Experiment: Furfuryl Alcohol 0.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23900 and AO353_23905 are separated by 180 nucleotides AO353_23905 and AO353_23910 are separated by 2 nucleotides AO353_23910 and AO353_23915 are separated by 179 nucleotides
AO353_23900: AO353_23900 - glycosyltransferase, at 5,244,128 to 5,245,423
_23900
AO353_23905: AO353_23905 - GntR family transcriptional regulator, at 5,245,604 to 5,246,482
_23905
AO353_23910: AO353_23910 - response regulator, at 5,246,485 to 5,246,847
_23910
AO353_23915: AO353_23915 - chemotaxis protein CheY, at 5,247,027 to 5,250,494
_23915
Position (kb) 5245
5246
5247 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5244.640 kb on + strand, within AO353_23900 at 5244.640 kb on + strand, within AO353_23900 at 5244.640 kb on + strand, within AO353_23900 at 5244.641 kb on - strand, within AO353_23900 at 5244.642 kb on + strand, within AO353_23900 at 5244.643 kb on - strand at 5244.643 kb on - strand, within AO353_23900 at 5244.643 kb on - strand, within AO353_23900 at 5244.643 kb on - strand, within AO353_23900 at 5244.651 kb on + strand, within AO353_23900 at 5244.652 kb on - strand, within AO353_23900 at 5244.652 kb on - strand, within AO353_23900 at 5244.652 kb on - strand, within AO353_23900 at 5244.655 kb on + strand, within AO353_23900 at 5244.655 kb on + strand at 5244.655 kb on + strand, within AO353_23900 at 5244.655 kb on + strand, within AO353_23900 at 5244.655 kb on + strand, within AO353_23900 at 5244.656 kb on - strand, within AO353_23900 at 5244.656 kb on - strand, within AO353_23900 at 5244.656 kb on - strand, within AO353_23900 at 5244.656 kb on - strand, within AO353_23900 at 5245.091 kb on + strand, within AO353_23900 at 5245.198 kb on + strand, within AO353_23900 at 5245.316 kb on + strand at 5245.478 kb on + strand at 5245.478 kb on + strand at 5245.499 kb on + strand at 5245.499 kb on + strand at 5245.499 kb on + strand at 5245.499 kb on + strand at 5245.500 kb on - strand at 5245.530 kb on + strand at 5245.540 kb on + strand at 5245.540 kb on + strand at 5245.541 kb on - strand at 5245.541 kb on - strand at 5245.541 kb on - strand at 5245.541 kb on - strand at 5245.541 kb on - strand at 5245.674 kb on + strand at 5245.675 kb on - strand at 5245.758 kb on - strand at 5245.758 kb on - strand, within AO353_23905 at 5245.817 kb on - strand, within AO353_23905 at 5245.877 kb on + strand, within AO353_23905 at 5245.877 kb on + strand, within AO353_23905 at 5245.878 kb on - strand, within AO353_23905 at 5246.244 kb on + strand, within AO353_23905 at 5246.245 kb on - strand, within AO353_23905 at 5246.245 kb on - strand, within AO353_23905 at 5246.245 kb on - strand, within AO353_23905 at 5246.266 kb on + strand, within AO353_23905 at 5246.266 kb on + strand, within AO353_23905 at 5246.267 kb on - strand, within AO353_23905 at 5246.326 kb on + strand, within AO353_23905 at 5246.327 kb on - strand, within AO353_23905 at 5246.452 kb on + strand at 5246.452 kb on + strand at 5246.494 kb on - strand at 5246.575 kb on - strand, within AO353_23910 at 5246.575 kb on - strand, within AO353_23910 at 5246.575 kb on - strand, within AO353_23910 at 5246.777 kb on - strand, within AO353_23910 at 5246.777 kb on - strand, within AO353_23910 at 5246.805 kb on + strand, within AO353_23910 at 5246.806 kb on - strand, within