Experiment: Furfuryl Alcohol 0.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22410 and AO353_22415 are separated by 90 nucleotides AO353_22415 and AO353_22420 overlap by 17 nucleotides
AO353_22410: AO353_22410 - pyrroloquinoline quinone biosynthesis protein PqqE, at 4,909,018 to 4,910,160
_22410
AO353_22415: AO353_22415 - alcohol dehydrogenase, at 4,910,251 to 4,911,414
_22415
AO353_22420: AO353_22420 - histidine kinase, at 4,911,398 to 4,913,125
_22420
Position (kb)
4910
4911
4912 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4909.286 kb on - strand, within AO353_22410 at 4909.288 kb on + strand, within AO353_22410 at 4909.288 kb on + strand, within AO353_22410 at 4909.288 kb on + strand, within AO353_22410 at 4909.289 kb on - strand, within AO353_22410 at 4909.289 kb on - strand, within AO353_22410 at 4909.289 kb on - strand, within AO353_22410 at 4909.289 kb on - strand, within AO353_22410 at 4909.289 kb on - strand, within AO353_22410 at 4909.594 kb on + strand, within AO353_22410 at 4909.594 kb on + strand, within AO353_22410 at 4909.595 kb on - strand, within AO353_22410 at 4909.595 kb on - strand, within AO353_22410 at 4909.595 kb on - strand, within AO353_22410 at 4909.735 kb on + strand, within AO353_22410 at 4909.736 kb on - strand, within AO353_22410 at 4909.736 kb on - strand, within AO353_22410 at 4909.736 kb on - strand, within AO353_22410 at 4909.736 kb on - strand, within AO353_22410 at 4909.736 kb on - strand, within AO353_22410 at 4909.739 kb on - strand, within AO353_22410 at 4909.791 kb on + strand, within AO353_22410 at 4910.171 kb on - strand at 4910.207 kb on + strand at 4910.207 kb on + strand at 4910.207 kb on + strand at 4910.208 kb on - strand at 4910.208 kb on - strand at 4910.216 kb on + strand at 4910.216 kb on + strand at 4910.219 kb on + strand at 4910.219 kb on + strand at 4910.220 kb on - strand at 4910.220 kb on - strand at 4910.220 kb on - strand at 4910.220 kb on - strand at 4910.220 kb on - strand at 4910.220 kb on - strand at 4910.220 kb on - strand at 4910.226 kb on + strand at 4910.226 kb on + strand at 4910.227 kb on - strand at 4910.227 kb on - strand at 4910.227 kb on - strand at 4910.227 kb on - strand at 4910.278 kb on - strand at 4910.323 kb on - strand at 4910.323 kb on - strand at 4910.323 kb on - strand at 4910.335 kb on + strand at 4910.335 kb on + strand at 4910.335 kb on + strand at 4910.335 kb on + strand at 4910.336 kb on - strand at 4910.336 kb on - strand at 4910.336 kb on - strand at 4910.447 kb on - strand, within AO353_22415 at 4910.447 kb on - strand, within AO353_22415 at 4910.447 kb on - strand, within AO353_22415 at 4910.456 kb on - strand, within AO353_22415 at 4911.140 kb on - strand, within AO353_22415 at 4911.140 kb on - strand, within AO353_22415 at 4911.140 kb on - strand, within AO353_22415 at 4911.398 kb on - strand at 4911.398 kb on - strand at 4911.530 kb on + strand at 4912.055 kb on + strand, within AO353_22420 at 4912.055 kb on + strand, within AO353_22420 at 4912.055 kb on + strand, within AO353_22420 at 4912.056 kb on - strand, within AO353_22420 at 4912.056 kb on - strand, within AO353_22420 at 4912.257 kb on + strand, within AO353_22420 at 4912.257 kb on + strand, within AO353_22420 at 4912.257 kb on + strand, within AO353_22420 at 4912.257 kb on + strand, within AO353_22420 at 4912.258 kb on - strand, within AO353_22420 at 4912.258 kb on - strand, within AO353_22420 at 4912.403 kb on - strand, within AO353_22420
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.25 vol% remove 4,909,286 - AO353_22410 0.23 -0.6 4,909,288 + AO353_22410 0.24 -0.9 4,909,288 + AO353_22410 0.24 +2.2 4,909,288 + AO353_22410 0.24 -0.2 4,909,289 - AO353_22410 0.24 -0.8 4,909,289 - AO353_22410 0.24 -0.9 4,909,289 - AO353_22410 0.24 +1.1 4,909,289 - AO353_22410 0.24 +0.7 4,909,289 - AO353_22410 0.24 +0.8 4,909,594 + AO353_22410 0.50 -0.2 4,909,594 + AO353_22410 0.50 -1.0 4,909,595 - AO353_22410 0.50 +0.7 4,909,595 - AO353_22410 0.50 -0.3 4,909,595 - AO353_22410 0.50 -0.3 4,909,735 + AO353_22410 0.63 -1.1 4,909,736 - AO353_22410 0.63 -0.2 4,909,736 - AO353_22410 0.63 -0.5 4,909,736 - AO353_22410 0.63 +1.2 4,909,736 - AO353_22410 0.63 -0.1 4,909,736 - AO353_22410 0.63 +1.4 4,909,739 - AO353_22410 0.63 -0.3 4,909,791 + AO353_22410 0.68 -0.1 4,910,171 - -1.9 4,910,207 + +0.2 4,910,207 + +0.8 4,910,207 + +0.5 4,910,208 - -0.0 4,910,208 - -0.9 4,910,216 + -2.3 4,910,216 + +0.7 4,910,219 + +2.2 4,910,219 + -0.3 4,910,220 - +1.4 4,910,220 - -1.3 4,910,220 - -0.8 4,910,220 - +0.2 4,910,220 - +0.7 4,910,220 - +0.7 4,910,220 - +0.1 4,910,226 + -2.2 4,910,226 + +0.9 4,910,227 - -1.1 4,910,227 - -0.1 4,910,227 - +2.8 4,910,227 - -0.5 4,910,278 - +0.4 4,910,323 - -0.6 4,910,323 - -1.9 4,910,323 - +1.7 4,910,335 + -0.2 4,910,335 + -1.7 4,910,335 + -0.8 4,910,335 + +0.1 4,910,336 - +0.2 4,910,336 - -0.6 4,910,336 - +0.5 4,910,447 - AO353_22415 0.17 -0.5 4,910,447 - AO353_22415 0.17 +1.5 4,910,447 - AO353_22415 0.17 -0.3 4,910,456 - AO353_22415 0.18 +0.1 4,911,140 - AO353_22415 0.76 +0.1 4,911,140 - AO353_22415 0.76 -0.8 4,911,140 - AO353_22415 0.76 -1.2 4,911,398 - +0.3 4,911,398 - +0.3 4,911,530 + +1.9 4,912,055 + AO353_22420 0.38 -0.3 4,912,055 + AO353_22420 0.38 -1.5 4,912,055 + AO353_22420 0.38 +0.9 4,912,056 - AO353_22420 0.38 -0.2 4,912,056 - AO353_22420 0.38 -0.6 4,912,257 + AO353_22420 0.50 +0.7 4,912,257 + AO353_22420 0.50 -0.1 4,912,257 + AO353_22420 0.50 +1.2 4,912,257 + AO353_22420 0.50 -0.3 4,912,258 - AO353_22420 0.50 -1.2 4,912,258 - AO353_22420 0.50 +0.1 4,912,403 - AO353_22420 0.58 -1.7
Or see this region's nucleotide sequence