Experiment: Furfuryl Alcohol 0.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_20410 and AO353_20415 are separated by 35 nucleotides AO353_20415 and AO353_20420 are separated by 680 nucleotides AO353_20420 and AO353_20425 are separated by 13 nucleotides AO353_20425 and AO353_20430 are separated by 210 nucleotides
AO353_20410: AO353_20410 - hypothetical protein, at 4,487,323 to 4,487,622
_20410
AO353_20415: AO353_20415 - hypothetical protein, at 4,487,658 to 4,487,918
_20415
AO353_20420: AO353_20420 - NADPH-dependent FMN reductase, at 4,488,599 to 4,489,294
_20420
AO353_20425: AO353_20425 - ArsC family transcriptional regulator, at 4,489,308 to 4,489,778
_20425
AO353_20430: AO353_20430 - hypothetical protein, at 4,489,989 to 4,490,477
_20430
Position (kb)
4488
4489
4490 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4487.667 kb on + strand at 4487.667 kb on + strand at 4487.668 kb on - strand at 4487.668 kb on - strand at 4487.668 kb on - strand at 4487.737 kb on + strand, within AO353_20415 at 4487.737 kb on + strand, within AO353_20415 at 4487.737 kb on + strand, within AO353_20415 at 4487.737 kb on + strand, within AO353_20415 at 4487.737 kb on + strand, within AO353_20415 at 4487.737 kb on + strand, within AO353_20415 at 4487.738 kb on - strand, within AO353_20415 at 4487.738 kb on - strand, within AO353_20415 at 4487.738 kb on - strand, within AO353_20415 at 4487.738 kb on - strand, within AO353_20415 at 4487.738 kb on - strand, within AO353_20415 at 4487.738 kb on - strand, within AO353_20415 at 4487.738 kb on - strand, within AO353_20415 at 4487.738 kb on - strand, within AO353_20415 at 4487.916 kb on + strand at 4487.916 kb on + strand at 4487.916 kb on + strand at 4487.917 kb on - strand at 4487.973 kb on - strand at 4488.067 kb on + strand at 4488.067 kb on + strand at 4488.068 kb on - strand at 4488.068 kb on - strand at 4488.068 kb on - strand at 4488.139 kb on + strand at 4488.140 kb on - strand at 4488.140 kb on - strand at 4488.140 kb on - strand at 4488.161 kb on + strand at 4488.162 kb on - strand at 4488.162 kb on - strand at 4488.162 kb on - strand at 4488.162 kb on - strand at 4488.162 kb on - strand at 4488.165 kb on + strand at 4488.166 kb on - strand at 4488.166 kb on - strand at 4488.166 kb on - strand at 4488.166 kb on - strand at 4488.166 kb on - strand at 4488.166 kb on - strand at 4488.208 kb on - strand at 4488.208 kb on - strand at 4488.326 kb on + strand at 4488.326 kb on + strand at 4488.326 kb on + strand at 4488.326 kb on + strand at 4488.327 kb on - strand at 4488.393 kb on + strand at 4488.393 kb on + strand at 4488.394 kb on - strand at 4488.432 kb on + strand at 4488.433 kb on - strand at 4488.433 kb on - strand at 4488.448 kb on + strand at 4488.448 kb on + strand at 4488.449 kb on - strand at 4488.473 kb on + strand at 4488.474 kb on - strand at 4488.483 kb on + strand at 4488.527 kb on + strand at 4488.587 kb on + strand at 4488.587 kb on + strand at 4488.588 kb on - strand at 4488.600 kb on + strand at 4488.600 kb on + strand at 4488.600 kb on + strand at 4488.600 kb on + strand at 4488.601 kb on - strand at 4488.603 kb on - strand at 4488.603 kb on - strand at 4488.742 kb on - strand, within AO353_20420 at 4488.846 kb on - strand, within AO353_20420 at 4488.846 kb on - strand, within AO353_20420 at 4488.959 kb on + strand, within AO353_20420 at 4488.959 kb on + strand, within AO353_20420 at 4488.959 kb on + strand, within AO353_20420 at 4488.959 kb on + strand, within AO353_20420 at 4488.960 kb on - strand, within AO353_20420 at 4488.960 kb on - strand, within AO353_20420 at 4488.960 kb on - strand, within AO353_20420 at 4488.960 kb on - strand, within AO353_20420 at 4488.960 kb on - strand, within AO353_20420 at 4489.200 kb on + strand, within AO353_20420 at 4489.200 kb on + strand, within AO353_20420 at 4489.200 kb on + strand, within AO353_20420 at 4489.200 kb on + strand, within AO353_20420 at 4489.200 kb on + strand, within AO353_20420 at 4489.200 kb on + strand, within AO353_20420 at 4489.200 kb on + strand, within AO353_20420 at 4489.201 kb on - strand, within AO353_20420 at 4489.201 kb on - strand, within AO353_20420 at 4489.201 kb on - strand, within AO353_20420 at 4489.201 kb on - strand, within AO353_20420 at 4489.211 kb on + strand, within AO353_20420 at 4489.211 kb on + strand, within AO353_20420 at 4489.211 kb on + strand, within AO353_20420 at 4489.211 kb on + strand, within AO353_20420 at 4489.211 kb on + strand, within AO353_20420 at 4489.211 kb on + strand, within AO353_20420 at 4489.211 kb on + strand, within AO353_20420 at 4489.212 kb on - strand, within AO353_20420 at 4489.212 kb on - strand, within AO353_20420 at 4489.212 kb on - strand, within AO353_20420 at 4489.212 kb on - strand, within AO353_20420 at 4489.212 kb on - strand, within AO353_20420 at 4489.212 kb on - strand, within AO353_20420 at 4489.309 kb on + strand at 4489.507 kb on + strand, within AO353_20425 at 4489.507 kb on + strand, within AO353_20425 at 4489.508 kb on - strand, within AO353_20425 at 4489.508 kb on - strand, within AO353_20425 at 4489.508 kb on - strand, within AO353_20425 at 4489.508 kb on - strand, within AO353_20425 at 4489.790 kb on + strand at 4489.813 kb on + strand at 4489.813 kb on + strand at 4489.814 kb on - strand at 4489.815 kb on + strand at 4489.832 kb on - strand at 4489.832 kb on - strand at 4489.852 kb on + strand at 4489.852 kb on + strand at 4489.852 kb on + strand at 4489.852 kb on + strand at 4489.853 kb on - strand at 4489.990 kb on + strand at 4489.991 kb on - strand at 4489.991 kb on - strand at 4489.991 kb on - strand at 4489.991 kb on - strand at 4489.991 kb on - strand at 4489.991 kb on - strand at 4489.991 kb on - strand at 4490.010 kb on + strand at 4490.010 kb on + strand at 4490.010 kb on + strand at 4490.011 kb on - strand at 4490.011 kb on - strand at 4490.011 kb on - strand at 4490.011 kb on - strand at 4490.127 kb on + strand, within AO353_20430 at 4490.127 kb on + strand, within AO353_20430 at 4490.127 kb on + strand, within AO353_20430 at 4490.127 kb on + strand, within AO353_20430 at 4490.128 kb on - strand, within AO353_20430 at 4490.128 kb on - strand, within AO353_20430 at 4490.128 kb on - strand, within