AO353_23910 at 5246.819 kb on - strand at 5246.891 kb on + strand at 5246.891 kb on + strand at 5246.891 kb on + strand at 5246.891 kb on + strand at 5246.891 kb on + strand at 5246.891 kb on + strand at 5246.892 kb on - strand at 5246.892 kb on - strand at 5246.892 kb on - strand at 5246.892 kb on - strand at 5246.961 kb on + strand at 5246.962 kb on - strand at 5247.003 kb on - strand at 5247.003 kb on - strand at 5247.144 kb on + strand at 5247.144 kb on + strand at 5247.144 kb on + strand at 5247.144 kb on + strand at 5247.144 kb on + strand at 5247.144 kb on + strand at 5247.144 kb on + strand at 5247.144 kb on + strand at 5247.145 kb on - strand at 5247.145 kb on - strand at 5247.145 kb on - strand at 5247.145 kb on - strand at 5247.145 kb on - strand at 5247.145 kb on - strand at 5247.409 kb on - strand, within AO353_23915
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.25 vol% remove 5,244,640 + AO353_23900 0.40 -0.0 5,244,640 + AO353_23900 0.40 +1.0 5,244,640 + AO353_23900 0.40 -0.9 5,244,641 - AO353_23900 0.40 -1.2 5,244,642 + AO353_23900 0.40 +0.8 5,244,643 - +1.3 5,244,643 - AO353_23900 0.40 -2.0 5,244,643 - AO353_23900 0.40 -0.0 5,244,643 - AO353_23900 0.40 +0.6 5,244,651 + AO353_23900 0.40 -0.0 5,244,652 - AO353_23900 0.40 +0.1 5,244,652 - AO353_23900 0.40 -0.0 5,244,652 - AO353_23900 0.40 -0.0 5,244,655 + AO353_23900 0.41 -0.4 5,244,655 + +0.6 5,244,655 + AO353_23900 0.41 -2.7 5,244,655 + AO353_23900 0.41 -0.4 5,244,655 + AO353_23900 0.41 +0.1 5,244,656 - AO353_23900 0.41 -0.1 5,244,656 - AO353_23900 0.41 +0.6 5,244,656 - AO353_23900 0.41 +0.9 5,244,656 - AO353_23900 0.41 -0.2 5,245,091 + AO353_23900 0.74 -0.4 5,245,198 + AO353_23900 0.83 -0.1 5,245,316 + -0.2 5,245,478 + -1.2 5,245,478 + +1.0 5,245,499 + -0.6 5,245,499 + +0.1 5,245,499 + +1.0 5,245,499 + +0.2 5,245,500 - +0.8 5,245,530 + -0.4 5,245,540 + -0.2 5,245,540 + +0.4 5,245,541 - +1.6 5,245,541 - -0.4 5,245,541 - -0.4 5,245,541 - -0.4 5,245,541 - -0.3 5,245,674 + -0.4 5,245,675 - +0.3 5,245,758 - +0.6 5,245,758 - AO353_23905 0.18 -0.4 5,245,817 - AO353_23905 0.24 -2.6 5,245,877 + AO353_23905 0.31 +1.2 5,245,877 + AO353_23905 0.31 -0.4 5,245,878 - AO353_23905 0.31 -1.0 5,246,244 + AO353_23905 0.73 -1.0 5,246,245 - AO353_23905 0.73 -1.0 5,246,245 - AO353_23905 0.73 -0.4 5,246,245 - AO353_23905 0.73 -0.0 5,246,266 + AO353_23905 0.75 -1.5 5,246,266 + AO353_23905 0.75 +1.6 5,246,267 - AO353_23905 0.75 -0.0 5,246,326 + AO353_23905 0.82 -0.7 5,246,327 - AO353_23905 0.82 -1.3 5,246,452 + +0.6 5,246,452 + +1.2 5,246,494 - +0.6 5,246,575 - AO353_23910 0.25 +0.4 5,246,575 - AO353_23910 0.25 +2.4 5,246,575 - AO353_23910 0.25 -2.9 5,246,777 - AO353_23910 0.80 -1.0 5,246,777 - AO353_23910 0.80 +0.7 5,246,805 + AO353_23910 0.88 -0.4 5,246,806 - AO353_23910 0.88 -0.4 5,246,819 - -0.2 5,246,891 + -0.7 5,246,891 + +2.2 5,246,891 + +1.3 5,246,891 + +1.6 5,246,891 + +0.6 5,246,891 + -1.0 5,246,892 - +0.6 5,246,892 - +2.2 5,246,892 - -0.4 5,246,892 - +0.6 5,246,961 + +1.3 5,246,962 - -0.6 5,247,003 - +1.0 5,247,003 - +1.9 5,247,144 + +1.9 5,247,144 + +0.6 5,247,144 + +2.2 5,247,144 + +1.5 5,247,144 + -0.4 5,247,144 + -0.8 5,247,144 + -0.6 5,247,144 + -1.0 5,247,145 - +0.1 5,247,145 - -2.2 5,247,145 - -0.0 5,247,145 - -1.0 5,247,145 - +0.6 5,247,145 - +0.3 5,247,409 - AO353_23915 0.11 +0.2
Or see this region's nucleotide sequence