Experiment: Furfuryl Alcohol 0.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_10665 and AO353_10670 are separated by 13 nucleotides AO353_10670 and AO353_10675 are separated by 163 nucleotides
AO353_10665: AO353_10665 - coproporphyrinogen III oxidase, at 2,337,729 to 2,338,643
_10665
AO353_10670: AO353_10670 - shikimate dehydrogenase, at 2,338,657 to 2,339,478
_10670
AO353_10675: AO353_10675 - SulP family inorganic anion transporter, at 2,339,642 to 2,341,210
_10675
Position (kb)
2338
2339
2340 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2337.658 kb on + strand at 2338.666 kb on + strand at 2338.666 kb on + strand at 2338.666 kb on + strand at 2338.667 kb on - strand at 2338.667 kb on - strand at 2338.667 kb on - strand at 2338.673 kb on + strand at 2338.673 kb on + strand at 2338.674 kb on - strand at 2338.698 kb on + strand at 2338.698 kb on + strand at 2338.698 kb on + strand at 2338.698 kb on + strand at 2338.698 kb on + strand at 2338.699 kb on - strand at 2338.699 kb on - strand at 2338.699 kb on - strand at 2338.753 kb on + strand, within AO353_10670 at 2338.753 kb on + strand, within AO353_10670 at 2338.753 kb on + strand, within AO353_10670 at 2338.753 kb on + strand, within AO353_10670 at 2338.753 kb on + strand, within AO353_10670 at 2338.754 kb on - strand, within AO353_10670 at 2338.754 kb on - strand, within AO353_10670 at 2338.754 kb on - strand, within AO353_10670 at 2338.754 kb on - strand, within AO353_10670 at 2338.754 kb on - strand, within AO353_10670 at 2338.858 kb on + strand, within AO353_10670 at 2339.208 kb on + strand, within AO353_10670 at 2339.208 kb on + strand, within AO353_10670 at 2339.290 kb on + strand, within AO353_10670 at 2339.290 kb on + strand, within AO353_10670 at 2339.302 kb on + strand, within AO353_10670 at 2339.302 kb on + strand, within AO353_10670 at 2339.302 kb on + strand, within AO353_10670 at 2339.302 kb on + strand, within AO353_10670 at 2339.302 kb on + strand, within AO353_10670 at 2339.303 kb on - strand, within AO353_10670 at 2339.303 kb on - strand, within AO353_10670 at 2339.303 kb on - strand, within AO353_10670 at 2339.303 kb on - strand, within AO353_10670 at 2339.303 kb on - strand, within AO353_10670 at 2339.303 kb on - strand, within AO353_10670 at 2339.303 kb on - strand, within AO353_10670 at 2339.303 kb on - strand, within AO353_10670 at 2339.303 kb on - strand, within AO353_10670 at 2339.423 kb on + strand at 2339.476 kb on + strand at 2339.477 kb on - strand at 2339.477 kb on - strand at 2339.477 kb on - strand at 2339.574 kb on - strand at 2339.630 kb on + strand at 2339.630 kb on + strand at 2339.630 kb on + strand at 2339.630 kb on + strand at 2339.630 kb on + strand at 2339.631 kb on - strand at 2339.631 kb on - strand at 2339.631 kb on - strand at 2339.780 kb on + strand at 2339.781 kb on - strand at 2339.781 kb on - strand at 2339.790 kb on + strand at 2339.790 kb on + strand at 2339.790 kb on + strand at 2339.808 kb on + strand, within AO353_10675 at 2339.808 kb on + strand, within AO353_10675 at 2339.808 kb on + strand, within AO353_10675 at 2339.808 kb on + strand, within AO353_10675 at 2339.808 kb on + strand, within AO353_10675 at 2339.808 kb on + strand, within AO353_10675 at 2339.808 kb on + strand, within AO353_10675 at 2339.808 kb on + strand, within AO353_10675 at 2339.808 kb on + strand, within AO353_10675 at 2339.808 kb on + strand, within AO353_10675 at 2339.808 kb on + strand, within AO353_10675 at 2339.808 kb on + strand, within AO353_10675 at 2339.808 kb on + strand, within AO353_10675 at 2339.808 kb on + strand, within AO353_10675 at 2339.808 kb on + strand, within AO353_10675 at 2339.808 kb on + strand, within AO353_10675 at 2339.808 kb on + strand, within AO353_10675 at 2339.809 kb on - strand, within AO353_10675 at 2339.809 kb on - strand, within AO353_10675 at 2339.809 kb on - strand, within AO353_10675 at 2339.809 kb on - strand, within AO353_10675 at 2339.809 kb on - strand, within AO353_10675 at 2339.809 kb on - strand, within AO353_10675 at 2339.809 kb on - strand, within AO353_10675 at 2339.809 kb on - strand, within AO353_10675 at 2339.809 kb on - strand, within AO353_10675 at 2339.809 kb on - strand, within AO353_10675 at 2339.809 kb on - strand, within AO353_10675 at 2339.809 kb on - strand, within AO353_10675 at 2339.809 kb on - strand, within AO353_10675 at 2339.809 kb on - strand, within AO353_10675 at 2339.822 kb on + strand, within AO353_10675 at 2339.822 kb on + strand, within AO353_10675 at 2339.842 kb on + strand, within AO353_10675 at 2339.842 kb on + strand, within AO353_10675 at 2339.842 kb on + strand, within AO353_10675 at 2339.842 kb on + strand, within AO353_10675 at 2339.842 kb on + strand, within AO353_10675 at 2339.842 kb on + strand, within AO353_10675 at 2339.842 kb on + strand, within AO353_10675 at 2339.842 kb on + strand, within AO353_10675 at 2339.842 kb on + strand, within AO353_10675 at 2339.842 kb on + strand, within AO353_10675 at 2339.842 kb on + strand, within AO353_10675 at 2339.843 kb on - strand, within AO353_10675 at 2339.843 kb on - strand, within AO353_10675 at 2339.843 kb on - strand, within AO353_10675 at 2339.843 kb on - strand, within AO353_10675 at 2339.843 kb on - strand, within AO353_10675 at 2339.843 kb on - strand, within AO353_10675 at 2339.865 kb on + strand, within AO353_10675 at 2339.865 kb on + strand, within AO353_10675 at 2339.866 kb on - strand, within AO353_10675 at 2339.866 kb on - strand, within AO353_10675 at 2339.964 kb on + strand, within AO353_10675 at 2339.994 kb on + strand, within AO353_10675 at 2339.995 kb on - strand, within AO353_10675 at 2339.995 kb on - strand, within