Experiment: Furfuryl Alcohol 0.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_19095 and AO353_19100 overlap by 11 nucleotides AO353_19100 and AO353_19105 are separated by 61 nucleotides AO353_19105 and AO353_19110 are separated by 64 nucleotides
AO353_19095: AO353_19095 - hypothetical protein, at 4,188,962 to 4,189,711
_19095
AO353_19100: AO353_19100 - LysR family transcriptional regulator, at 4,189,701 to 4,190,591
_19100
AO353_19105: AO353_19105 - hypothetical protein, at 4,190,653 to 4,190,868
_19105
AO353_19110: AO353_19110 - cytoplasmic protein, at 4,190,933 to 4,192,162
_19110
Position (kb)
4190
4191 Strain fitness (log2 ratio)
-1
0
1
2
3 at 4189.702 kb on + strand at 4189.924 kb on + strand, within AO353_19100 at 4189.924 kb on + strand, within AO353_19100 at 4189.956 kb on + strand, within AO353_19100 at 4190.145 kb on + strand, within AO353_19100 at 4190.145 kb on + strand, within AO353_19100 at 4190.145 kb on + strand, within AO353_19100 at 4190.145 kb on + strand, within AO353_19100 at 4190.145 kb on + strand, within AO353_19100 at 4190.145 kb on + strand, within AO353_19100 at 4190.145 kb on + strand, within AO353_19100 at 4190.145 kb on + strand, within AO353_19100 at 4190.145 kb on + strand, within AO353_19100 at 4190.146 kb on - strand, within AO353_19100 at 4190.146 kb on - strand, within AO353_19100 at 4190.146 kb on - strand, within AO353_19100 at 4190.146 kb on - strand, within AO353_19100 at 4190.146 kb on - strand, within AO353_19100 at 4190.146 kb on - strand, within AO353_19100 at 4190.146 kb on - strand, within AO353_19100 at 4190.191 kb on + strand, within AO353_19100 at 4190.239 kb on + strand, within AO353_19100 at 4190.239 kb on + strand, within AO353_19100 at 4190.239 kb on + strand, within AO353_19100 at 4190.239 kb on + strand, within AO353_19100 at 4190.239 kb on + strand, within AO353_19100 at 4190.239 kb on + strand, within AO353_19100 at 4190.240 kb on - strand, within AO353_19100 at 4190.240 kb on - strand, within AO353_19100 at 4190.240 kb on - strand, within AO353_19100 at 4190.240 kb on - strand, within AO353_19100 at 4190.240 kb on - strand, within AO353_19100 at 4190.240 kb on - strand, within AO353_19100 at 4190.240 kb on - strand, within AO353_19100 at 4190.240 kb on - strand, within AO353_19100 at 4190.240 kb on - strand, within AO353_19100 at 4190.240 kb on - strand, within AO353_19100 at 4190.240 kb on - strand, within AO353_19100 at 4190.240 kb on - strand, within AO353_19100 at 4190.240 kb on - strand, within AO353_19100 at 4190.545 kb on + strand at 4190.575 kb on + strand at 4190.575 kb on + strand at 4190.576 kb on - strand at 4190.576 kb on - strand at 4190.583 kb on - strand at 4190.608 kb on - strand at 4190.634 kb on + strand at 4190.634 kb on + strand at 4190.634 kb on + strand at 4190.634 kb on + strand at 4190.634 kb on + strand at 4190.634 kb on + strand at 4190.635 