Experiment: Furfuryl Alcohol 0.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_19280 and AO353_19285 are separated by 566 nucleotides AO353_19285 and AO353_19290 are separated by 101 nucleotides AO353_19290 and AO353_19295 are separated by 69 nucleotides
AO353_19280: AO353_19280 - hypothetical protein, at 4,226,153 to 4,226,623
_19280
AO353_19285: AO353_19285 - chemotaxis protein CheW, at 4,227,190 to 4,228,125
_19285
AO353_19290: AO353_19290 - molybdenum cofactor sulfurase, at 4,228,227 to 4,229,033
_19290
AO353_19295: AO353_19295 - hypothetical protein, at 4,229,103 to 4,229,387
_19295
Position (kb)
4227
4228
4229 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4226.258 kb on + strand, within AO353_19280 at 4226.258 kb on + strand, within AO353_19280 at 4226.258 kb on + strand, within AO353_19280 at 4226.258 kb on + strand, within AO353_19280 at 4226.259 kb on - strand, within AO353_19280 at 4226.608 kb on + strand at 4226.680 kb on + strand at 4226.680 kb on + strand at 4226.680 kb on + strand at 4226.681 kb on - strand at 4226.681 kb on - strand at 4226.685 kb on + strand at 4226.685 kb on + strand at 4226.685 kb on + strand at 4226.685 kb on + strand at 4226.685 kb on + strand at 4226.686 kb on - strand at 4226.686 kb on - strand at 4226.711 kb on + strand at 4226.834 kb on + strand at 4226.834 kb on + strand at 4226.834 kb on + strand at 4226.834 kb on + strand at 4226.834 kb on + strand at 4226.834 kb on + strand at 4226.834 kb on + strand at 4226.834 kb on + strand at 4226.835 kb on - strand at 4226.835 kb on - strand at 4226.878 kb on + strand at 4226.878 kb on + strand at 4226.878 kb on + strand at 4226.878 kb on + strand at 4226.935 kb on + strand at 4226.942 kb on + strand at 4226.959 kb on - strand at 4226.959 kb on - strand at 4227.055 kb on + strand at 4227.067 kb on + strand at 4227.212 kb on + strand at 4227.212 kb on + strand at 4227.212 kb on + strand at 4227.212 kb on + strand at 4227.212 kb on + strand at 4227.212 kb on + strand at 4227.212 kb on + strand at 4227.212 kb on + strand at 4227.213 kb on - strand at 4227.213 kb on - strand at 4227.213 kb on - strand at 4227.213 kb on - strand at 4227.213 kb on - strand at 4227.213 kb on - strand at 4227.213 kb on - strand at 4227.213 kb on - strand at 4227.213 kb on - strand at 4227.284 kb on + strand, within AO353_19285 at 4227.284 kb on + strand, within AO353_19285 at 4227.285 kb on - strand, within AO353_19285 at 4227.285 kb on - strand, within AO353_19285 at 4227.285 kb on - strand, within AO353_19285 at 4227.285 kb on - strand, within AO353_19285 at 4227.285 kb on - strand, within AO353_19285 at 4227.478 kb on + strand, within AO353_19285 at 4227.478 kb on + strand at 4227.479 kb on - strand, within AO353_19285 at 4227.479 kb on - strand, within AO353_19285 at 4227.479 kb on - strand, within AO353_19285 at 4227.479 kb on - strand, within AO353_19285 at 4227.546 kb on + strand, within AO353_19285 at 4227.546 kb on + strand, within AO353_19285 at 4227.547 kb on - strand, within AO353_19285 at 4227.547 kb on - strand, within AO353_19285 at 4227.547 kb on - strand, within AO353_19285 at 4227.547 kb on - strand, within AO353_19285 at 4227.583 kb on + strand, within AO353_19285 at 4227.583 kb on + strand, within AO353_19285 