Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17325

Experiment: Furfuryl Alcohol 0.25 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_17320 and AO353_17325 are separated by 22 nucleotidesAO353_17325 and AO353_17330 are separated by 25 nucleotidesAO353_17330 and AO353_17335 are separated by 154 nucleotides AO353_17320: AO353_17320 - NADH:flavin oxidoreductase, at 3,828,847 to 3,829,896 _17320 AO353_17325: AO353_17325 - arabinose transporter permease, at 3,829,919 to 3,831,085 _17325 AO353_17330: AO353_17330 - ArsR family transcriptional regulator, at 3,831,111 to 3,831,416 _17330 AO353_17335: AO353_17335 - ACP phosphodiesterase, at 3,831,571 to 3,832,164 _17335 Position (kb) 3829 3830 3831 3832Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 3829.052 kb on + strand, within AO353_17320at 3829.052 kb on + strand, within AO353_17320at 3829.052 kb on + strand, within AO353_17320at 3829.052 kb on + strand, within AO353_17320at 3829.052 kb on + strand, within AO353_17320at 3829.052 kb on + strand, within AO353_17320at 3829.052 kb on + strand, within AO353_17320at 3829.052 kb on + strand, within AO353_17320at 3829.052 kb on + strand, within AO353_17320at 3829.052 kb on + strand, within AO353_17320at 3829.052 kb on + strand, within AO353_17320at 3829.052 kb on + strand, within AO353_17320at 3829.052 kb on + strand, within AO353_17320at 3829.052 kb on + strand, within AO353_17320at 3829.052 kb on + strand, within AO353_17320at 3829.052 kb on + strand, within AO353_17320at 3829.052 kb on + strand, within AO353_17320at 3829.052 kb on + strand, within AO353_17320at 3829.052 kb on + strand, within AO353_17320at 3829.052 kb on + strand, within AO353_17320at 3829.052 kb on + strand, within AO353_17320at 3829.052 kb on + strand, within AO353_17320at 3829.052 kb on + strand, within AO353_17320at 3829.053 kb on - strand, within AO353_17320at 3829.053 kb on - strand, within AO353_17320at 3829.053 kb on - strand, within AO353_17320at 3829.053 kb on - strand, within AO353_17320at 3829.053 kb on - strand, within AO353_17320at 3829.053 kb on - strand, within AO353_17320at 3829.053 kb on - strand, within AO353_17320at 3829.053 kb on - strand, within AO353_17320at 3829.053 kb on - strand, within AO353_17320at 3829.053 kb on - strand, within AO353_17320at 3829.053 kb on - strand, within AO353_17320at 3829.141 kb on - strand, within AO353_17320at 3829.160 kb on + strand, within AO353_17320at 3829.160 kb on + strand, within AO353_17320at 3829.160 kb on + strand, within AO353_17320at 3829.160 kb on + strand, within AO353_17320at 3829.160 kb on + strand, within AO353_17320at 3829.160 kb on + strand, within AO353_17320at 3829.160 kb on + strand, within AO353_17320at 3829.160 kb on + strand, within AO353_17320at 3829.161 kb on - strand, within AO353_17320at 3829.161 kb on - strand, within AO353_17320at 3829.313 kb on + strand, within AO353_17320at 