Experiment: Furfuryl Alcohol 0.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_08610 and AO353_08615 are separated by 68 nucleotides AO353_08615 and AO353_08620 are separated by 314 nucleotides AO353_08620 and AO353_08625 are separated by 41 nucleotides
AO353_08610: AO353_08610 - hypothetical protein, at 1,892,882 to 1,893,841
_08610
AO353_08615: AO353_08615 - hypothetical protein, at 1,893,910 to 1,894,824
_08615
AO353_08620: AO353_08620 - hypothetical protein, at 1,895,139 to 1,895,510
_08620
AO353_08625: AO353_08625 - hypothetical protein, at 1,895,552 to 1,896,271
_08625
Position (kb)
1893
1894
1895 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1892.972 kb on + strand at 1892.973 kb on - strand at 1893.206 kb on + strand, within AO353_08610 at 1893.301 kb on - strand, within AO353_08610 at 1893.301 kb on - strand, within AO353_08610 at 1893.606 kb on + strand, within AO353_08610 at 1893.607 kb on - strand, within AO353_08610 at 1893.661 kb on + strand, within AO353_08610 at 1893.662 kb on - strand, within AO353_08610 at 1893.670 kb on + strand, within AO353_08610 at 1893.670 kb on + strand, within AO353_08610 at 1893.670 kb on + strand, within AO353_08610 at 1893.671 kb on - strand, within AO353_08610 at 1893.671 kb on - strand, within AO353_08610 at 1893.671 kb on - strand, within AO353_08610 at 1893.671 kb on - strand, within AO353_08610 at 1893.671 kb on - strand, within AO353_08610 at 1893.770 kb on - strand at 1893.865 kb on + strand at 1893.866 kb on - strand at 1893.894 kb on + strand at 1894.005 kb on + strand, within AO353_08615 at 1894.005 kb on + strand, within AO353_08615 at 1894.020 kb on + strand, within AO353_08615 at 1894.082 kb on + strand, within AO353_08615 at 1894.147 kb on - strand, within AO353_08615 at 1894.170 kb on - strand, within AO353_08615 at 1894.251 kb on + strand, within AO353_08615 at 1894.252 kb on - strand, within AO353_08615 at 1894.252 kb on - strand, within AO353_08615 at 1894.341 kb on + strand, within AO353_08615 at 1894.344 kb on + strand, within AO353_08615 at 1894.344 kb on + strand, within AO353_08615 at 1894.344 kb on + strand, within AO353_08615 at 1894.345 kb on - strand, within AO353_08615 at 1894.345 kb on - strand, within AO353_08615 at 1894.416 kb on + strand, within AO353_08615 at 1894.418 kb on + strand, within AO353_08615 at 1894.418 kb on + strand, within AO353_08615 at 1894.419 kb on - strand, within AO353_08615 at 1894.425 kb on + strand, within AO353_08615 at 1894.548 kb on - strand, within AO353_08615 at 1894.548 kb on - strand, within AO353_08615 at 1894.569 kb on - strand, within AO353_08615 at 1894.584 kb on + strand, within AO353_08615 at 1894.766 kb on - strand at 1894.770 kb on - strand at 1894.891 kb on + strand at 1894.900 kb on - strand at 1894.902 kb on + strand at 1894.932 kb on - strand at 1894.960 kb on + strand at 1894.961 kb on - strand at 1895.010 kb on - strand at 1895.061 kb on - strand at 1895.120 kb on - strand at 1895.121 kb on + strand at 1895.124 kb on - strand at 1895.124 kb on - strand at 1895.124 kb on - strand at 1895.168 kb on + strand at 1895.308 kb on - strand, within AO353_08620 at 1895.498 kb on - strand at 1895.623 kb on + strand at 1895.684 kb on - strand, within AO353_08625 at 1895.685 kb on + strand, within AO353_08625 at 1895.691 kb on - strand, within AO353_08625 at 1895.714 kb on - strand, within AO353_08625 at 1895.736 kb on + strand, within AO353_08625 at 1895.736 kb on + strand, within