kb on - strand at 4190.671 kb on + strand at 4190.671 kb on + strand at 4190.671 kb on + strand at 4190.672 kb on - strand at 4190.672 kb on - strand at 4190.881 kb on + strand at 4190.905 kb on + strand at 4190.906 kb on - strand at 4190.906 kb on - strand at 4191.107 kb on + strand, within AO353_19110 at 4191.107 kb on + strand, within AO353_19110 at 4191.107 kb on + strand, within AO353_19110 at 4191.108 kb on - strand, within AO353_19110 at 4191.108 kb on - strand, within AO353_19110 at 4191.137 kb on + strand, within AO353_19110 at 4191.137 kb on + strand, within AO353_19110 at 4191.137 kb on + strand, within AO353_19110 at 4191.138 kb on - strand, within AO353_19110 at 4191.138 kb on - strand, within AO353_19110 at 4191.187 kb on + strand, within AO353_19110 at 4191.187 kb on + strand, within AO353_19110 at 4191.187 kb on + strand, within AO353_19110 at 4191.187 kb on + strand, within AO353_19110 at 4191.188 kb on - strand, within AO353_19110 at 4191.188 kb on - strand at 4191.188 kb on - strand at 4191.188 kb on - strand, within AO353_19110 at 4191.188 kb on - strand, within AO353_19110 at 4191.188 kb on - strand, within AO353_19110 at 4191.188 kb on - strand, within AO353_19110 at 4191.201 kb on - strand, within AO353_19110 at 4191.240 kb on - strand, within AO353_19110 at 4191.240 kb on - strand, within AO353_19110 at 4191.240 kb on - strand, within AO353_19110 at 4191.240 kb on - strand, within AO353_19110 at 4191.290 kb on + strand, within AO353_19110 at 4191.290 kb on + strand, within AO353_19110 at 4191.290 kb on + strand, within AO353_19110 at 4191.290 kb on + strand, within AO353_19110 at 4191.290 kb on + strand, within AO353_19110 at 4191.290 kb on + strand, within AO353_19110 at 4191.291 kb on - strand, within AO353_19110 at 4191.291 kb on - strand, within AO353_19110 at 4191.291 kb on - strand, within AO353_19110 at 4191.291 kb on - strand, within AO353_19110 at 4191.291 kb on - strand, within AO353_19110 at 4191.291 kb on - strand, within AO353_19110 at 4191.291 kb on - strand, within AO353_19110 at 4191.509 kb on + strand, within AO353_19110 at 4191.509 kb on + strand, within AO353_19110 at 4191.509 kb on + strand, within AO353_19110 at 4191.509 kb on + strand, within AO353_19110 at 4191.645 kb on - strand, within AO353_19110 at 4191.747 kb on - strand, within AO353_19110 at 4191.775 kb on + strand, within AO353_19110
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.25 vol% remove 4,189,702 + -1.3 4,189,924 + AO353_19100 0.25 -1.1 4,189,924 + AO353_19100 0.25 -0.1 4,189,956 + AO353_19100 0.29 -1.5 4,190,145 + AO353_19100 0.50 +2.4 4,190,145 + AO353_19100 0.50 -1.3 4,190,145 + AO353_19100 0.50 -1.5 4,190,145 + AO353_19100 0.50 -0.6 4,190,145 + AO353_19100 0.50 +0.9 4,190,145 + AO353_19100 0.50 +0.3 4,190,145 + AO353_19100 0.50 +0.9 4,190,145 + AO353_19100 0.50 -1.5 4,190,145 + AO353_19100 0.50 +0.6 