AO353_10675 at 2340.008 kb on + strand, within AO353_10675 at 2340.008 kb on + strand, within AO353_10675 at 2340.008 kb on + strand, within AO353_10675 at 2340.009 kb on - strand, within AO353_10675 at 2340.009 kb on - strand, within AO353_10675 at 2340.009 kb on - strand, within AO353_10675 at 2340.009 kb on - strand, within AO353_10675 at 2340.009 kb on - strand, within AO353_10675 at 2340.020 kb on + strand, within AO353_10675 at 2340.020 kb on + strand, within AO353_10675 at 2340.020 kb on + strand, within AO353_10675 at 2340.021 kb on - strand, within AO353_10675 at 2340.021 kb on - strand, within AO353_10675 at 2340.021 kb on - strand, within AO353_10675 at 2340.155 kb on - strand, within AO353_10675 at 2340.155 kb on - strand, within AO353_10675 at 2340.161 kb on + strand, within AO353_10675 at 2340.247 kb on - strand, within AO353_10675 at 2340.353 kb on + strand, within AO353_10675 at 2340.353 kb on + strand, within AO353_10675 at 2340.354 kb on - strand, within AO353_10675 at 2340.354 kb on - strand, within AO353_10675 at 2340.354 kb on - strand, within AO353_10675 at 2340.354 kb on - strand, within AO353_10675
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.25 vol% remove 2,337,658 + +0.8 2,338,666 + -2.0 2,338,666 + -0.7 2,338,666 + +0.5 2,338,667 - +1.0 2,338,667 - -1.0 2,338,667 - -0.8 2,338,673 + -0.0 2,338,673 + -1.2 2,338,674 - -0.8 2,338,698 + -1.0 2,338,698 + -2.6 2,338,698 + -2.0 2,338,698 + -2.5 2,338,698 + -1.8 2,338,699 - -1.6 2,338,699 - -2.2 2,338,699 - -0.6 2,338,753 + AO353_10670 0.12 -2.0 2,338,753 + AO353_10670 0.12 -1.9 2,338,753 + AO353_10670 0.12 -2.3 2,338,753 + AO353_10670 0.12 -3.3 2,338,753 + AO353_10670 0.12 -2.2 2,338,754 - AO353_10670 0.12 -0.5 2,338,754 - AO353_10670 0.12 -1.3 2,338,754 - AO353_10670 0.12 -1.0 2,338,754 - AO353_10670 0.12 -2.8 2,338,754 - AO353_10670 0.12 -1.5 2,338,858 + AO353_10670 0.24 -2.7 2,339,208 + AO353_10670 0.67 -2.6 2,339,208 + AO353_10670 0.67 -1.5 2,339,290 + AO353_10670 0.77 -1.3 2,339,290 + AO353_10670 0.77 -2.0 2,339,302 + AO353_10670 0.78 -2.4 2,339,302 + AO353_10670 0.78 -1.6 2,339,302 + AO353_10670 0.78 -2.5 2,339,302 + AO353_10670 0.78 -0.0 2,339,302 + AO353_10670 0.78 -2.4 2,339,303 - AO353_10670 0.79 -1.3 2,339,303 - AO353_10670 0.79 -3.0 2,339,303 - AO353_10670 0.79 -2.5 2,339,303 - AO353_10670 0.79 -2.9 2,339,303 - AO353_10670 0.79 -2.4 2,339,303 - AO353_10670 0.79 -1.6 2,339,303 - AO353_10670 0.79 -2.4 2,339,303 - AO353_10670 0.79 -2.3 2,339,303 - AO353_10670 0.79 -0.5 2,339,423 + -1.9 2,339,476 + +1.2 2,339,477 - +1.1 2,339,477 - -0.3 2,339,477 - -0.5 2,339,574 - -0.6 2,339,630 + -2.2 2,339,630 + +1.1 2,339,630 + -1.5 2,339,630 + -2.0 2,339,630 + -0.3 2,339,631 - -0.0 2,339,631 - -0.3 2,339,631 - -0.0 2,339,780 + +1.1 2,339,781 - +1.0 2,339,781 - -0.8 2,339,790 + +1.1 2,339,790 + -1.0 2,339,790 + -0.0 2,339,808 + AO353_10675 0.11 +1.1 2,339,808 + AO353_10675 0.11 +0.5 2,339,808 + AO353_10675 0.11 +0.4 2,339,808 + AO353_10675 0.11 -0.6 2,339,808 + AO353_10675 0.11 +2.4 2,339,808 + AO353_10675 0.11 +1.0 2,339,808 + AO353_10675 0.11 -0.3 2,339,808 + AO353_10675 0.11 -0.6 2,339,808 + AO353_10675 0.11 -0.8 2,339,808 + AO353_10675 0.11 +0.8 2,339,808 + AO353_10675 0.11 -1.0 2,339,808 + AO353_10675 0.11 +0.2 2,339,808 + AO353_10675 0.11 -1.8 2,339,808 + AO353_10675 0.11 -0.4 2,339,808 + AO353_10675 0.11 -0.5 2,339,808 + AO353_10675 0.11 +1.4 2,339,808 + AO353_10675 0.11 -1.0 2,339,809 - AO353_10675 0.11 +0.1 2,339,809 - AO353_10675 0.11 -0.8 2,339,809 - AO353_10675 0.11 -0.0 2,339,809 - AO353_10675 0.11 -1.0 2,339,809 - AO353_10675 0.11 -0.0 2,339,809 - AO353_10675 0.11 -1.0 2,339,809 - AO353_10675 0.11 -0.3 2,339,809 - AO353_10675 0.11 -0.2 2,339,809 - AO353_10675 0.11 +0.2 2,339,809 - AO353_10675 0.11 +0.4 2,339,809 - AO353_10675 0.11 +0.2 2,339,809 - AO353_10675 0.11 -1.3 2,339,809 - AO353_10675 0.11 -0.5 2,339,809 - AO353_10675 0.11 +1.0 2,339,822 + AO353_10675 0.11 -0.0 2,339,822 + AO353_10675 0.11 +0.7 2,339,842 + AO353_10675 0.13 -0.3 2,339,842 + AO353_10675 0.13 -1.0 2,339,842 + AO353_10675 0.13 +0.6 2,339,842 + AO353_10675 0.13 +1.5 2,339,842 + AO353_10675 0.13 +1.7 2,339,842 + AO353_10675 0.13 -0.0 2,339,842 + AO353_10675 0.13 -1.6 2,339,842 + AO353_10675 0.13 -2.3 2,339,842 + AO353_10675 0.13 +0.7 2,339,842 + AO353_10675 0.13 +1.2 2,339,842 + AO353_10675 0.13 +0.3 2,339,843 - AO353_10675 0.13 +0.5 2,339,843 - AO353_10675 0.13 +1.1 2,339,843 - AO353_10675 0.13 +0.3 2,339,843 - AO353_10675 0.13 -2.0 2,339,843 - AO353_10675 0.13 +0.5 2,339,843 - AO353_10675 0.13 +0.4 2,339,865 + AO353_10675 0.14 -2.5 2,339,865 + AO353_10675 0.14 +0.4 2,339,866 - AO353_10675 0.14 +0.5 2,339,866 - AO353_10675 0.14 +0.8 2,339,964 + AO353_10675 0.21 -0.2 2,339,994 + AO353_10675 0.22 -0.2 2,339,995 - AO353_10675 0.22 -0.6 2,339,995 - AO353_10675 0.22 -0.5 2,340,008 + AO353_10675 0.23 -0.0 2,340,008 + AO353_10675 0.23 +0.7 2,340,008 + AO353_10675 0.23 -0.7 2,340,009 - AO353_10675 0.23 -0.5 2,340,009 - AO353_10675 0.23 +0.7 2,340,009 - AO353_10675 0.23 -0.0 2,340,009 - AO353_10675 0.23 -0.5 2,340,009 - AO353_10675 0.23 +0.5 2,340,020 + AO353_10675 0.24 -0.0 2,340,020 + AO353_10675 0.24 -0.4 2,340,020 + AO353_10675 0.24 +0.5 2,340,021 - AO353_10675 0.24 +0.7 2,340,021 - AO353_10675 0.24 -0.1 2,340,021 - AO353_10675 0.24 +1.9 2,340,155 - AO353_10675 0.33 -0.0 2,340,155 - AO353_10675 0.33 +1.2 2,340,161 + AO353_10675 0.33 -1.2 2,340,247 - AO353_10675 0.39 +0.7 2,340,353 + AO353_10675 0.45 +0.4 2,340,353 + AO353_10675 0.45 -0.0 2,340,354 - AO353_10675 0.45 +0.1 2,340,354 - AO353_10675 0.45 -0.7 2,340,354 - AO353_10675 0.45 +1.4 2,340,354 - AO353_10675 0.45 -0.9
Or see this region's nucleotide sequence