466,291	+				+0.3
1,466,291	+				-0.6
1,466,291	+				+0.7
1,466,291	+				-0.1
1,466,291	+				-0.3
1,466,291	+				-0.4
1,466,291	+				-1.9
1,466,291	+				+0.1
1,466,291	+				+0.3
1,466,291	+				-0.6
1,466,291	+				-0.1
1,466,291	+				-0.2
1,466,291	+				+0.3
1,466,291	+				+0.4
1,466,291	+				+0.3
1,466,291	+				-0.1
1,466,291	+				+1.3
1,466,291	+				-0.7
1,466,291	+				-0.0
1,466,291	+				-1.9
1,466,291	+				+0.6
1,466,291	+				-0.3
1,466,291	+				-0.1
1,466,291	+				-0.4
1,466,291	+				-0.5
1,466,291	+				-1.7
1,466,291	+				-0.5
1,466,291	+				-0.0
1,466,291	+				-0.6
1,466,291	+				+0.7
1,466,291	+				-0.3
1,466,291	+				-2.2
1,466,291	+				-1.5
1,466,291	+				-0.3
1,466,291	+				+0.6
1,466,291	+				+1.1
1,466,291	+				-0.9
1,466,291	+				-0.1
1,466,291	+				+0.3
1,466,291	+				-0.3
1,466,291	+				-1.1
1,466,291	+				+0.6
1,466,292	-				+1.1
1,466,292	-				-0.9
1,466,292	-				+0.7
1,466,292	-				-0.7
1,466,292	-				-0.7
1,466,292	-				+0.6
1,466,292	-				-0.1
1,466,292	-				+0.1
1,466,292	-				-0.2
1,466,292	-				+0.1
1,466,292	-				-1.6
1,466,292	-				-0.6
1,466,292	-				-2.1
1,466,292	-				+0.7
1,466,292	-				-0.7
1,466,292	-				-2.0
1,466,292	-				-1.4
1,466,292	-				-1.2
1,466,292	-				+1.3
1,466,292	-				+0.2
1,466,292	-				-0.6
1,466,292	-				-1.7
1,466,292	-				+0.5
1,466,292	-				-0.8
1,466,292	-				-0.3
1,466,292	-				-2.0
1,466,292	-				+1.0
1,466,292	-				-0.8
1,466,292	-				-1.8
1,466,292	-				-0.4
1,466,292	-				+0.3
1,466,292	-				-1.2
1,466,292	-				-1.8
1,466,292	-				+0.3
1,466,292	-				+0.4
1,466,292	-				-0.5
1,466,292	-				-0.1
1,466,292	-				+0.2
1,466,292	-				-0.1
1,466,292	-				+1.0
1,466,292	-				-1.2
1,466,292	-				-1.2
1,466,292	-				-0.6
1,466,292	-				+0.1
1,466,292	-				+0.6
1,466,292	-				-1.0
1,466,292	-				-0.3
1,466,292	-				+0.4
1,466,292	-				-0.9
1,466,292	-				-1.3
1,466,293	+				-0.8
1,466,293	+				+0.2
1,466,293	+				+0.4
1,466,293	+				+0.5
1,466,294	-				-1.7
1,466,495	+		LRK54_RS06815	0.24	-0.8
1,466,495	+		LRK54_RS06815	0.24	-0.7
1,466,495	+		LRK54_RS06815	0.24	-0.3
1,466,496	-		LRK54_RS06815	0.24	-0.9
1,466,496	-		LRK54_RS06815	0.24	+1.5
1,466,496	-		LRK54_RS06815	0.24	+0.0
1,466,496	-		LRK54_RS06815	0.24	-0.1
1,466,496	-		LRK54_RS06815	0.24	-0.7
1,466,496	-		LRK54_RS06815	0.24	+0.1
1,466,496	-		LRK54_RS06815	0.24	+0.0
1,467,026	+		LRK54_RS06815	0.86	+0.5
1,467,026	+		LRK54_RS06815	0.86	+0.1
1,467,026	+		LRK54_RS06815	0.86	-0.3
1,467,027	-		LRK54_RS06815	0.86	+2.1
1,467,027	-		LRK54_RS06815	0.86	-0.7
1,467,027	-		LRK54_RS06815	0.86	+0.7
1,467,144	-				-0.3
1,467,144	-				+0.1
1,467,158	+				-0.0
1,467,158	+				-0.7
1,467,158	+				-0.9
1,467,159	-				-0.9
1,467,159	-				-2.0
1,467,162	+				-0.7
1,467,162	+				-0.3
1,467,162	+				+0.1
1,467,162	+				+0.2
1,467,162	+				+0.7
1,467,162	+				+1.7
1,467,163	-				-1.1
1,467,163	-				-0.6
1,467,163	-				-0.6
1,467,163	-				-1.1
1,467,163	-				-1.9
1,467,163	-				+0.5
1,467,163	-				-1.8
1,467,163	-				-1.3
1,467,163	-				+0.1
1,467,225	+				-1.1
1,467,225	+				-0.3
1,467,226	-				-1.7
1,467,253	+				-0.9
1,467,254	-				-2.5
1,467,254	-				-0.3
1,467,318	+				-0.7
1,467,318	+				+0.3
1,467,318	+				-1.9
1,467,319	-				-2.3
1,467,437	+		LRK54_RS06820	0.41	-0.9
1,467,437	+		LRK54_RS06820	0.41	+0.1
1,467,437	+		LRK54_RS06820	0.41	+0.7
1,467,437	+		LRK54_RS06820	0.41	-3.5
1,467,437	+		LRK54_RS06820	0.41	-2.6
1,467,438	-		LRK54_RS06820	0.41	-0.7
1,467,438	-		LRK54_RS06820	0.41	-1.7
1,467,623	+				-0.1
1,467,623	+				+0.6
1,467,623	+				-0.7
1,467,623	+				+1.3
1,467,623	+				+0.0
1,467,624	-				-0.7
1,467,624	-				-1.2
1,467,624	-				-1.9
1,467,624	-				+0.1
1,467,657	+				+0.0
1,467,657	+				+0.0
1,467,657	+				-0.9
1,467,657	+				+0.5
1,467,658	-				-1.1
1,467,658	-				-0.6
1,467,658	-				-0.3
1,467,658	-				-0.9
1,467,658	-				-1.9
1,467,659	+				-1.7
1,467,659	+				-0.4
1,467,659	+				+0.3
1,467,659	+				-3.4
1,467,659	+				+0.2
1,467,659	+				-0.3
1,467,659	+				-0.6
1,467,659	+				+0.5
1,467,659	+				-0.2
1,467,659	+				-0.7
1,467,659	+				+2.2
1,467,660	-				+0.7
1,467,660	-				-1.5
1,467,660	-				-0.7
1,467,683	+				-1.3
1,467,684	-				-1.9