Experiment: Furfuryl Alcohol 0.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_01475 and AO353_01480 are separated by 345 nucleotides AO353_01480 and AO353_01485 overlap by 4 nucleotides
AO353_01475: AO353_01475 - hypothetical protein, at 316,517 to 316,891
_01475
AO353_01480: AO353_01480 - hypothetical protein, at 317,237 to 318,016
_01480
AO353_01485: AO353_01485 - ABC transporter, at 318,013 to 318,945
_01485
Position (kb) 317
318
319 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 316.275 kb on + strand at 316.275 kb on + strand at 316.276 kb on - strand at 316.276 kb on - strand at 316.276 kb on - strand at 316.368 kb on + strand at 316.368 kb on + strand at 316.374 kb on + strand at 316.374 kb on + strand at 316.375 kb on - strand at 316.375 kb on - strand at 316.389 kb on - strand at 316.455 kb on + strand at 316.456 kb on - strand at 316.456 kb on - strand at 316.509 kb on + strand at 316.509 kb on + strand at 316.509 kb on + strand at 316.510 kb on - strand at 316.510 kb on - strand at 316.510 kb on - strand at 316.510 kb on - strand at 316.513 kb on + strand at 316.513 kb on + strand at 316.513 kb on + strand at 316.513 kb on + strand at 316.513 kb on + strand at 316.513 kb on + strand at 316.513 kb on + strand at 316.513 kb on + strand at 316.513 kb on + strand at 316.513 kb on + strand at 316.513 kb on + strand at 316.513 kb on + strand at 316.513 kb on + strand at 316.513 kb on + strand at 316.513 kb on + strand at 316.514 kb on - strand at 316.514 kb on - strand at 316.514 kb on - strand at 316.514 kb on - strand at 316.514 kb on - strand at 316.514 kb on - strand at 316.514 kb on - strand at 316.514 kb on - strand at 316.514 kb on - strand at 316.514 kb on - strand at 316.565 kb on + strand, within AO353_01475 at 316.565 kb on + strand, within AO353_01475 at 316.622 kb on + strand, within AO353_01475 at 316.622 kb on + strand, within AO353_01475 at 316.889 kb on + strand at 316.933 kb on - strand at 316.933 kb on - strand at 317.117 kb on + strand at 317.117 kb on + strand at 317.131 kb on + strand at 317.132 kb on - strand at 317.158 kb on + strand at 317.158 kb on + strand at 317.159 kb on - strand at 317.159 kb on - strand at 317.159 kb on - strand at 317.159 kb on - strand at 317.159 kb on - strand at 317.159 kb on - strand at 317.161 kb on + strand at 317.161 kb on + strand at 317.162 kb on - strand at 317.162 kb on - strand at 317.162 kb on - strand at 317.162 kb on - strand at 317.162 kb on - strand at 317.162 kb on - strand at 317.238 kb on + strand at 317.238 kb on + strand at 317.238 kb on + strand at 317.238 kb on + strand at 317.239 kb on - strand at 317.239 kb on - strand at 317.239 kb on - strand at 317.286 kb on + strand at 317.286 kb on + strand at 317.286 kb on + strand at 317.286 kb on + strand at 317.286 kb on + strand at 317.286 kb on + strand at 317.286 kb on + strand at 317.286 kb on + strand at 317.286 kb on + strand at 317.286 kb on + strand at 317.286 kb on + strand at 317.287 kb on - strand at 317.287 kb on - strand at 317.287 kb on - strand at 317.287 kb on - strand at 317.287 kb on - strand at 317.294 kb on + strand at 317.294 kb on + strand at 317.295 kb on - strand at 317.304 kb on - strand at 317.304 kb on - strand at 317.317 kb on + strand, within AO353_01480 at 317.443 kb on - strand, within AO353_01480 at 317.443 kb on - strand, within AO353_01480 at 317.443 kb on - strand, within AO353_01480 at 317.461 kb on - strand, within AO353_01480 at 317.461 kb on - strand, within AO353_01480 at 317.461 kb on - strand, within AO353_01480 at 317.585 kb on - strand, within AO353_01480 at 317.682 kb on + strand, within AO353_01480 at 317.683 kb on - strand, within AO353_01480 at 317.782 kb on - strand, within AO353_01480 at 317.826 kb on + strand, within AO353_01480 at 317.826 kb on + strand, within AO353_01480 at 317.826 kb on + strand, within AO353_01480 at 317.826 kb on + strand, within AO353_01480 at 317.826 kb on + strand, within AO353_01480 at 317.826 kb on + strand, within AO353_01480 at 317.827 kb on - strand, within