3829.313 kb on + strand, within AO353_17320at 3829.313 kb on + strand, within AO353_17320at 3829.314 kb on - strand, within AO353_17320at 3829.568 kb on + strand, within AO353_17320at 3829.569 kb on - strand, within AO353_17320at 3829.769 kb on + strand, within AO353_17320at 3829.769 kb on + strand, within AO353_17320at 3829.769 kb on + strand, within AO353_17320at 3829.769 kb on + strand, within AO353_17320at 3829.769 kb on + strand, within AO353_17320at 3829.769 kb on + strand, within AO353_17320at 3829.769 kb on + strand, within AO353_17320at 3829.769 kb on + strand, within AO353_17320at 3829.769 kb on + strand, within AO353_17320at 3829.769 kb on + strand, within AO353_17320at 3829.769 kb on + strand, within AO353_17320at 3829.769 kb on + strand, within AO353_17320at 3829.769 kb on + strand, within AO353_17320at 3829.770 kb on - strand, within AO353_17320at 3829.770 kb on - strand, within AO353_17320at 3829.770 kb on - strand, within AO353_17320at 3829.770 kb on - strand, within AO353_17320at 3829.770 kb on - strand, within AO353_17320at 3829.770 kb on - strand, within AO353_17320at 3829.770 kb on - strand, within AO353_17320at 3829.770 kb on - strand, within AO353_17320at 3829.770 kb on - strand, within AO353_17320at 3829.770 kb on - strand, within AO353_17320at 3829.770 kb on - strand, within AO353_17320at 3829.770 kb on - strand, within AO353_17320at 3829.770 kb on - strand, within AO353_17320at 3829.772 kb on + strand, within AO353_17320at 3829.772 kb on + strand, within AO353_17320at 3829.772 kb on + strand, within AO353_17320at 3829.772 kb on + strand, within AO353_17320at 3829.772 kb on + strand, within AO353_17320at 3829.772 kb on + strand, within AO353_17320at 3829.773 kb on - strand, within AO353_17320at 3829.773 kb on - strand, within AO353_17320at 3829.773 kb on - strand, within AO353_17320at 3829.773 kb on - strand, within AO353_17320at 3829.773 kb on - strand, within AO353_17320at 3829.773 kb on - strand, within AO353_17320at 3829.773 kb on - strand, within AO353_17320at 3829.773 kb on - strand, within AO353_17320at 3829.773 kb on - strand, within AO353_17320at 3829.773 kb on - strand, within AO353_17320at 3829.773 kb on - strand, within AO353_17320at 3829.888 kb on - strandat 3829.898 kb on + strandat 3829.898 kb on + strandat 3829.898 kb on + strandat 3829.898 kb on + strandat 3829.898 kb on + strandat 3829.898 kb on + strandat 3829.899 kb on - strandat 3829.899 kb on - strandat 3829.899 kb on - strandat 3829.899 kb on - strandat 3829.899 kb on - strandat 3829.899 kb on - strandat 3829.901 kb on + strandat 3829.901 kb on + strandat 3829.901 kb on + strandat 3829.901 kb on + strandat 3829.901 kb on + strandat 3829.902 kb on - strandat 3829.902 kb on - strandat 3829.902 kb on - strandat 3829.902 kb on - strandat 3829.902 kb on - strandat 3829.917 kb on + strandat 3829.917 kb on + strandat 3829.917 kb on + strandat 