Experiment: Furfuryl Alcohol 0.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_13625 and AO353_13630 are separated by 64 nucleotides AO353_13630 and AO353_13635 are separated by 89 nucleotides AO353_13635 and AO353_13640 are separated by 64 nucleotides
AO353_13625: AO353_13625 - hypothetical protein, at 3,024,919 to 3,025,725
_13625
AO353_13630: AO353_13630 - hypothetical protein, at 3,025,790 to 3,026,440
_13630
AO353_13635: AO353_13635 - hypothetical protein, at 3,026,530 to 3,027,126
_13635
AO353_13640: AO353_13640 - histidine kinase, at 3,027,191 to 3,029,968
_13640
Position (kb)
3026
3027
3028 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3025.638 kb on + strand, within AO353_13625 at 3025.674 kb on + strand at 3025.724 kb on - strand at 3025.726 kb on + strand at 3025.761 kb on - strand at 3025.789 kb on + strand at 3025.790 kb on - strand at 3025.823 kb on - strand at 3025.874 kb on - strand, within AO353_13630 at 3025.874 kb on - strand, within AO353_13630 at 3025.916 kb on - strand, within AO353_13630 at 3025.955 kb on + strand, within AO353_13630 at 3025.955 kb on + strand, within AO353_13630 at 3026.000 kb on - strand, within AO353_13630 at 3026.000 kb on - strand, within AO353_13630 at 3026.091 kb on + strand, within AO353_13630 at 3026.091 kb on + strand, within AO353_13630 at 3026.091 kb on + strand, within AO353_13630 at 3026.092 kb on - strand, within AO353_13630 at 3026.092 kb on - strand, within AO353_13630 at 3026.114 kb on + strand, within AO353_13630 at 3026.114 kb on + strand, within AO353_13630 at 3026.185 kb on + strand, within AO353_13630 at 3026.243 kb on + strand, within AO353_13630 at 3026.255 kb on + strand at 3026.257 kb on + strand, within AO353_13630 at 3026.257 kb on + strand, within AO353_13630 at 3026.257 kb on + strand, within AO353_13630 at 3026.257 kb on + strand, within AO353_13630 at 3026.257 kb on + strand, within AO353_13630 at 3026.257 kb on + strand, within AO353_13630 at 3026.257 kb on + strand, within AO353_13630 at 3026.257 kb on + strand, within AO353_13630 at 3026.257 kb on + strand, within AO353_13630 at 3026.258 kb on - strand, within AO353_13630 at 3026.258 kb on - strand, within AO353_13630 at 3026.258 kb on - strand, within AO353_13630 at 3026.258 kb on - strand, within AO353_13630 at 3026.258 kb on - strand, within AO353_13630 at 3026.258 kb on - strand, within AO353_13630 at 3026.258 kb on - strand, within AO353_13630 at 3026.258 kb on - strand, within AO353_13630 at 3026.258 kb on - strand, within AO353_13630 at 3026.369 kb on + strand, within AO353_13630 at 3026.370 kb on - strand, within AO353_13630 at 3026.370 kb on - strand, within AO353_13630 at 3026.402 kb on + strand at 3026.480 kb on + strand at 3026.531 kb on + strand at 3026.531 kb on + strand at 3026.531 kb on + strand at 3026.531 kb on + strand at 3026.532 kb on - strand at 3026.532 kb on - strand at 3026.532 kb on - strand at 3026.532 kb on - strand at 3026.532 kb on - strand at 3026.544 kb on - strand at 3026.565 kb on + strand at 3026.565 kb on + strand at 3026.565 kb on + strand at 3026.663 kb on + strand, within AO353_13635 at 3026.663 kb on + strand, within AO353_13635 at 3026.663 kb on + strand, within AO353_13635 at 3026.663 kb on + strand, within AO353_13635 at 3026.663 kb on + strand, within AO353_13635 at 3026.663 kb on + strand, within AO353_13635 at 3026.663 kb on + strand, within AO353_13635 at 3026.664 kb on - strand, within AO353_13635 at 3026.664 kb on - strand, within AO353_13635 at 3026.664 kb on - strand, within AO353_13635 at 3026.664 kb on - strand, within AO353_13635 at 3026.917 