Experiment: Furfuryl Alcohol 0.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_04335 and AO353_04340 are separated by 167 nucleotides AO353_04340 and AO353_04345 are separated by 184 nucleotides
AO353_04335: AO353_04335 - hypothetical protein, at 934,746 to 935,699
_04335
AO353_04340: AO353_04340 - hypothetical protein, at 935,867 to 936,154
_04340
AO353_04345: AO353_04345 - histidine kinase, at 936,339 to 937,682
_04345
Position (kb) 935
936
937 Strain fitness (log2 ratio) -2
-1
0
1
2 at 934.990 kb on - strand, within AO353_04335 at 934.990 kb on - strand, within AO353_04335 at 934.990 kb on - strand, within AO353_04335 at 935.022 kb on + strand, within AO353_04335 at 935.023 kb on - strand, within AO353_04335 at 935.139 kb on + strand, within AO353_04335 at 935.139 kb on + strand, within AO353_04335 at 935.139 kb on + strand, within AO353_04335 at 935.295 kb on + strand, within AO353_04335 at 935.296 kb on - strand, within AO353_04335 at 935.511 kb on + strand, within AO353_04335 at 935.512 kb on - strand, within AO353_04335 at 935.512 kb on - strand, within AO353_04335 at 935.512 kb on - strand, within AO353_04335 at 935.512 kb on - strand, within AO353_04335 at 935.512 kb on - strand, within AO353_04335 at 935.525 kb on + strand, within AO353_04335 at 935.525 kb on + strand, within AO353_04335 at 935.525 kb on + strand, within AO353_04335 at 935.525 kb on + strand, within AO353_04335 at 935.525 kb on + strand, within AO353_04335 at 935.525 kb on + strand, within AO353_04335 at 935.526 kb on - strand, within AO353_04335 at 935.526 kb on - strand, within AO353_04335 at 935.526 kb on - strand, within AO353_04335 at 935.526 kb on - strand, within AO353_04335 at 935.581 kb on + strand, within AO353_04335 at 935.581 kb on + strand, within AO353_04335 at 935.582 kb on - strand, within AO353_04335 at 935.582 kb on - strand, within AO353_04335 at 935.582 kb on - strand, within AO353_04335 at 935.582 kb on - strand, within AO353_04335 at 935.582 kb on - strand, within AO353_04335 at 935.582 kb on - strand, within AO353_04335 at 935.620 kb on - strand at 935.620 kb on - strand at 935.655 kb on + strand at 935.761 kb on + strand at 935.762 kb on - strand at 935.762 kb on - strand at 935.818 kb on + strand at 935.818 kb on + strand at 935.819 kb on - strand at 935.819 kb on - strand at 935.831 kb on + strand at 935.999 kb on - strand, within AO353_04340 at 936.052 kb on + strand, within AO353_04340 at 936.053 kb on - strand, within AO353_04340 at 936.085 kb on + strand, within AO353_04340 at 936.104 kb on + strand, within AO353_04340 at 936.104 kb on + strand, within AO353_04340 at 936.105 kb on - strand, within AO353_04340 at 936.137 kb on + strand at 936.137 kb on + strand at 936.137 kb on + strand at 936.137 kb on + strand at 936.138 kb on - strand at 936.138 kb on - strand at 936.145 kb on + strand at 936.145 kb on + strand at 936.145 kb on + strand at 936.145 kb on + strand at 936.146 kb on - strand at 936.146 kb on - strand at 936.171 kb on + strand at 