3829.918 kb on - strandat 3829.918 kb on - strandat 3829.918 kb on - strandat 3829.949 kb on - strandat 3829.966 kb on + strandat 3829.967 kb on - strandat 3829.967 kb on - strandat 3830.147 kb on + strand, within AO353_17325at 3830.147 kb on + strand, within AO353_17325at 3830.147 kb on + strand, within AO353_17325at 3830.148 kb on - strand, within AO353_17325at 3830.148 kb on - strand, within AO353_17325at 3830.148 kb on - strand, within AO353_17325at 3830.148 kb on - strand, within AO353_17325at 3830.399 kb on - strand, within AO353_17325at 3830.424 kb on + strand, within AO353_17325at 3830.424 kb on + strand, within AO353_17325at 3830.424 kb on + strand, within AO353_17325at 3830.424 kb on + strand, within AO353_17325at 3830.424 kb on + strand, within AO353_17325at 3830.424 kb on + strand, within AO353_17325at 3830.424 kb on + strand, within AO353_17325at 3830.425 kb on - strand, within AO353_17325at 3830.425 kb on - strand, within AO353_17325at 3830.425 kb on - strand, within AO353_17325at 3830.425 kb on - strand, within AO353_17325at 3830.425 kb on - strand, within AO353_17325at 3830.425 kb on - strand, within AO353_17325at 3830.425 kb on - strand, within AO353_17325at 3830.428 kb on + strand, within AO353_17325at 3830.428 kb on + strand, within AO353_17325at 3830.428 kb on + strand, within AO353_17325at 3830.428 kb on + strand, within AO353_17325at 3830.428 kb on + strand, within AO353_17325at 3830.428 kb on + strand, within AO353_17325at 3830.428 kb on + strand, within AO353_17325at 3830.428 kb on + strand, within AO353_17325at 3830.428 kb on + strand, within AO353_17325at 3830.428 kb on + strand, within AO353_17325at 3830.428 kb on + strand, within AO353_17325at 3830.428 kb on + strand, within AO353_17325at 3830.429 kb on - strand, within AO353_17325at 3830.429 kb on - strand, within AO353_17325at 3830.429 kb on - strand, within AO353_17325at 3830.429 kb on - strand, within AO353_17325at 3830.429 kb on - strand, within AO353_17325at 3830.429 kb on - strand, within AO353_17325at 3830.429 kb on - strand, within AO353_17325at 3830.429 kb on - strand, within AO353_17325at 3830.486 kb on - strand, within AO353_17325at 3830.654 kb on + strand, within AO353_17325at 3830.814 kb on + strand, within AO353_17325at 3830.815 kb on - strand, within AO353_17325at 3831.191 kb on + strand, within AO353_17330at 3831.387 kb on + strandat 3831.387 kb on + strandat 3831.387 kb on + strandat 3831.387 kb on + strandat 3831.387 kb on + strandat 3831.388 kb on - strandat 3831.390 kb on + strandat 3831.390 kb on + strandat 3831.390 kb on + strandat 3831.390 kb on + strandat 3831.391 kb on - strandat 3831.391 kb on - strandat 3831.391 kb on - strandat 3831.391 kb on - strandat 3831.435 kb on + strandat 3831.436 kb on - strandat 3831.515 kb on + strandat 3831.558 kb on + strandat 3831.558 kb on + strandat 3831.558 kb on + strandat 3831.559 kb on - strandat 3831.559 kb on - strandat 3831.559 kb on - strandat 3831.563 kb on + strandat 3831.564 kb on - strandat 3831.564 kb on - strandat 3831.564 kb on - strandat 3831.564 kb on - strandat 3831.564 kb on - strandat 3831.577 kb on + strandat 3831.577 kb on + strandat 3831.577 kb on + strandat 3831.577 kb on + strandat 3831.577 kb on + strandat 3831.577 kb on + strandat 3831.578 kb on - strandat 3831.578 kb on - strandat 3831.578 kb on - strandat 3831.578 kb on - strandat 3831.578 kb on - strandat 3831.578 kb on - strandat 3831.634 kb on + strand, within AO353_17335at 3831.635 kb on - strand, within AO353_17335at 3831.635 kb on - strand, within AO353_17335at 3831.766 kb on - strand, within AO353_17335at 3831.766 kb on - strand, within AO353_17335at 3831.844 kb on + strand, within AO353_17335at 3831.883 kb on + strand, within AO353_17335at 3831.884 kb on - strand, within AO353_17335at 3831.970 kb on + strand, within AO353_17335at 3832.072 kb on + strand, within AO353_17335at 3832.072 kb on + strand, within AO353_17335at 3832.072 kb on + strand, within AO353_17335at 3832.072 kb on + strand, within AO353_17335at 3832.072 kb on + strand, within AO353_17335at 3832.073 kb on - strand, within AO353_17335at 3832.073 kb on - strand, within AO353_17335at 3832.073 kb on - strand, within AO353_17335at 3832.073 kb on - strand, within AO353_17335at 3832.073 kb on - strand, within AO353_17335at 3832.073 kb on - strand, within AO353_17335at 3832.073 kb on - strand, within AO353_17335at 3832.073 kb on - strand, within AO353_17335at 3832.073 kb on - strand, within AO353_17335

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Per-strain Table

Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.25 vol%
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3,829,052 + AO353_17320 0.20 -0.6
3,829,052 + AO353_17320 0.20 -2.0
3,829,052 + AO353_17320 0.20 -2.3
3,829,052 + AO353_17320 0.20 -1.8
3,829,052 + AO353_17320 0.20 -1.8
3,829,052 + AO353_17320 0.20 -1.2
3,829,052 + AO353_17320 0.20 -3.0
3,829,052 + AO353_17320 0.20 -1.7
3,829,052 + AO353_17320 0.20 -0.2
3,829,052 + AO353_17320 0.20 +0.0
3,829,052 + AO353_17320 0.20 -4.2
3,829,052 + AO353_17320 0.20 -2.4
3,829,052 + AO353_17320 0.20 -3.1
3,829,052 + AO353_17320 0.20 -1.6
3,829,052 + AO353_17320 0.20 -0.6
3,829,052 + AO353_17320 0.20 -3.2
3,829,052 + AO353_17320 0.20 -2.6
3,829,052 + AO353_17320 0.20 -1.3
3,829,052 + AO353_17320 0.20 -1.6
3,829,052 + AO353_17320 0.20 -1.7
3,829,052 + AO353_17320 0.20 -0.7
3,829,052 + AO353_17320 0.20 -3.8
3,829,052 + AO353_17320 0.20 -2.4
3,829,053 - AO353_17320 0.20 -2.4
3,829,053 - AO353_17320 0.20 -3.2
3,829,053 - AO353_17320 0.20 -1.8
3,829,053 - AO353_17320 0.20 -1.8
3,829,053 - AO353_17320 0.20 +0.0
3,829,053 - AO353_17320 0.20 -1.0
3,829,053 - AO353_17320 0.20 -0.6
3,829,053 - AO353_17320 0.20 -2.4
3,829,053 - AO353_17320 0.20 -0.6
3,829,053 - AO353_17320 0.20 -1.0