AO353_20430 at 4490.128 kb on - strand, within AO353_20430 at 4490.128 kb on - strand, within AO353_20430 at 4490.128 kb on - strand, within AO353_20430 at 4490.128 kb on - strand, within AO353_20430 at 4490.131 kb on + strand, within AO353_20430 at 4490.131 kb on + strand, within AO353_20430 at 4490.131 kb on + strand, within AO353_20430 at 4490.131 kb on + strand, within AO353_20430 at 4490.131 kb on + strand, within AO353_20430 at 4490.131 kb on + strand, within AO353_20430 at 4490.131 kb on + strand, within AO353_20430 at 4490.131 kb on + strand, within AO353_20430 at 4490.131 kb on + strand, within AO353_20430 at 4490.132 kb on - strand, within AO353_20430 at 4490.132 kb on - strand, within AO353_20430 at 4490.132 kb on - strand, within AO353_20430 at 4490.132 kb on - strand, within AO353_20430 at 4490.132 kb on - strand, within AO353_20430 at 4490.132 kb on - strand, within AO353_20430 at 4490.132 kb on - strand, within AO353_20430 at 4490.132 kb on - strand, within AO353_20430 at 4490.132 kb on - strand, within AO353_20430 at 4490.132 kb on - strand, within AO353_20430 at 4490.132 kb on - strand, within AO353_20430 at 4490.251 kb on + strand, within AO353_20430 at 4490.251 kb on + strand, within AO353_20430 at 4490.252 kb on - strand, within AO353_20430 at 4490.252 kb on - strand, within AO353_20430 at 4490.252 kb on - strand, within AO353_20430 at 4490.252 kb on - strand, within AO353_20430
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.25 vol% remove 4,487,667 + +0.2 4,487,667 + +0.8 4,487,668 - +0.8 4,487,668 - -0.8 4,487,668 - +0.2 4,487,737 + AO353_20415 0.30 +0.4 4,487,737 + AO353_20415 0.30 +1.2 4,487,737 + AO353_20415 0.30 -0.8 4,487,737 + AO353_20415 0.30 -1.2 4,487,737 + AO353_20415 0.30 -0.2 4,487,737 + AO353_20415 0.30 +1.0 4,487,738 - AO353_20415 0.31 -0.6 4,487,738 - AO353_20415 0.31 -0.8 4,487,738 - AO353_20415 0.31 -0.8 4,487,738 - AO353_20415 0.31 -0.7 4,487,738 - AO353_20415 0.31 +0.6 4,487,738 - AO353_20415 0.31 -1.6 4,487,738 - AO353_20415 0.31 +1.8 4,487,738 - AO353_20415 0.31 +0.5 4,487,916 + +0.2 4,487,916 + +1.8 4,487,916 + -0.6 4,487,917 - +1.2 4,487,973 - -1.7 4,488,067 + +0.2 4,488,067 + -1.2 4,488,068 - -0.2 4,488,068 - +0.2 4,488,068 - -2.2 4,488,139 + -0.2 4,488,140 - +0.1 4,488,140 - -0.6 4,488,140 - -2.0 4,488,161 + -0.4 4,488,162 - +0.4 4,488,162 - +0.4 4,488,162 - +1.0 4,488,162 - -1.8 4,488,162 - +0.8 4,488,165 + +2.4 4,488,166 - -0.8 4,488,166 - -0.4 4,488,166 - -0.0 4,488,166 - +0.1 4,488,166 - +0.4 4,488,166 - +0.2 4,488,208 - +0.8 4,488,208 - -2.4 4,488,326 + +0.2 4,488,326 + -2.6 4,488,326 + +0.8 4,488,326 + -0.2 4,488,327 - -0.2 4,488,393 + -1.2 4,488,393 + +2.6 4,488,394 - -1.9 4,488,432 + -1.7 4,488,433 - +0.3 4,488,433 - -1.0 4,488,448 + -1.4 4,488,448 + -1.8 4,488,449 - -0.8 4,488,473 + -1.9 4,488,474 - +0.4 4,488,483 + -0.2 4,488,527 + -0.4 4,488,587 + -0.8 4,488,587 + +0.8 4,488,588 - -0.6 4,488,600 + -0.6 4,488,600 + -2.0 4,488,600 + -1.0 4,488,600 + -0.9 4,488,601 - +0.6 4,488,603 - -0.5 4,488,603 - +1.1 4,488,742 - AO353_20420 0.21 +2.4 4,488,846 - AO353_20420 0.35 +0.5 4,488,846 - AO353_20420 