Experiment: Furfuryl Alcohol 0.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24635 and AO353_24640 are separated by 521 nucleotides AO353_24640 and AO353_24645 are separated by 1 nucleotides AO353_24645 and AO353_24650 are separated by 170 nucleotides
AO353_24635: AO353_24635 - hypothetical protein, at 5,421,086 to 5,421,400
_24635
AO353_24640: AO353_24640 - hypothetical protein, at 5,421,922 to 5,422,335
_24640
AO353_24645: AO353_24645 - hypothetical protein, at 5,422,337 to 5,424,217
_24645
AO353_24650: AO353_24650 - hypothetical protein, at 5,424,388 to 5,426,157
_24650
Position (kb) 5422
5423
5424
5425 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5421.348 kb on + strand, within AO353_24635 at 5421.348 kb on + strand, within AO353_24635 at 5421.348 kb on + strand, within AO353_24635 at 5421.349 kb on - strand, within AO353_24635 at 5421.349 kb on - strand, within AO353_24635 at 5421.411 kb on - strand at 5421.472 kb on - strand at 5421.477 kb on + strand at 5421.478 kb on - strand at 5421.478 kb on - strand at 5421.480 kb on + strand at 5421.480 kb on + strand at 5421.584 kb on + strand at 5421.584 kb on + strand at 5421.585 kb on - strand at 5421.587 kb on + strand at 5421.587 kb on + strand at 5421.587 kb on + strand at 5421.587 kb on + strand at 5421.587 kb on + strand at 5421.587 kb on + strand at 5421.588 kb on - strand at 5421.588 kb on - strand at 5421.617 kb on + strand at 5421.618 kb on - strand at 5421.678 kb on - strand at 5421.678 kb on - strand at 5421.678 kb on - strand at 5421.725 kb on + strand at 5421.726 kb on - strand at 5421.726 kb on - strand at 5421.726 kb on - strand at 5421.776 kb on + strand at 5421.776 kb on + strand at 5421.776 kb on + strand at 5421.777 kb on - strand at 5421.777 kb on - strand at 5421.799 kb on + strand at 5421.799 kb on + strand at 5421.799 kb on + strand at 5421.800 kb on - strand at 5421.828 kb on + strand at 5421.828 kb on + strand at 5421.828 kb on + strand at 5421.828 kb on + strand at 5421.828 kb on + strand at 5421.828 kb on + strand at 5421.829 kb on - strand at 5421.829 kb on - strand at 5421.829 kb on - strand at 5421.832 kb on + strand at 5421.832 kb on + strand at 5421.832 kb on + strand at 5421.833 kb on - strand at 5421.833 kb on - strand at 5421.899 kb on + strand at 5421.899 kb on + strand at 5421.982 kb on + strand, within AO353_24640 at 5421.982 kb on + strand, within AO353_24640 at 5421.982 kb on + strand, within AO353_24640 at 5421.983 kb on - strand, within AO353_24640 at 5421.983 kb on - strand, within AO353_24640 at 5421.983 kb on - strand, within AO353_24640 at 5421.983 kb on - strand, within AO353_24640 at 5421.993 kb on + strand, within AO353_24640 at 5422.163 kb on + strand, within AO353_24640 at 5422.163 kb on + strand, within AO353_24640 at 5422.163 kb on + strand, within AO353_24640 at 5422.163 kb on + strand, within AO353_24640 at 5422.163 kb on + strand, within AO353_24640 at 5422.163 kb on + strand, within AO353_24640 at 5422.163 kb on + strand, within AO353_24640 at 5422.164 kb on - strand, within AO353_24640 at 5422.164 kb on - strand, within AO353_24640 at 5422.164 kb on - strand, within AO353_24640 at 5422.164 kb on - strand, within AO353_24640 at 5422.386 kb on + strand at 5422.386 kb on + strand at 5422.386 kb on + strand at 5422.386 kb on + strand at 5422.386 kb on + strand at 5422.386 kb on + strand at 5422.387 kb on - strand at 5422.387 kb on - strand at 5422.387 kb on - strand at 5422.387 kb on - strand at 5422.387 kb on - strand at 5422.387 kb on - strand at 5422.387 kb on - strand at 5422.412 kb on + strand at 5422.412 kb on + strand at 5422.413 kb on - strand at 5422.413 kb on - strand at 5422.564 kb on + strand, within AO353_24645 at 5422.565 kb on - strand, within AO353_24645 at 5422.565 kb on - strand, within AO353_24645 at 5422.565 kb on - strand, within AO353_24645 at 5422.565 kb on - strand, within AO353_24645 at 5422.640 kb on + strand, within AO353_24645 at 5422.640 kb on + strand, within AO353_24645 at 5422.641 kb on - strand, within AO353_24645 at 5422.641 kb on - strand, within AO353_24645 at 5422.789 kb on + strand, within AO353_24645 at 5422.789 kb on + strand, within AO353_24645 at 5422.799 kb on - strand, within AO353_24645 at 5422.812 kb on + strand, within AO353_24645 at 5422.842 kb on - strand, within AO353_24645 at 5422.892 kb on - strand, within AO353_24645 at 5422.907 kb on - strand, within AO353_24645 at 5422.908 kb on + strand at 5422.909 kb on - strand, within AO353_24645 at 5422.909 kb on - strand, within AO353_24645 at 5422.909 kb on - strand, within AO353_24645 at 5422.952 kb on - strand, within AO353_24645 at 5422.954 kb on + strand, within AO353_24645 at 5422.955 kb on - strand, within AO353_24645 at 5423.064 kb on + strand, within AO353_24645 at 5423.064 kb on + strand, within AO353_24645 at 5423.064 kb on + strand, within AO353_24645 at 5423.064 kb on + strand, within AO353_24645 at 5423.064 kb on + strand, within AO353_24645 at 5423.065 kb on - strand, within AO353_24645 at 5423.065 kb on - strand, within AO353_24645 at 5423.065 kb on - strand, within AO353_24645 at 5423.065 kb on - strand, within AO353_24645 at 5423.278 kb on + strand, within AO353_24645 at 5423.278 kb on + strand, within AO353_24645 at 5423.279 kb on - strand, within AO353_24645 at 5423.279 kb on - strand, within AO353_24645 at 5423.281 kb on - strand, within AO353_24645 at 5423.306 kb on - strand, within AO353_24645 at 5423.308 kb on + strand, within AO353_24645 at 5423.309 kb on - strand, within AO353_24645 at 5423.309 kb on - strand, within AO353_24645 at 5423.396 kb on + strand, within AO353_24645 at 5423.396 kb on + strand, within AO353_24645 at 5423.397 kb on - strand, within AO353_24645 at 5423.442 kb on - strand, within AO353_24645 at 5423.442 kb on - strand, within AO353_24645 at 5423.442 kb on - strand, within AO353_24645 at 5423.493 kb on - strand, within AO353_24645 at 5423.531 kb on - strand, within AO353_24645 at 5423.605 kb on - strand, within AO353_24645 at 5423.605 kb on - strand, within AO353_24645 at 5423.605 kb on - strand, within AO353_24645 at 5423.607 kb on + strand at 5423.608 kb on - strand, within AO353_24645 at 5423.608 kb on - strand, within AO353_24645 at 5423.608 kb on - strand, within AO353_24645 at 