3,829,053 - AO353_17320 0.20 -4.1
3,829,141 - AO353_17320 0.28 -0.2
3,829,160 + AO353_17320 0.30 -1.3
3,829,160 + AO353_17320 0.30 -2.2
3,829,160 + AO353_17320 0.30 -1.9
3,829,160 + AO353_17320 0.30 -2.1
3,829,160 + AO353_17320 0.30 -1.0
3,829,160 + AO353_17320 0.30 -3.6
3,829,160 + AO353_17320 0.30 -1.3
3,829,160 + AO353_17320 0.30 -0.8
3,829,161 - AO353_17320 0.30 -3.0
3,829,161 - AO353_17320 0.30 -1.6
3,829,313 + AO353_17320 0.44 -1.5
3,829,313 + AO353_17320 0.44 -1.6
3,829,313 + AO353_17320 0.44 -0.6
3,829,314 - AO353_17320 0.44 -0.6
3,829,568 + AO353_17320 0.69 -1.8
3,829,569 - AO353_17320 0.69 -1.0
3,829,769 + AO353_17320 0.88 -0.6
3,829,769 + AO353_17320 0.88 -1.0
3,829,769 + AO353_17320 0.88 -0.3
3,829,769 + AO353_17320 0.88 -0.6
3,829,769 + AO353_17320 0.88 -1.8
3,829,769 + AO353_17320 0.88 -2.7
3,829,769 + AO353_17320 0.88 -2.3
3,829,769 + AO353_17320 0.88 -1.0
3,829,769 + AO353_17320 0.88 -2.0
3,829,769 + AO353_17320 0.88 -2.6
3,829,769 + AO353_17320 0.88 -1.6
3,829,769 + AO353_17320 0.88 -1.0
3,829,769 + AO353_17320 0.88 -2.6
3,829,770 - AO353_17320 0.88 -2.2
3,829,770 - AO353_17320 0.88 +0.0
3,829,770 - AO353_17320 0.88 -2.9
3,829,770 - AO353_17320 0.88 -1.6
3,829,770 - AO353_17320 0.88 -2.4
3,829,770 - AO353_17320 0.88 -1.4
3,829,770 - AO353_17320 0.88 -2.8
3,829,770 - AO353_17320 0.88 -1.3
3,829,770 - AO353_17320 0.88 -2.2
3,829,770 - AO353_17320 0.88 -1.8
3,829,770 - AO353_17320 0.88 -1.0
3,829,770 - AO353_17320 0.88 -2.4
3,829,770 - AO353_17320 0.88 -2.3
3,829,772 + AO353_17320 0.88 -1.0
3,829,772 + AO353_17320 0.88 -2.4
3,829,772 + AO353_17320 0.88 +0.3
3,829,772 + AO353_17320 0.88 -4.4
3,829,772 + AO353_17320 0.88 -2.8
3,829,772 + AO353_17320 0.88 -2.4
3,829,773 - AO353_17320 0.88 -1.3
3,829,773 - AO353_17320 0.88 -3.7
3,829,773 - AO353_17320 0.88 -1.3
3,829,773 - AO353_17320 0.88 -1.6
3,829,773 - AO353_17320 0.88 -2.9
3,829,773 - AO353_17320 0.88 +0.0
3,829,773 - AO353_17320 0.88 -2.3
3,829,773 - AO353_17320 0.88 -1.6
3,829,773 - AO353_17320 0.88 -2.7
3,829,773 - AO353_17320 0.88 -3.2
3,829,773 - AO353_17320 0.88 +0.0
3,829,888 - -2.6
3,829,898 + -1.3
3,829,898 + -1.0
3,829,898 + -2.4
3,829,898 + +0.0
3,829,898 + -1.6
3,829,898 + -2.0
3,829,899 - -1.6
3,829,899 - -2.8
3,829,899 - -0.6
3,829,899 - -2.9
3,829,899 - -1.6
3,829,899 - +0.0
3,829,901 + -0.6
3,829,901 + +0.6
3,829,901 + +0.0
3,829,901 + -2.3
3,829,901 + -1.2
3,829,902 - -1.6
3,829,902 - -0.3
3,829,902 - +0.4
3,829,902 - -2.6
3,829,902 - -0.4
3,829,917 + -2.2
3,829,917 + -1.0
3,829,917 + -1.6
3,829,918 - +1.9
3,829,918 - +0.5
3,829,918 - -0.6
3,829,949 - +1.3
3,829,966 + -2.9
3,829,967 - +3.9
3,829,967 - +2.9
3,830,147 + AO353_17325 0.20 -2.3
3,830,147 + AO353_17325 0.20 -0.8
3,830,147 + AO353_17325 0.20 -2.2
3,830,148 - AO353_17325 0.20 +1.4
3,830,148 - AO353_17325 0.20 +2.7
3,830,148 - AO353_17325 0.20 +2.1
3,830,148 - AO353_17325 0.20 +2.6