0.35 -1.4 4,488,959 + AO353_20420 0.52 -0.0 4,488,959 + AO353_20420 0.52 +1.8 4,488,959 + AO353_20420 0.52 -1.5 4,488,959 + AO353_20420 0.52 +1.4 4,488,960 - AO353_20420 0.52 -0.2 4,488,960 - AO353_20420 0.52 -1.5 4,488,960 - AO353_20420 0.52 -1.2 4,488,960 - AO353_20420 0.52 +1.3 4,488,960 - AO353_20420 0.52 +0.1 4,489,200 + AO353_20420 0.86 +0.8 4,489,200 + AO353_20420 0.86 +3.2 4,489,200 + AO353_20420 0.86 +0.1 4,489,200 + AO353_20420 0.86 +0.3 4,489,200 + AO353_20420 0.86 -0.7 4,489,200 + AO353_20420 0.86 +1.8 4,489,200 + AO353_20420 0.86 -1.5 4,489,201 - AO353_20420 0.86 +1.1 4,489,201 - AO353_20420 0.86 +0.8 4,489,201 - AO353_20420 0.86 +1.2 4,489,201 - AO353_20420 0.86 -0.2 4,489,211 + AO353_20420 0.88 -0.2 4,489,211 + AO353_20420 0.88 +1.4 4,489,211 + AO353_20420 0.88 +0.0 4,489,211 + AO353_20420 0.88 +0.4 4,489,211 + AO353_20420 0.88 +0.9 4,489,211 + AO353_20420 0.88 +0.8 4,489,211 + AO353_20420 0.88 +0.8 4,489,212 - AO353_20420 0.88 +0.6 4,489,212 - AO353_20420 0.88 +0.7 4,489,212 - AO353_20420 0.88 +0.1 4,489,212 - AO353_20420 0.88 -0.6 4,489,212 - AO353_20420 0.88 -1.7 4,489,212 - AO353_20420 0.88 +3.4 4,489,309 + +0.0 4,489,507 + AO353_20425 0.42 +0.8 4,489,507 + AO353_20425 0.42 -1.8 4,489,508 - AO353_20425 0.42 -0.6 4,489,508 - AO353_20425 0.42 -0.2 4,489,508 - AO353_20425 0.42 +1.2 4,489,508 - AO353_20425 0.42 -2.7 4,489,790 + -0.5 4,489,813 + -0.2 4,489,813 + -0.1 4,489,814 - +0.0 4,489,815 + +1.9 4,489,832 - +0.8 4,489,832 - -0.2 4,489,852 + -0.2 4,489,852 + +1.8 4,489,852 + +0.5 4,489,852 + -0.6 4,489,853 - +0.6 4,489,990 + -0.4 4,489,991 - -0.6 4,489,991 - +0.2 4,489,991 - +1.0 4,489,991 - +0.8 4,489,991 - -0.0 4,489,991 - +1.2 4,489,991 - -0.5 4,490,010 + -0.5 4,490,010 + -0.8 4,490,010 + -1.6 4,490,011 - -2.0 4,490,011 - -0.5 4,490,011 - -0.8 4,490,011 - +0.8 4,490,127 + AO353_20430 0.28 +0.1 4,490,127 + AO353_20430 0.28 +0.2 4,490,127 + AO353_20430 0.28 +0.3 4,490,127 + AO353_20430 0.28 -0.2 4,490,128 - AO353_20430 0.28 +1.8 4,490,128 - AO353_20430 0.28 +0.4 4,490,128 - AO353_20430 0.28 -0.4 4,490,128 - AO353_20430 0.28 -2.0 4,490,128 - AO353_20430 0.28 +0.6 4,490,128 - AO353_20430 0.28 -0.2 4,490,128 - AO353_20430 0.28 -1.8 4,490,131 + AO353_20430 0.29 -0.2 4,490,131 + AO353_20430 0.29 +0.0 4,490,131 + AO353_20430 0.29 -0.1 4,490,131 + AO353_20430 0.29 -0.8 4,490,131 + AO353_20430 0.29 +1.0 4,490,131 + AO353_20430 0.29 +0.8 4,490,131 + AO353_20430 0.29 +0.4 4,490,131 + AO353_20430 0.29 +0.8 4,490,131 + AO353_20430 0.29 +0.5 4,490,132 - AO353_20430 0.29 +0.8 4,490,132 - AO353_20430 0.29 -1.8 4,490,132 - AO353_20430 0.29 -0.2 4,490,132 - AO353_20430 0.29 +0.2 4,490,132 - AO353_20430 0.29 +0.2 4,490,132 - AO353_20430 0.29 +0.3 4,490,132 - AO353_20430 0.29 -0.5 4,490,132 - AO353_20430 0.29 -1.8 4,490,132 - AO353_20430 0.29 -0.2 4,490,132 - AO353_20430 0.29 -0.3 4,490,132 - AO353_20430 0.29 +2.2 4,490,251 + AO353_20430 0.54 -0.4 4,490,251 + AO353_20430 0.54 -1.2 4,490,252 - AO353_20430 0.54 -0.4 4,490,252 - AO353_20430 0.54 -0.0 4,490,252 - AO353_20430 0.54 +0.3 4,490,252 - AO353_20430 0.54 -0.7
Or see this region's nucleotide sequence