5423.608 kb on - strand at 5423.612 kb on + strand, within AO353_24645 at 5423.612 kb on + strand, within AO353_24645 at 5423.613 kb on - strand, within AO353_24645 at 5423.613 kb on - strand, within AO353_24645 at 5423.613 kb on - strand, within AO353_24645 at 5423.613 kb on - strand, within AO353_24645 at 5423.616 kb on + strand, within AO353_24645 at 5423.617 kb on - strand, within AO353_24645 at 5423.695 kb on + strand, within AO353_24645 at 5423.720 kb on - strand, within AO353_24645 at 5423.720 kb on - strand, within AO353_24645 at 5423.720 kb on - strand, within AO353_24645 at 5423.720 kb on - strand, within AO353_24645 at 5423.720 kb on - strand, within AO353_24645 at 5423.725 kb on + strand, within AO353_24645 at 5423.725 kb on + strand, within AO353_24645 at 5423.725 kb on + strand, within AO353_24645 at 5423.726 kb on - strand, within AO353_24645 at 5423.729 kb on + strand, within AO353_24645 at 5423.729 kb on + strand, within AO353_24645 at 5423.730 kb on - strand, within AO353_24645 at 5423.733 kb on + strand, within AO353_24645 at 5423.733 kb on + strand, within AO353_24645 at 5423.733 kb on + strand, within AO353_24645 at 5423.733 kb on + strand, within AO353_24645 at 5423.734 kb on - strand, within AO353_24645 at 5423.734 kb on - strand, within AO353_24645 at 5423.734 kb on - strand, within AO353_24645 at 5423.846 kb on + strand, within AO353_24645 at 5423.878 kb on - strand, within AO353_24645 at 5423.888 kb on - strand, within AO353_24645 at 5423.888 kb on - strand, within AO353_24645 at 5424.020 kb on + strand, within AO353_24645 at 5424.020 kb on + strand, within AO353_24645 at 5424.020 kb on + strand, within AO353_24645 at 5424.078 kb on + strand at 5424.150 kb on + strand at 5424.151 kb on - strand at 5424.318 kb on + strand at 5424.319 kb on - strand at 5424.323 kb on - strand at 5424.400 kb on - strand at 5424.568 kb on + strand, within AO353_24650 at 5424.645 kb on + strand, within AO353_24650 at 5424.645 kb on + strand, within AO353_24650 at 5424.685 kb on - strand, within AO353_24650 at 5424.685 kb on - strand, within AO353_24650 at 5424.685 kb on - strand, within AO353_24650 at 5424.748 kb on - strand, within AO353_24650 at 5424.791 kb on - strand, within AO353_24650 at 5424.791 kb on - strand, within AO353_24650 at 5424.795 kb on + strand, within AO353_24650 at 5424.795 kb on + strand, within AO353_24650 at 5424.796 kb on - strand, within AO353_24650 at 5424.796 kb on - strand, within AO353_24650 at 5424.796 kb on - strand, within AO353_24650 at 5424.796 kb on - strand, within AO353_24650 at 5424.796 kb on - strand, within AO353_24650 at 5424.796 kb on - strand, within AO353_24650 at 5424.835 kb on - strand, within AO353_24650 at 5424.835 kb on - strand, within AO353_24650 at 5424.954 kb on - strand at 5425.048 kb on - strand, within AO353_24650 at 5425.048 kb on - strand, within AO353_24650 at 5425.060 kb on - strand, within AO353_24650 at 5425.131 kb on + strand, within AO353_24650 at 5425.131 kb on + strand, within AO353_24650 at 5425.132 kb on - strand, within AO353_24650 at 5425.132 kb on - strand, within AO353_24650 at 5425.213 kb on - strand, within AO353_24650