kb on + strand, within AO353_13635 at 3026.960 kb on + strand, within AO353_13635 at 3026.960 kb on + strand, within AO353_13635 at 3026.960 kb on + strand, within AO353_13635 at 3026.961 kb on - strand, within AO353_13635 at 3026.961 kb on - strand, within AO353_13635 at 3026.961 kb on - strand, within AO353_13635 at 3026.961 kb on - strand, within AO353_13635 at 3026.961 kb on - strand, within AO353_13635 at 3026.961 kb on - strand, within AO353_13635 at 3026.961 kb on - strand, within AO353_13635 at 3026.961 kb on - strand, within AO353_13635 at 3027.080 kb on + strand at 3027.080 kb on + strand at 3027.102 kb on - strand at 3027.165 kb on + strand at 3027.165 kb on + strand at 3027.165 kb on + strand at 3027.289 kb on + strand at 3027.290 kb on - strand at 3027.356 kb on + strand at 3027.357 kb on - strand at 3027.357 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.25 vol% remove 3,025,638 + AO353_13625 0.89 -0.7 3,025,674 + -1.7 3,025,724 - -0.0 3,025,726 + +0.2 3,025,761 - +0.7 3,025,789 + -0.3 3,025,790 - +0.1 3,025,823 - +0.2 3,025,874 - AO353_13630 0.13 +0.1 3,025,874 - AO353_13630 0.13 -1.7 3,025,916 - AO353_13630 0.19 +1.2 3,025,955 + AO353_13630 0.25 -1.3 3,025,955 + AO353_13630 0.25 -1.3 3,026,000 - AO353_13630 0.32 -0.9 3,026,000 - AO353_13630 0.32 -0.7 3,026,091 + AO353_13630 0.46 -0.6 3,026,091 + AO353_13630 0.46 -0.0 3,026,091 + AO353_13630 0.46 -1.9 3,026,092 - AO353_13630 0.46 +0.3 3,026,092 - AO353_13630 0.46 -0.8 3,026,114 + AO353_13630 0.50 -2.0 3,026,114 + AO353_13630 0.50 +1.3 3,026,185 + AO353_13630 0.61 -1.5 3,026,243 + AO353_13630 0.70 -0.1 3,026,255 + +1.3 3,026,257 + AO353_13630 0.72 -0.5 3,026,257 + AO353_13630 0.72 +0.9 3,026,257 + AO353_13630 0.72 -0.7 3,026,257 + AO353_13630 0.72 -1.5 3,026,257 + AO353_13630 0.72 +1.9 3,026,257 + AO353_13630 0.72 -0.1 3,026,257 + AO353_13630 0.72 -0.3 3,026,257 + AO353_13630 0.72 -0.8 3,026,257 + AO353_13630 0.72 -0.9 3,026,258 - AO353_13630 0.72 +0.1 3,026,258 - AO353_13630 0.72 +0.3 3,026,258 - AO353_13630 0.72 -0.6 3,026,258 - AO353_13630 0.72 +0.6 3,026,258 - AO353_13630 0.72 +0.1 3,026,258 - AO353_13630 0.72 +1.3 3,026,258 - AO353_13630 0.72 -0.1 3,026,258 - AO353_13630 0.72 -0.3 3,026,258 - AO353_13630 0.72 +0.1 3,026,369 + AO353_13630 0.89 -1.3 3,026,370 - AO353_13630 0.89 -0.5 3,026,370 - AO353_13630 0.89 +0.7 3,026,402 + +1.3 3,026,480 + -0.4 3,026,531 + +0.8 3,026,531 + +0.6 3,026,531 + -0.3 3,026,531 + -2.6 3,026,532 - -0.0 3,026,532 - -1.5 3,026,532 - +0.8 3,026,532 - -0.4 3,026,532 - -1.9 3,026,544 - -0.5 3,026,565 + +0.3 3,026,565 + -0.9 3,026,565 + -2.0 3,026,663 + AO353_13635 0.22 -2.4 3,026,663 + AO353_13635 0.22 -2.0 3,026,663 + AO353_13635 0.22 -0.3 3,026,663 + AO353_13635 0.22 -1.9 3,026,663 + AO353_13635 0.22 -1.9 3,026,663 + AO353_13635 0.22 -1.7 3,026,663 + AO353_13635 0.22 -0.0 3,026,664 - AO353_13635 0.22 -0.3 3,026,664 - AO353_13635 0.22 -1.5 3,026,664 - AO353_13635 0.22 -1.9 3,026,664 - AO353_13635 0.22 -2.1 3,026,917 + AO353_13635 0.65 -0.8 3,026,960 + AO353_13635 0.72 -1.3 3,026,960 + AO353_13635 0.72 -1.2 3,026,960 + AO353_13635 0.72 +1.3 3,026,961 - AO353_13635 0.72 -1.5 3,026,961 - AO353_13635 0.72 +0.5 3,026,961 - AO353_13635 0.72 -1.2 3,026,961 - AO353_13635 0.72 -1.7 3,026,961 - AO353_13635 0.72 +0.1 3,026,961 - AO353_13635 0.72 +1.4 3,026,961 - AO353_13635 0.72 -1.4 3,026,961 - AO353_13635 0.72 -1.7 3,027,080 + -1.6 3,027,080 + -0.4 3,027,102 - -2.3 3,027,165 + -0.3 3,027,165 + -0.1 3,027,165 + +0.5 3,027,289 + +0.8 3,027,290 - +1.3 3,027,356 + +0.6 3,027,357 - -0.3 3,027,357 - +1.3
Or see this region's nucleotide sequence