936.172 kb on - strand at 936.172 kb on - strand at 936.172 kb on - strand at 936.201 kb on + strand at 936.201 kb on + strand at 936.202 kb on - strand at 936.202 kb on - strand at 936.202 kb on - strand at 936.202 kb on - strand at 936.202 kb on - strand at 936.247 kb on + strand at 936.247 kb on + strand at 936.247 kb on + strand at 936.247 kb on + strand at 936.247 kb on + strand at 936.248 kb on - strand at 936.248 kb on - strand at 936.248 kb on - strand at 936.248 kb on - strand at 936.248 kb on - strand at 936.258 kb on + strand at 936.258 kb on + strand at 936.334 kb on + strand at 936.334 kb on + strand at 936.334 kb on + strand at 936.334 kb on + strand at 936.334 kb on + strand at 936.335 kb on - strand at 936.335 kb on - strand at 936.335 kb on - strand at 936.335 kb on - strand at 936.335 kb on - strand at 936.335 kb on - strand at 936.335 kb on - strand at 936.398 kb on + strand at 936.400 kb on + strand at 936.400 kb on + strand at 936.400 kb on + strand at 936.400 kb on + strand at 936.400 kb on + strand at 936.400 kb on + strand at 936.401 kb on - strand at 936.401 kb on - strand at 936.401 kb on - strand at 936.401 kb on - strand at 936.401 kb on - strand at 936.401 kb on - strand at 936.421 kb on + strand at 936.421 kb on + strand at 936.421 kb on + strand at 936.421 kb on + strand at 936.421 kb on + strand at 936.421 kb on + strand at 936.421 kb on + strand at 936.421 kb on + strand at 936.421 kb on + strand at 936.421 kb on + strand at 936.421 kb on + strand at 936.422 kb on - strand at 936.422 kb on - strand at 936.422 kb on - strand at 936.422 kb on - strand at 936.422 kb on - strand at 936.422 kb on - strand at 936.422 kb on - strand at 936.422 kb on - strand at 936.422 kb on - strand at 936.425 kb on + strand at 936.425 kb on + strand at 936.425 kb on + strand at 936.425 kb on + strand at 936.425 kb on + strand at 936.432 kb on + strand at 936.432 kb on + strand at 936.433 kb on - strand at 936.433 kb on - strand at 936.433 kb on - strand at 936.433 kb on - strand at 936.601 kb on + strand, within AO353_04345 at 936.601 kb on + strand, within AO353_04345 at 936.601 kb on + strand, within AO353_04345 at 936.601 kb on + strand, within AO353_04345 at 936.601 kb on + strand, within AO353_04345 at 936.601 kb on + strand, within AO353_04345 at 936.601 kb on + strand, within AO353_04345 at 936.601 kb on + strand, within AO353_04345 at 936.601 kb on + strand, within AO353_04345 at 936.601 kb on + strand, within AO353_04345 at 936.601 kb on + strand, within AO353_04345 at 936.602 kb on - strand, within AO353_04345 at 936.602 kb on - strand, within AO353_04345 at 936.602 kb on - strand, within AO353_04345 at 936.602 kb on - strand, within AO353_04345 at 936.602 kb on - strand, within AO353_04345 at 936.602 kb on - strand, within AO353_04345 at 936.602 kb on - strand, within AO353_04345 at 936.642 kb on + strand, within AO353_04345 at 936.643 kb on - strand, within AO353_04345 at 936.795 kb on + strand, within AO353_04345 at 936.795 kb on + strand, within AO353_04345 at 936.796 kb on - strand, within AO353_04345 at 936.817 kb on + strand, within AO353_04345 at 936.818 kb on - strand, within AO353_04345 at 936.818 kb on - strand, within AO353_04345 at 936.855 kb on + strand, within AO353_04345 at 936.855 kb on + strand, within AO353_04345 at 936.855 kb on + strand, within AO353_04345 at 936.856 kb on - strand, within AO353_04345 at 936.983 kb on + strand, within AO353_04345 at 936.983 kb on + strand, within AO353_04345 at 936.983 kb on + strand, within AO353_04345 at 936.983 kb on + strand, within AO353_04345 at 936.983 kb on + strand, within AO353_04345 at 936.983 kb on + strand, within AO353_04345 at 936.983 kb on + strand, within AO353_04345 at 936.984 kb on - strand, within AO353_04345 at 936.984 kb on - strand, within AO353_04345 at 936.984 kb on - strand, within AO353_04345 at 936.984 kb on - strand, within AO353_04345 at 936.984 kb on - strand, within AO353_04345 at 936.984 kb on - strand, within AO353_04345 at 936.984 kb on - strand, within AO353_04345 at 936.984 kb on - strand, within AO353_04345 at 936.984 kb on - strand, within AO353_04345 at 936.984 kb on - strand, within AO353_04345 at 936.984 kb on - strand, within AO353_04345 at 936.984 kb on - strand, within AO353_04345 at 937.025 kb on - strand, within AO353_04345 at 937.099 kb on + strand, within AO353_04345 at 937.099 kb on + strand, within AO353_04345
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.25 vol% remove 934,990 - AO353_04335 0.26 +0.1 934,990 - AO353_04335 0.26 +0.1 934,990 - AO353_04335 0.26 +0.6 935,022 + AO353_04335 0.29 -0.9 935,023 - AO353_04335 0.29 +0.1 935,139 + AO353_04335 0.41 +0.3 935,139 + AO353_04335 0.41 +0.1 935,139 + AO353_04335 0.41 +1.1 935,295 + AO353_04335 0.58 -0.6 935,296 - AO353_04335 0.58 -0.5 935,511 + AO353_04335 0.80 -0.9 935,512 - AO353_04335 0.80 -0.5 935,512 - AO353_04335 0.80 +0.3 935,512 - AO353_04335 0.80 -0.5 935,512 - AO353_04335 0.80 +0.3 935,512 - AO353_04335 0.80 +0.1 935,525 + AO353_04335 0.82 -0.7 935,525 + AO353_04335 0.82 -2.2 935,525 + AO353_04335 0.82 -1.4 935,525 + AO353_04335 0.82 +0.1 935,525 + AO353_04335 0.82 +0.6 935,525 + AO353_04335 0.82 +0.7 935,526 - AO353_04335 0.82 -1.7 935,526 - AO353_04335 0.82 +0.1 935,526 - AO353_04335 0.82 -0.4 935,526 - AO353_04335 0.82 +1.1 935,581 + AO353_04335 0.88 +0.2 935,581 + AO353_04335 0.88 +1.7 935,582 - AO353_04335 0.88 -0.2 935,582 - AO353_04335 0.88 +0.2 935,582 - AO353_04335 0.88 +0.5 935,582 - AO353_04335 0.88 -1.6 935,582 - AO353_04335 0.88 +0.5 935,582 - AO353_04335 0.88 -0.1 935,620 - -0.9 935,620 - -0.2 935,655 + +0.8 935,761 + -0.9 935,762 - +0.8 935,762 - +0.5 935,818 + -0.9 935,818 + -2.2 935,819 - -0.7 935,819 - -1.6 935,831 + +0.9 935,999 - AO353_04340 0.46 -0.5 936,052 + AO353_04340 0.64 -0.5 936,053 - AO353_04340 0.65 -1.2 936,085 + AO353_04340 0.76 -0.0 936,104 + AO353_04340 0.82 +0.5 936,104 + AO353_04340 0.82 -0.9 936,105 - AO353_04340 0.83 -0.7 936,137 + +1.1 936,137 + -0.5 936,137 + +0.5 936,137 + +1.1 