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.25 vol% remove 5,421,348 + AO353_24635 0.83 -1.6 5,421,348 + AO353_24635 0.83 +1.3 5,421,348 + AO353_24635 0.83 -0.1 5,421,349 - AO353_24635 0.83 +2.6 5,421,349 - AO353_24635 0.83 +0.3 5,421,411 - +0.3 5,421,472 - -0.3 5,421,477 + -0.2 5,421,478 - +0.2 5,421,478 - -2.0 5,421,480 + +0.3 5,421,480 + +0.8 5,421,584 + +0.6 5,421,584 + +0.8 5,421,585 - +0.5 5,421,587 + +0.2 5,421,587 + -0.0 5,421,587 + +0.6 5,421,587 + -0.4 5,421,587 + -0.2 5,421,587 + +0.6 5,421,588 - -0.5 5,421,588 - +0.1 5,421,617 + +0.4 5,421,618 - -0.2 5,421,678 - -0.2 5,421,678 - +1.6 5,421,678 - -0.2 5,421,725 + +1.8 5,421,726 - +0.3 5,421,726 - -0.5 5,421,726 - -0.0 5,421,776 + +2.2 5,421,776 + +1.3 5,421,776 + -0.1 5,421,777 - +0.6 5,421,777 - -0.9 5,421,799 + -1.2 5,421,799 + +0.4 5,421,799 + +1.3 5,421,800 - -0.2 5,421,828 + -1.2 5,421,828 + -0.4 5,421,828 + +0.2 5,421,828 + -1.4 5,421,828 + -1.4 5,421,828 + +0.2 5,421,829 - -0.7 5,421,829 - -0.0 5,421,829 - -0.6 5,421,832 + -0.2 5,421,832 + +1.6 5,421,832 + -0.2 5,421,833 - -0.6 5,421,833 - +1.2 5,421,899 + -2.0 5,421,899 + -0.7 5,421,982 + AO353_24640 0.14 -0.4 5,421,982 + AO353_24640 0.14 -0.4 5,421,982 + AO353_24640 0.14 -1.2 5,421,983 - AO353_24640 0.15 +0.6 5,421,983 - AO353_24640 0.15 -0.9 5,421,983 - AO353_24640 0.15 -0.9 5,421,983 - AO353_24640 0.15 -0.0 5,421,993 + AO353_24640 0.17 -2.7 5,422,163 + AO353_24640 0.58 +0.3 5,422,163 + AO353_24640 0.58 +0.4 5,422,163 + AO353_24640 0.58 -2.7 5,422,163 + AO353_24640 0.58 -2.4 5,422,163 + AO353_24640 0.58 +0.9 5,422,163 + AO353_24640 0.58 +0.2 5,422,163 + AO353_24640 0.58 +0.6 5,422,164 - AO353_24640 0.58 -0.0 5,422,164 - AO353_24640 0.58 -1.0 5,422,164 - AO353_24640 0.58 -0.4 5,422,164 - AO353_24640 0.58 -1.0 5,422,386 + -0.6 5,422,386 + -0.8 5,422,386 + +0.8 5,422,386 + +1.6 5,422,386 + +1.5 5,422,386 + -0.2 5,422,387 - -0.4 5,422,387 - -0.4 5,422,387 - +0.8 5,422,387 - +1.2 5,422,387 - -0.4 5,422,387 - +1.3 5,422,387 - -0.8 5,422,412 + -1.2 5,422,412 + +1.2 5,422,413 - -0.5 5,422,413 - -1.4 5,422,564 + AO353_24645 0.12 +0.2 5,422,565 - AO353_24645 0.12 -1.0 5,422,565 - AO353_24645 0.12 -0.1 5,422,565 - AO353_24645 0.12 +0.6 5,422,565 - AO353_24645 0.12 +0.6 5,422,640 + AO353_24645 0.16 -2.4 5,422,640 + AO353_24645 0.16 +1.0 5,422,641 - AO353_24645 0.16 -0.6 5,422,641 - AO353_24645 0.16 -0.2 5,422,789 + AO353_24645 0.24 -0.1 5,422,789 + AO353_24645 0.24 -1.0 5,422,799 - AO353_24645 0.25 +0.6 5,422,812 + AO353_24645 0.25 -0.4 5,422,842 - AO353_24645 0.27 +1.5 5,422,892 - AO353_24645 0.30 +0.3 5,422,907 - AO353_24645 0.30 -1.1 5,422,908 + -0.4 5,422,909 - AO353_24645 0.30 -1.0 5,422,909 - AO353_24645 0.30 +1.0 5,422,909 - AO353_24645 0.30 -1.6 5,422,952 - AO353_24645 0.33 -0.0 5,422,954 + AO353_24645 0.33 +1.2 5,422,955 - AO353_24645 0.33 -0.4 5,423,064 + AO353_24645 0.39 +0.3 5,423,064 + AO353_24645 0.39 -0.2 5,423,064 + AO353_24645 0.39 -0.4 5,423,064 + AO353_24645 0.39 +1.5 5,423,064 + AO353_24645 0.39 -0.8 5,423,065 - AO353_24645 0.39 +0.6 5,423,065 - AO353_24645 0.39 +0.8 5,423,065 - AO353_24645 0.39 -0.5 5,423,065 - AO353_24645 0.39 +1.0 5,423,278 + AO353_24645 0.50 -2.7 5,423,278 + AO353_24645 0.50 +0.4 5,423,279 - AO353_24645 0.50 +0.8 5,423,279 - AO353_24645 0.50 -1.3 5,423,281 - AO353_24645 0.50 -1.2 5,423,306 - AO353_24645 0.52 -0.4 5,423,308 + AO353_24645 0.52 -0.1 5,423,309 - AO353_24645 0.52 +0.8 5,423,309 - AO353_24645 0.52 -1.2 5,423,396 + AO353_24645 0.56 +1.3 5,423,396 + AO353_24645 0.56 +1.2 5,423,397 - AO353_24645 0.56 -1.7 5,423,442 - AO353_24645 0.59 -0.7 5,423,442 - AO353_24645 0.59 -1.0 5,423,442 - AO353_24645 0.59 -0.6 5,423,493 - AO353_24645 0.61 -0.1 5,423,531 - AO353_24645 0.63 -0.5 5,423,605 - AO353_24645 0.67 -0.7 5,423,605 - AO353_24645 0.67 -1.2 5,423,605 - AO353_24645 0.67 +0.4 5,423,607 + -2.0 5,423,608 - AO353_24645 0.68 -0.3 5,423,608 - AO353_24645 0.68 -0.4 5,423,608 - AO353_24645 0.68 -0.2 5,423,608 - +1.6 5,423,612 + AO353_24645 0.68 +0.6 5,423,612 + AO353_24645 0.68 -1.0 5,423,613 - AO353_24645 0.68 -1.0 5,423,613 - AO353_24645 0.68 -0.4 5,423,613 - AO353_24645 0.68 +1.0 5,423,613 - AO353_24645 0.68 +0.3 5,423,616 + AO353_24645 0.68 -0.2 5,423,617 - AO353_24645 0.68 -1.4 5,423,695 + AO353_24645 0.72 +2.2 5,423,720 - AO353_24645 0.74 -1.9 5,423,720 - AO353_24645 0.74 -0.4 5,423,720 - AO353_24645 0.74 +2.2 5,423,720 - AO353_24645 0.74 -0.2 5,423,720 - AO353_24645 0.74 -0.0 5,423,725 + AO353_24645 0.74 +0.6 5,423,725 + AO353_24645 0.74 +0.6 5,423,725 + AO353_24645 0.74 +1.0 5,423,726 - AO353_24645 0.74 -0.2 5,423,729 + AO353_24645 0.74 +0.6 5,423,729 + AO353_24645 0.74 +0.6 5,423,730 - AO353_24645 0.74 -0.0 5,423,733 + AO353_24645 0.74 +0.3 5,423,733 + AO353_24645 0.74 -0.5 5,423,733 + AO353_24645 0.74 -1.0 5,423,733 + AO353_24645 0.74 -2.0 5,423,734 - AO353_24645 0.74 -0.4 5,423,734 - AO353_24645 0.74 +1.3 5,423,734 - AO353_24645 0.74 -0.4 5,423,846 + AO353_24645 0.80 +1.9 5,423,878 - AO353_24645 0.82 +0.6 5,423,888 - AO353_24645 0.82 -1.0 5,423,888 - AO353_24645 0.82 -0.4 5,424,020 + AO353_24645 0.89 +1.6 5,424,020 + AO353_24645 0.89 -1.0 5,424,020 + AO353_24645 0.89 -0.4 5,424,078 + -1.1 5,424,150 + -0.2 5,424,151 - +1.1 5,424,318 + -0.6 5,424,319 - -1.2 5,424,323 - -1.7 5,424,400 - +1.3 5,424,568 + AO353_24650 0.10 +2.4 5,424,645 + AO353_24650 0.15 -1.6 5,424,645 + AO353_24650 0.15 +1.0 5,424,685 - AO353_24650 0.17 -0.4 5,424,685 - AO353_24650 0.17 +1.2 5,424,685 - AO353_24650 0.17 -1.2 5,424,748 - AO353_24650 0.20 +0.2 5,424,791 - AO353_24650 0.23 +1.3 5,424,791 - AO353_24650 0.23 -1.0 5,424,795 + AO353_24650 0.23 -2.3 5,424,795 + AO353_24650 0.23 +0.8 5,424,796 - AO353_24650 0.23 +0.6 5,424,796 - AO353_24650 0.23 +0.9 5,424,796 - AO353_24650 0.23 -0.1 5,424,796 - AO353_24650 0.23 +1.0 5,424,796 - AO353_24650 0.23 -0.4 5,424,796 - AO353_24650 0.23 -1.6 5,424,835 - AO353_24650 0.25 +3.4 5,424,835 - AO353_24650 0.25 -0.8 5,424,954 - +1.9 5,425,048 - AO353_24650 0.37 +0.6 5,425,048 - AO353_24650 0.37 +0.6 5,425,060 - AO353_24650 0.38 -0.4 5,425,131 + AO353_24650 0.42 -2.2 5,425,131 + AO353_24650 0.42 +0.4 5,425,132 - AO353_24650 0.42 -1.9 5,425,132 - AO353_24650 0.42 +1.6 5,425,213 - AO353_24650 0.47 +1.4
Or see this region's nucleotide sequence