4,190,146 - AO353_19100 0.50 -1.7 4,190,146 - AO353_19100 0.50 -0.3 4,190,146 - AO353_19100 0.50 +0.9 4,190,146 - AO353_19100 0.50 -1.1 4,190,146 - AO353_19100 0.50 -0.6 4,190,146 - AO353_19100 0.50 +0.0 4,190,146 - AO353_19100 0.50 -0.1 4,190,191 + AO353_19100 0.55 -1.1 4,190,239 + AO353_19100 0.60 +1.3 4,190,239 + AO353_19100 0.60 +0.6 4,190,239 + AO353_19100 0.60 -0.1 4,190,239 + AO353_19100 0.60 -0.5 4,190,239 + AO353_19100 0.60 -0.4 4,190,239 + AO353_19100 0.60 -0.1 4,190,240 - AO353_19100 0.60 -0.7 4,190,240 - AO353_19100 0.60 -0.6 4,190,240 - AO353_19100 0.60 +0.9 4,190,240 - AO353_19100 0.60 -0.7 4,190,240 - AO353_19100 0.60 -0.5 4,190,240 - AO353_19100 0.60 -1.1 4,190,240 - AO353_19100 0.60 +0.2 4,190,240 - AO353_19100 0.60 -0.6 4,190,240 - AO353_19100 0.60 +0.3 4,190,240 - AO353_19100 0.60 -1.7 4,190,240 - AO353_19100 0.60 +0.9 4,190,240 - AO353_19100 0.60 -0.6 4,190,240 - AO353_19100 0.60 -1.0 4,190,545 + +0.1 4,190,575 + +0.0 4,190,575 + +0.3 4,190,576 - -1.7 4,190,576 - +0.5 4,190,583 - +1.1 4,190,608 - +0.4 4,190,634 + +0.0 4,190,634 + +0.4 4,190,634 + -0.3 4,190,634 + -0.1 4,190,634 + +0.3 4,190,634 + +0.9 4,190,635 - +0.5 4,190,671 + +0.5 4,190,671 + +0.5 4,190,671 + -1.1 4,190,672 - -1.1 4,190,672 - -0.3 4,190,881 + +0.2 4,190,905 + -1.4 4,190,906 - +0.9 4,190,906 - +0.3 4,191,107 + AO353_19110 0.14 +2.9 4,191,107 + AO353_19110 0.14 +0.9 4,191,107 + AO353_19110 0.14 +0.2 4,191,108 - AO353_19110 0.14 +0.3 4,191,108 - AO353_19110 0.14 -0.3 4,191,137 + AO353_19110 0.17 +0.5 4,191,137 + AO353_19110 0.17 -0.9 4,191,137 + AO353_19110 0.17 +1.4 4,191,138 - AO353_19110 0.17 +0.1 4,191,138 - AO353_19110 0.17 -0.5 4,191,187 + AO353_19110 0.21 +1.0 4,191,187 + AO353_19110 0.21 +0.4 4,191,187 + AO353_19110 0.21 +1.5 4,191,187 + AO353_19110 0.21 -1.4 4,191,188 - AO353_19110 0.21 +0.5 4,191,188 - +0.3 4,191,188 - +1.9 4,191,188 - AO353_19110 0.21 -0.4 4,191,188 - AO353_19110 0.21 +2.2 4,191,188 - AO353_19110 0.21 +0.7 4,191,188 - AO353_19110 0.21 -0.1 4,191,201 - AO353_19110 0.22 +0.9 4,191,240 - AO353_19110 0.25 +0.1 4,191,240 - AO353_19110 0.25 -0.3 4,191,240 - AO353_19110 0.25 +1.1 4,191,240 - AO353_19110 0.25 +1.6 4,191,290 + AO353_19110 0.29 +1.9 4,191,290 + AO353_19110 0.29 -0.6 4,191,290 + AO353_19110 0.29 +1.2 4,191,290 + AO353_19110 0.29 +0.3 4,191,290 + AO353_19110 0.29 -0.1 4,191,290 + AO353_19110 0.29 +0.3 4,191,291 - AO353_19110 0.29 +0.2 4,191,291 - AO353_19110 0.29 +0.3 4,191,291 - AO353_19110 0.29 +0.3 4,191,291 - AO353_19110 0.29 +1.9 4,191,291 - AO353_19110 0.29 +0.7 4,191,291 - AO353_19110 0.29 +1.9 4,191,291 - AO353_19110 0.29 -1.1 4,191,509 + AO353_19110 0.47 +0.9 4,191,509 + AO353_19110 0.47 +0.1 4,191,509 + AO353_19110 0.47 +0.1 4,191,509 + AO353_19110 0.47 +0.9 4,191,645 - AO353_19110 0.58 +0.6 4,191,747 - AO353_19110 0.66 +0.4 4,191,775 + AO353_19110 0.68 -0.4
Or see this region's nucleotide sequence