Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_25540

Experiment: Furfuryl Alcohol 0.25 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_25535 and AO353_25540 overlap by 4 nucleotidesAO353_25540 and AO353_25545 overlap by 1 nucleotidesAO353_25545 and AO353_25550 overlap by 4 nucleotides AO353_25535: AO353_25535 - UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase, at 5,632,594 to 5,633,613 _25535 AO353_25540: AO353_25540 - UDP-4-amino-4-deoxy-L-arabinose formyltransferase, at 5,633,610 to 5,635,601 _25540 AO353_25545: AO353_25545 - 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase, at 5,635,601 to 5,636,485 _25545 AO353_25550: AO353_25550 - 4-amino-4-deoxy-L-arabinose transferase, at 5,636,482 to 5,638,131 _25550 Position (kb) 5633 5634 5635 5636Strain fitness (log2 ratio) -2 -1 0 1 2at 5632.611 kb on + strandat 5633.535 kb on + strandat 5633.535 kb on + strandat 5633.535 kb on + strandat 5633.535 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.25 vol%
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5,632,611 + +1.0
5,633,535 + -2.4
5,633,535 + +2.0
5,633,535 + -0.9
5,633,535 + -1.4

Or see this region's nucleotide sequence