at 4227.583 kb on + strand, within AO353_19285 at 4227.584 kb on - strand, within AO353_19285 at 4227.584 kb on - strand, within AO353_19285 at 4227.664 kb on + strand, within AO353_19285 at 4227.664 kb on + strand, within AO353_19285 at 4227.664 kb on + strand, within AO353_19285 at 4227.664 kb on + strand, within AO353_19285 at 4227.664 kb on + strand, within AO353_19285 at 4227.664 kb on + strand, within AO353_19285 at 4227.664 kb on + strand, within AO353_19285 at 4227.664 kb on + strand, within AO353_19285 at 4227.664 kb on + strand, within AO353_19285 at 4227.664 kb on + strand, within AO353_19285 at 4227.664 kb on + strand, within AO353_19285 at 4227.664 kb on + strand, within AO353_19285 at 4227.665 kb on - strand, within AO353_19285 at 4227.665 kb on - strand, within AO353_19285 at 4227.665 kb on - strand, within AO353_19285 at 4227.665 kb on - strand, within AO353_19285 at 4227.665 kb on - strand, within AO353_19285 at 4227.976 kb on + strand, within AO353_19285 at 4227.976 kb on + strand, within AO353_19285 at 4227.976 kb on + strand, within AO353_19285 at 4227.977 kb on - strand, within AO353_19285 at 4227.977 kb on - strand, within AO353_19285 at 4227.990 kb on + strand, within AO353_19285 at 4227.990 kb on + strand, within AO353_19285 at 4227.990 kb on + strand, within AO353_19285 at 4227.990 kb on + strand, within AO353_19285 at 4227.990 kb on + strand, within AO353_19285 at 4227.991 kb on - strand, within AO353_19285 at 4227.991 kb on - strand at 4227.991 kb on - strand, within AO353_19285 at 4228.150 kb on - strand at 4228.150 kb on - strand at 4228.191 kb on + strand at 4228.191 kb on + strand at 4228.191 kb on + strand at 4228.191 kb on + strand at 4228.191 kb on + strand at 4228.191 kb on + strand at 4228.191 kb on + strand at 4228.191 kb on + strand at 4228.191 kb on + strand at 4228.191 kb on + strand at 4228.191 kb on + strand at 4228.191 kb on + strand at 4228.192 kb on - strand at 4228.192 kb on - strand at 4228.192 kb on - strand at 4228.192 kb on - strand at 4228.192 kb on - strand at 4228.192 kb on - strand at 4228.192 kb on - strand at 4228.192 kb on - strand at 4228.192 kb on - strand at 4228.193 kb on + strand at 4228.194 kb on - strand at 4228.248 kb on + strand at 4228.415 kb on + strand, within AO353_19290 at 4228.415 kb on + strand, within AO353_19290 at 4228.415 kb on + strand, within AO353_19290 at 4228.416 kb on - strand, within AO353_19290 at 4228.518 kb on - strand at 4228.652 kb on + strand, within AO353_19290 at 4228.935 kb on + strand, within AO353_19290 at 4228.936 kb on - strand, within AO353_19290 at 4228.936 kb on - strand, within AO353_19290 at 4229.039 kb on + strand at 4229.039 kb on + strand at 4229.113 kb on + strand at 4229.125 kb on + strand at 4229.125 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.25 vol% remove 4,226,258 + AO353_19280 0.22 +0.1 4,226,258 + AO353_19280 0.22 +0.3 4,226,258 + AO353_19280 0.22 -0.7 4,226,258 + AO353_19280 0.22 +2.1 4,226,259 - AO353_19280 0.23 -2.0 4,226,608 + +0.6 4,226,680 + +0.8 4,226,680 + -0.2 4,226,680 + +0.0 4,226,681 - -0.6 4,226,681 - +0.1 4,226,685 + -0.2 4,226,685 + +1.3 4,226,685 + +0.5 4,226,685 + +0.0 4,226,685 + -0.0 4,226,686 - +1.4 4,226,686 - +1.3 4,226,711 + -1.7 4,226,834 + -0.2 4,226,834 + +0.8 4,226,834 + +0.4 4,226,834 + +1.4 4,226,834 + +0.3 4,226,834 + +0.3 4,226,834 + -0.7 4,226,834 + +0.6 4,226,835 - +0.8 4,226,835 - +1.0 4,226,878 + +0.5 4,226,878 + +1.4 4,226,878 + -0.7 4,226,878 + +1.6 4,226,935 + +1.7 4,226,942 + +0.6 4,226,959 - +0.1 4,226,959 - -0.4 4,227,055 + -0.5 4,227,067 + -2.6 4,227,212 + +0.1 4,227,212 + -0.1 4,227,212 + +0.8 4,227,212 + -2.0 4,227,212 + +0.8 4,227,212 + +0.9 4,227,212 + +0.3 4,227,212 + -1.5 4,227,213 - +0.8 4,227,213 - -0.4 4,227,213 - +0.3 4,227,213 - +0.2 4,227,213 - +0.5 4,227,213 - -0.2 4,227,213 - -0.2 4,227,213 - +0.7 4,227,213 - +1.0 4,227,284 + AO353_19285 0.10 -0.3 4,227,284 + AO353_19285 0.10 -0.4 4,227,285 - AO353_19285 0.10 +0.5 4,227,285 - AO353_19285 0.10 +0.3 4,227,285 - AO353_19285 0.10 +1.4 4,227,285 - AO353_19285 0.10 +0.1 4,227,285 - AO353_19285 0.10 -0.2 4,227,478 + AO353_19285 0.31 +0.8 4,227,478 + +1.8 4,227,479 - AO353_19285 0.31 -0.7 4,227,479 - AO353_19285 0.31 -1.0 4,227,479 - AO353_19285 0.31 +0.8 4,227,479 - AO353_19285 0.31 +1.3 4,227,546 + AO353_19285 0.38 +0.3 4,227,546 + AO353_19285 0.38 +0.6 4,227,547 - AO353_19285 0.38 -1.3 4,227,547 - AO353_19285 0.38 +0.8 4,227,547 - AO353_19285 0.38 +0.3 4,227,547 - AO353_19285 0.38 +0.3 4,227,583 + AO353_19285 0.42 +1.1 4,227,583 + AO353_19285 0.42 +2.1 4,227,583 + AO353_19285 0.42 +0.8 4,227,584 - AO353_19285 0.42 +0.0 4,227,584 - AO353_19285 0.42 +1.6 4,227,664 + AO353_19285 0.51 -0.5 4,227,664 + AO353_19285 0.51 +0.3 4,227,664 + AO353_19285 0.51 -0.5 4,227,664 + AO353_19285 0.51 +0.4 4,227,664 + AO353_19285 0.51 -0.2 4,227,664 + AO353_19285 0.51 +1.8 4,227,664 + AO353_19285 0.51 -1.2 4,227,664 + AO353_19285 0.51 -0.6 4,227,664 + AO353_19285 0.51 -0.4 4,227,664 + AO353_19285 0.51 -1.5 4,227,664 + AO353_19285 0.51 +1.8 4,227,664 + AO353_19285 0.51 +0.5 4,227,665 - AO353_19285 0.51 -0.9 4,227,665 - AO353_19285 0.51 -0.2 4,227,665 - AO353_19285 0.51 +0.3 4,227,665 - AO353_19285 0.51 +0.8 4,227,665 - AO353_19285 0.51 -0.7 4,227,976 + AO353_19285 0.84 +0.5 4,227,976 + AO353_19285 0.84 -1.0 4,227,976 + AO353_19285 0.84 +0.2 4,227,977 - AO353_19285 0.84 +0.0 4,227,977 - AO353_19285 0.84 +0.8 4,227,990 + AO353_19285 0.85 +0.6 4,227,990 + AO353_19285 0.85 +0.8 4,227,990 + AO353_19285 0.85 +0.2 4,227,990 + AO353_19285 0.85 +0.8 4,227,990 + AO353_19285 0.85 -0.5 4,227,991 - AO353_19285 0.86 +0.3 4,227,991 - +0.4 4,227,991 - AO353_19285 0.86 -0.7 4,228,150 - +0.4 4,228,150 - -0.4 4,228,191 + +0.0 4,228,191 + -0.3 4,228,191 + +0.6 4,228,191 + +0.8 4,228,191 + -1.0 4,228,191 + +0.6 4,228,191 + +0.5 4,228,191 + -0.7 4,228,191 + -1.0 4,228,191 + +0.6 4,228,191 + +0.4 4,228,191 + +0.3 4,228,192 - +0.8 4,228,192 - +0.3 4,228,192 - -1.0 4,228,192 - +0.5 4,228,192 - -0.2 4,228,192 - -0.5 4,228,192 - -0.2 4,228,192 - +0.6 4,228,192 - -0.2 4,228,193 + +1.8 4,228,194 - +1.4 4,228,248 + -0.9 4,228,415 + AO353_19290 0.23 -2.0 4,228,415 + AO353_19290 0.23 +0.1 4,228,415 + AO353_19290 0.23 +0.7 4,228,416 - AO353_19290 0.23 -0.7 4,228,518 - +0.8 4,228,652 + AO353_19290 0.53 -0.3 4,228,935 + AO353_19290 0.88 +1.4 4,228,936 - AO353_19290 0.88 -0.9 4,228,936 - AO353_19290 0.88 -1.5 4,229,039 + -1.0 4,229,039 + +0.8 4,229,113 + +3.6 4,229,125 + -0.3 4,229,125 + -0.6
Or see this region's nucleotide sequence