Experiment: Furfuryl Alcohol 0.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23210 and AO353_23215 are separated by 187 nucleotides AO353_23215 and AO353_23220 are separated by 40 nucleotides AO353_23220 and AO353_23225 are separated by 235 nucleotides
AO353_23210: AO353_23210 - hydroperoxidase, at 5,091,946 to 5,094,153
_23210
AO353_23215: AO353_23215 - calpastatin, at 5,094,341 to 5,094,766
_23215
AO353_23220: AO353_23220 - hypothetical protein, at 5,094,807 to 5,095,106
_23220
AO353_23225: AO353_23225 - alpha/beta hydrolase, at 5,095,342 to 5,096,409
_23225
Position (kb)
5094
5095
5096 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5094.030 kb on + strand at 5094.030 kb on + strand at 5094.061 kb on + strand at 5094.061 kb on + strand at 5094.061 kb on + strand at 5094.061 kb on + strand at 5094.061 kb on + strand at 5094.062 kb on - strand at 5094.070 kb on - strand at 5094.151 kb on + strand at 5094.253 kb on + strand at 5094.253 kb on + strand at 5094.290 kb on - strand at 5094.326 kb on + strand at 5094.326 kb on + strand at 5094.326 kb on + strand at 5094.342 kb on + strand at 5094.343 kb on - strand at 5094.343 kb on - strand at 5094.434 kb on - strand, within AO353_23215 at 5094.443 kb on + strand at 5094.443 kb on + strand, within AO353_23215 at 5094.444 kb on - strand, within AO353_23215 at 5094.573 kb on + strand, within AO353_23215 at 5094.573 kb on + strand, within AO353_23215 at 5094.574 kb on - strand, within AO353_23215 at 5094.574 kb on - strand, within AO353_23215 at 5094.772 kb on + strand at 5094.773 kb on - strand at 5094.773 kb on - strand at 5094.773 kb on - strand at 5094.808 kb on + strand at 5094.872 kb on - strand, within AO353_23220 at 5094.885 kb on - strand, within AO353_23220 at 5094.954 kb on + strand, within AO353_23220 at 5094.968 kb on - strand, within AO353_23220 at 5094.998 kb on - strand, within AO353_23220 at 5095.082 kb on - strand at 5095.120 kb on + strand at 5095.120 kb on + strand at 5095.120 kb on + strand at 5095.142 kb on + strand at 5095.142 kb on + strand at 5095.143 kb on - strand at 5095.152 kb on - strand at 5095.152 kb on - strand at 5095.281 kb on + strand at 5095.281 kb on + strand at 5095.310 kb on - strand at 5095.439 kb on + strand at 5095.439 kb on + strand at 5095.443 kb on + strand at 5095.464 kb on - strand, within AO353_23225 at 5095.464 kb on - strand, within AO353_23225 at 5095.464 kb on - strand, within AO353_23225 at 5095.558 kb on + strand, within AO353_23225 at 5095.558 kb on + strand, within AO353_23225 at 5095.569 kb on - strand, within AO353_23225 at 5095.569 kb on - strand, within AO353_23225 at 5095.607 kb on + strand, within AO353_23225 at 5095.607 kb on + strand, within AO353_23225 at 5095.668 kb on - strand, within AO353_23225 at 5095.668 kb on - strand, within AO353_23225 at 5095.711 kb on + strand, within AO353_23225 at 5095.775 kb on + strand, within AO353_23225 at 5095.776 kb on - strand, within AO353_23225 at 5095.851 kb on - strand, within AO353_23225 at 5095.931 kb on + strand, within AO353_23225 at 5095.932 kb on - strand, within AO353_23225 at 5096.063 kb on + strand, within AO353_23225 at 5096.098 kb on + strand, within AO353_23225 at 5096.098 kb on + strand, within AO353_23225 at 5096.098 kb on + strand, within AO353_23225 at 5096.099 kb on - strand, within AO353_23225 at 5096.099 kb on - strand, within AO353_23225 at 5096.099 kb on - strand, within AO353_23225
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.25 vol% remove 5,094,030 + -0.5 5,094,030 + +0.8 5,094,061 + -2.0 5,094,061 + -2.6 5,094,061 + -0.5 5,094,061 + -0.6 5,094,061 + -1.4 5,094,062 - -0.4 5,094,070 - -1.1 5,094,151 + -0.8 5,094,253 + +0.5 5,094,253 + -1.7 5,094,290 - -0.7 5,094,326 + -1.0 5,094,326 + -0.5 5,094,326 + +1.3 5,094,342 + -0.2 5,094,343 - +0.0 5,094,343 - +0.1 5,094,434 - AO353_23215 0.22 -0.4 5,094,443 + +0.6 5,094,443 + AO353_23215 0.24 +1.0 5,094,444 - AO353_23215 0.24 +1.2 5,094,573 + AO353_23215 0.54 -0.8 5,094,573 + AO353_23215 0.54 +0.3 5,094,574 - AO353_23215 0.55 +0.3 5,094,574 - AO353_23215 0.55 +0.9 5,094,772 + +0.5 5,094,773 - +0.0 5,094,773 - +0.6 5,094,773 - -0.7 5,094,808 + +1.2 5,094,872 - AO353_23220 0.22 +0.1 5,094,885 - AO353_23220 0.26 +2.4 5,094,954 + AO353_23220 0.49 +0.6 5,094,968 - AO353_23220 0.54 +1.0 5,094,998 - AO353_23220 0.64 +0.6 5,095,082 - +1.3 5,095,120 + -0.7 5,095,120 + -0.7 5,095,120 + -0.0 5,095,142 + -0.6 5,095,142 + -0.6 5,095,143 - -0.4 5,095,152 - +0.8 5,095,152 - +2.2 5,095,281 + -1.2 5,095,281 + -0.2 5,095,310 - -1.7 5,095,439 + -1.5 5,095,439 + +0.3 5,095,443 + -1.7 5,095,464 - AO353_23225 0.11 -1.2 5,095,464 - AO353_23225 0.11 +1.3 5,095,464 - AO353_23225 0.11 +0.2 5,095,558 + AO353_23225 0.20 +1.5 5,095,558 + AO353_23225 0.20 +0.0 5,095,569 - AO353_23225 0.21 +1.9 5,095,569 - AO353_23225 0.21 -2.2 5,095,607 + AO353_23225 0.25 -0.3 5,095,607 + AO353_23225 0.25 +1.6 5,095,668 - AO353_23225 0.31 +0.1 5,095,668 - AO353_23225 0.31 +0.1 5,095,711 + AO353_23225 0.35 -0.1 5,095,775 + AO353_23225 0.41 -0.4 5,095,776 - AO353_23225 0.41 +1.1 5,095,851 - AO353_23225 0.48 -0.7 5,095,931 + AO353_23225 0.55 -0.3 5,095,932 - AO353_23225 0.55 +0.6 5,096,063 + AO353_23225 0.68 -0.4 5,096,098 + AO353_23225 0.71 -1.6 5,096,098 + AO353_23225 0.71 -1.4 5,096,098 + AO353_23225 0.71 -0.4 5,096,099 - AO353_23225 0.71 -0.7 5,096,099 - AO353_23225 0.71 -0.6 5,096,099 - AO353_23225 0.71 +2.4
Or see this region's nucleotide sequence