3,830,399 - AO353_17325 0.41 +2.7
3,830,424 + AO353_17325 0.43 -2.0
3,830,424 + AO353_17325 0.43 -2.3
3,830,424 + AO353_17325 0.43 +0.0
3,830,424 + AO353_17325 0.43 -1.0
3,830,424 + AO353_17325 0.43 -0.7
3,830,424 + AO353_17325 0.43 +0.8
3,830,424 + AO353_17325 0.43 -1.0
3,830,425 - AO353_17325 0.43 +1.7
3,830,425 - AO353_17325 0.43 +3.9
3,830,425 - AO353_17325 0.43 +3.1
3,830,425 - AO353_17325 0.43 +1.6
3,830,425 - AO353_17325 0.43 +3.7
3,830,425 - AO353_17325 0.43 +2.2
3,830,425 - AO353_17325 0.43 +1.1
3,830,428 + AO353_17325 0.44 -1.3
3,830,428 + AO353_17325 0.44 -1.3
3,830,428 + AO353_17325 0.44 -0.7
3,830,428 + AO353_17325 0.44 +1.0
3,830,428 + AO353_17325 0.44 -3.5
3,830,428 + AO353_17325 0.44 -0.4
3,830,428 + AO353_17325 0.44 -2.5
3,830,428 + AO353_17325 0.44 -0.2
3,830,428 + AO353_17325 0.44 -1.5
3,830,428 + AO353_17325 0.44 -2.6
3,830,428 + AO353_17325 0.44 -2.6
3,830,428 + AO353_17325 0.44 -2.5
3,830,429 - AO353_17325 0.44 +2.0
3,830,429 - AO353_17325 0.44 +2.9
3,830,429 - AO353_17325 0.44 +0.0
3,830,429 - AO353_17325 0.44 +2.9
3,830,429 - AO353_17325 0.44 +2.1
3,830,429 - AO353_17325 0.44 +2.2
3,830,429 - AO353_17325 0.44 +2.0
3,830,429 - AO353_17325 0.44 +2.0
3,830,486 - AO353_17325 0.49 +2.3
3,830,654 + AO353_17325 0.63 -1.9
3,830,814 + AO353_17325 0.77 -2.2
3,830,815 - AO353_17325 0.77 +1.7
3,831,191 + AO353_17330 0.26 -2.6
3,831,387 + -1.3
3,831,387 + -1.8
3,831,387 + -1.9
3,831,387 + -0.6
3,831,387 + +0.4
3,831,388 - +1.7
3,831,390 + -2.0
3,831,390 + -2.7
3,831,390 + -0.6
3,831,390 + -1.3
3,831,391 - +2.2
3,831,391 - +2.3
3,831,391 - +3.3
3,831,391 - +2.3
3,831,435 + -0.6
3,831,436 - +1.4
3,831,515 + -0.6
3,831,558 + +1.0
3,831,558 + -1.5
3,831,558 + +0.4
3,831,559 - +2.2
3,831,559 - +1.4
3,831,559 - +3.4
3,831,563 + +0.7
3,831,564 - +2.1
3,831,564 - +2.7
3,831,564 - +2.6
3,831,564 - +1.9
3,831,564 - +2.2
3,831,577 + -0.6
3,831,577 + +0.8
3,831,577 + +0.5
3,831,577 + -1.0
3,831,577 + -0.9
3,831,577 + +0.2
3,831,578 - +3.1
3,831,578 - +2.8
3,831,578 - +2.0
3,831,578 - +3.4
3,831,578 - +2.3
3,831,578 - +1.0
3,831,634 + AO353_17335 0.11 -1.0
3,831,635 - AO353_17335 0.11 +2.7
3,831,635 - AO353_17335 0.11 +2.6
3,831,766 - AO353_17335 0.33 +3.4
3,831,766 - AO353_17335 0.33 +1.7
3,831,844 + AO353_17335 0.46 +0.1
3,831,883 + AO353_17335 0.53 -0.1
3,831,884 - AO353_17335 0.53 +2.0
3,831,970 + AO353_17335 0.67 +2.6
3,832,072 + AO353_17335 0.84 +0.4
3,832,072 + AO353_17335 0.84 -0.7
3,832,072 + AO353_17335 0.84 +0.5
3,832,072 + AO353_17335 0.84 +0.1
3,832,072 + AO353_17335 0.84 -0.0
3,832,073 - AO353_17335 0.85 -0.7
3,832,073 - AO353_17335 0.85 +0.8
3,832,073 - AO353_17335 0.85 +0.8
3,832,073 - AO353_17335 0.85 +0.7
3,832,073 - AO353_17335 0.85 -0.1
3,832,073 - AO353_17335 0.85 -0.9
3,832,073 - AO353_17335 0.85 +1.3
3,832,073 - AO353_17335 0.85 +1.1
3,832,073 - AO353_17335 0.85 +0.0

Or see this region's nucleotide sequence