936,138 - +0.1 936,138 - +1.1 936,145 + +0.4 936,145 + -2.1 936,145 + -2.2 936,145 + -0.4 936,146 - -0.8 936,146 - -0.7 936,171 + +0.5 936,172 - -1.5 936,172 - -0.5 936,172 - -0.6 936,201 + -1.2 936,201 + -0.2 936,202 - -0.2 936,202 - +2.4 936,202 - -1.4 936,202 - -0.5 936,202 - +0.5 936,247 + +1.1 936,247 + -1.1 936,247 + -0.7 936,247 + -1.1 936,247 + -1.2 936,248 - +0.3 936,248 - -0.8 936,248 - +0.1 936,248 - +2.1 936,248 - -0.5 936,258 + +0.5 936,258 + -0.1 936,334 + -0.1 936,334 + -0.4 936,334 + +0.1 936,334 + +0.7 936,334 + +0.1 936,335 - -0.2 936,335 - -0.9 936,335 - -0.2 936,335 - -0.6 936,335 - -0.3 936,335 - -0.5 936,335 - -0.2 936,398 + +1.1 936,400 + +0.9 936,400 + +1.7 936,400 + -2.6 936,400 + -1.5 936,400 + -0.4 936,400 + -1.9 936,401 - -0.4 936,401 - +0.1 936,401 - +1.1 936,401 - -0.9 936,401 - -0.6 936,401 - -0.5 936,421 + -0.1 936,421 + +0.6 936,421 + +0.5 936,421 + +1.5 936,421 + +0.2 936,421 + +0.1 936,421 + -0.3 936,421 + +0.8 936,421 + -0.1 936,421 + -0.5 936,421 + -1.0 936,422 - +0.9 936,422 - -1.0 936,422 - -0.2 936,422 - +1.5 936,422 - -1.2 936,422 - +0.7 936,422 - -0.1 936,422 - -1.5 936,422 - -1.5 936,425 + +1.8 936,425 + +0.1 936,425 + +0.4 936,425 + -0.5 936,425 + +0.9 936,432 + -0.9 936,432 + +0.9 936,433 - +0.4 936,433 - +0.5 936,433 - +1.0 936,433 - +1.1 936,601 + AO353_04345 0.19 -1.2 936,601 + AO353_04345 0.19 +0.3 936,601 + AO353_04345 0.19 -1.5 936,601 + AO353_04345 0.19 +0.3 936,601 + AO353_04345 0.19 -0.0 936,601 + AO353_04345 0.19 +0.1 936,601 + AO353_04345 0.19 -0.3 936,601 + AO353_04345 0.19 +1.2 936,601 + AO353_04345 0.19 -0.2 936,601 + AO353_04345 0.19 -1.5 936,601 + AO353_04345 0.19 +0.5 936,602 - AO353_04345 0.20 -0.3 936,602 - AO353_04345 0.20 +0.6 936,602 - AO353_04345 0.20 +1.7 936,602 - AO353_04345 0.20 -0.3 936,602 - AO353_04345 0.20 +0.2 936,602 - AO353_04345 0.20 +0.2 936,602 - AO353_04345 0.20 -0.5 936,642 + AO353_04345 0.23 -0.7 936,643 - AO353_04345 0.23 +0.4 936,795 + AO353_04345 0.34 +0.2 936,795 + AO353_04345 0.34 -1.7 936,796 - AO353_04345 0.34 -1.4 936,817 + AO353_04345 0.36 -0.9 936,818 - AO353_04345 0.36 -0.8 936,818 - AO353_04345 0.36 +0.8 936,855 + AO353_04345 0.38 +1.1 936,855 + AO353_04345 0.38 -0.3 936,855 + AO353_04345 0.38 -0.1 936,856 - AO353_04345 0.38 -1.4 936,983 + AO353_04345 0.48 +0.8 936,983 + AO353_04345 0.48 +1.4 936,983 + AO353_04345 0.48 +0.8 936,983 + AO353_04345 0.48 -0.5 936,983 + AO353_04345 0.48 +0.1 936,983 + AO353_04345 0.48 -1.2 936,983 + AO353_04345 0.48 -1.0 936,984 - AO353_04345 0.48 -2.1 936,984 - AO353_04345 0.48 +0.3 936,984 - AO353_04345 0.48 -1.5 936,984 - AO353_04345 0.48 -1.0 936,984 - AO353_04345 0.48 +0.1 936,984 - AO353_04345 0.48 +0.1 936,984 - AO353_04345 0.48 -1.0 936,984 - AO353_04345 0.48 +0.7 936,984 - AO353_04345 0.48 -1.4 936,984 - AO353_04345 0.48 -0.5 936,984 - AO353_04345 0.48 -0.5 936,984 - AO353_04345 0.48 +0.3 937,025 - AO353_04345 0.51 -1.1 937,099 + AO353_04345 0.57 +0.1 937,099 + AO353_04345 0.57 +1.1
Or see this region's nucleotide sequence