AO353_08625 at 1895.736 kb on + strand, within AO353_08625 at 1895.736 kb on + strand, within AO353_08625 at 1895.736 kb on + strand, within AO353_08625 at 1895.736 kb on + strand, within AO353_08625 at 1895.736 kb on + strand, within AO353_08625 at 1895.737 kb on - strand, within AO353_08625 at 1895.737 kb on - strand, within AO353_08625 at 1895.815 kb on + strand, within AO353_08625 at 1895.816 kb on - strand, within AO353_08625 at 1895.817 kb on + strand, within AO353_08625 at 1895.818 kb on - strand, within AO353_08625 at 1895.818 kb on - strand, within AO353_08625 at 1895.818 kb on - strand, within AO353_08625 at 1895.818 kb on - strand, within AO353_08625 at 1895.818 kb on - strand, within AO353_08625 at 1895.818 kb on - strand, within AO353_08625 at 1895.818 kb on - strand, within AO353_08625
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.25 vol% remove 1,892,972 + -0.4 1,892,973 - -0.3 1,893,206 + AO353_08610 0.34 -0.1 1,893,301 - AO353_08610 0.44 -0.6 1,893,301 - AO353_08610 0.44 +0.4 1,893,606 + AO353_08610 0.75 -0.1 1,893,607 - AO353_08610 0.76 +0.1 1,893,661 + AO353_08610 0.81 +0.9 1,893,662 - AO353_08610 0.81 -1.1 1,893,670 + AO353_08610 0.82 +1.4 1,893,670 + AO353_08610 0.82 +0.4 1,893,670 + AO353_08610 0.82 -1.6 1,893,671 - AO353_08610 0.82 +0.4 1,893,671 - AO353_08610 0.82 +1.4 1,893,671 - AO353_08610 0.82 +0.3 1,893,671 - AO353_08610 0.82 +0.4 1,893,671 - AO353_08610 0.82 +0.2 1,893,770 - -1.1 1,893,865 + -0.0 1,893,866 - +1.4 1,893,894 + -0.1 1,894,005 + AO353_08615 0.10 -1.0 1,894,005 + AO353_08615 0.10 -1.4 1,894,020 + AO353_08615 0.12 +0.4 1,894,082 + AO353_08615 0.19 +0.6 1,894,147 - AO353_08615 0.26 -0.3 1,894,170 - AO353_08615 0.28 +0.4 1,894,251 + AO353_08615 0.37 -0.1 1,894,252 - AO353_08615 0.37 +1.0 1,894,252 - AO353_08615 0.37 -0.7 1,894,341 + AO353_08615 0.47 +0.4 1,894,344 + AO353_08615 0.47 +0.4 1,894,344 + AO353_08615 0.47 +0.2 1,894,344 + AO353_08615 0.47 -0.8 1,894,345 - AO353_08615 0.48 -2.9 1,894,345 - AO353_08615 0.48 -0.0 1,894,416 + AO353_08615 0.55 -1.4 1,894,418 + AO353_08615 0.56 -0.5 1,894,418 + AO353_08615 0.56 -0.6 1,894,419 - AO353_08615 0.56 +0.2 1,894,425 + AO353_08615 0.56 -1.1 1,894,548 - AO353_08615 0.70 -1.4 1,894,548 - AO353_08615 0.70 -1.0 1,894,569 - AO353_08615 0.72 +0.1 1,894,584 + AO353_08615 0.74 -0.6 1,894,766 - -0.6 1,894,770 - -0.0 1,894,891 + +1.4 1,894,900 - -0.3 1,894,902 + -0.7 1,894,932 - -0.3 1,894,960 + -1.5 1,894,961 - -0.1 1,895,010 - -0.1 1,895,061 - -0.4 1,895,120 - -3.1 1,895,121 + -0.4 1,895,124 - -1.4 1,895,124 - +2.4 1,895,124 - -1.1 1,895,168 + -0.9 1,895,308 - AO353_08620 0.45 +0.3 1,895,498 - -0.6 1,895,623 + +1.5 1,895,684 - AO353_08625 0.18 -0.9 1,895,685 + AO353_08625 0.18 -2.0 1,895,691 - AO353_08625 0.19 -0.1 1,895,714 - AO353_08625 0.23 +0.1 1,895,736 + AO353_08625 0.26 -0.5 1,895,736 + AO353_08625 0.26 -0.9 1,895,736 + AO353_08625 0.26 +0.9 1,895,736 + AO353_08625 0.26 -0.1 1,895,736 + AO353_08625 0.26 +0.6 1,895,736 + AO353_08625 0.26 -2.4 1,895,736 + AO353_08625 0.26 +2.6 1,895,737 - AO353_08625 0.26 +0.5 1,895,737 - AO353_08625 0.26 -1.1 1,895,815 + AO353_08625 0.37 -0.1 1,895,816 - AO353_08625 0.37 -1.1 1,895,817 + AO353_08625 0.37 +0.1 1,895,818 - AO353_08625 0.37 +1.5 1,895,818 - AO353_08625 0.37 +0.0 1,895,818 - AO353_08625 0.37 +0.4 1,895,818 - AO353_08625 0.37 -0.0 1,895,818 - AO353_08625 0.37 -0.7 1,895,818 - AO353_08625 0.37 +1.1 1,895,818 - AO353_08625 0.37 +0.5
Or see this region's nucleotide sequence