AO353_01480 at 317.827 kb on - strand, within AO353_01480 at 317.827 kb on - strand, within AO353_01480 at 317.827 kb on - strand, within AO353_01480 at 317.827 kb on - strand, within AO353_01480 at 317.827 kb on - strand, within AO353_01480 at 317.827 kb on - strand, within AO353_01480 at 317.827 kb on - strand, within AO353_01480 at 317.827 kb on - strand, within AO353_01480 at 317.827 kb on - strand, within AO353_01480 at 317.833 kb on + strand, within AO353_01480 at 317.833 kb on + strand, within AO353_01480 at 317.834 kb on - strand, within AO353_01480 at 317.834 kb on - strand, within AO353_01480 at 317.835 kb on + strand, within AO353_01480 at 317.835 kb on + strand, within AO353_01480 at 317.835 kb on + strand, within AO353_01480 at 317.835 kb on + strand, within AO353_01480 at 317.835 kb on + strand, within AO353_01480 at 317.835 kb on + strand, within AO353_01480 at 317.835 kb on + strand, within AO353_01480 at 317.836 kb on - strand, within AO353_01480 at 317.836 kb on - strand, within AO353_01480 at 317.836 kb on - strand, within AO353_01480 at 317.836 kb on - strand, within AO353_01480 at 317.836 kb on - strand, within AO353_01480 at 317.836 kb on - strand, within AO353_01480 at 317.836 kb on - strand, within AO353_01480 at 317.836 kb on - strand, within AO353_01480 at 317.851 kb on + strand, within AO353_01480 at 317.878 kb on + strand, within AO353_01480 at 317.895 kb on + strand, within AO353_01480 at 317.895 kb on + strand, within AO353_01480 at 317.896 kb on - strand, within AO353_01480 at 317.896 kb on - strand, within AO353_01480 at 317.947 kb on + strand at 317.977 kb on + strand at 317.977 kb on + strand at 318.016 kb on + strand at 318.017 kb on - strand at 318.017 kb on - strand at 318.282 kb on + strand, within AO353_01485 at 318.362 kb on + strand, within AO353_01485 at 318.363 kb on - strand, within AO353_01485 at 318.363 kb on - strand, within AO353_01485 at 318.363 kb on - strand, within AO353_01485 at 318.587 kb on + strand, within AO353_01485 at 318.587 kb on + strand, within AO353_01485 at 318.587 kb on + strand, within AO353_01485 at 318.588 kb on - strand, within AO353_01485 at 318.588 kb on - strand, within AO353_01485 at 318.588 kb on - strand, within AO353_01485 at 318.588 kb on - strand, within AO353_01485 at 318.588 kb on - strand, within AO353_01485 at 318.629 kb on + strand, within AO353_01485 at 318.629 kb on + strand, within AO353_01485 at 318.632 kb on + strand, within AO353_01485 at 318.652 kb on + strand, within AO353_01485 at 318.652 kb on + strand, within AO353_01485 at 318.652 kb on + strand, within AO353_01485 at 318.653 kb on - strand, within AO353_01485 at 318.653 kb on - strand, within AO353_01485 at 318.653 kb on - strand, within AO353_01485 at 318.653 kb on - strand, within AO353_01485 at 318.653 kb on - strand, within AO353_01485 at 318.653 kb on - strand, within AO353_01485 at 318.653 kb on - strand, within AO353_01485 at 318.653 kb on - strand, within AO353_01485 at 318.756 kb on + strand, within AO353_01485 at 318.756 kb on + strand, within AO353_01485 at 318.756 kb on + strand, within AO353_01485 at 318.756 kb on + strand, within AO353_01485 at 318.756 kb on + strand, within AO353_01485 at 318.757 kb on - strand, within AO353_01485 at 318.757 kb on - strand, within AO353_01485 at 318.905 kb on + strand at 318.905 kb on + strand at 318.906 kb on - strand at 318.906 kb on - strand at 318.906 kb on - strand at 318.954 kb on + strand at 318.955 kb on - strand at 318.955 kb on - strand at 318.980 kb on + strand at 318.980 kb on + strand at 318.980 kb on + strand at 318.980 kb on + strand at 318.984 kb on + strand at 318.984 kb on + strand at 318.984 kb on + strand at 318.984 kb on + strand at 318.984 kb on + strand at 318.984 kb on + strand at 318.985 kb on - strand at 318.985 kb on - strand at 318.985 kb on - strand at 318.985 kb on - strand at 318.985 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.25 vol% remove 316,275 + -0.9 316,275 + -2.1 316,276 - +1.4 316,276 - +0.9 316,276 - +0.1 316,368 + -0.0 316,368 + -1.7 316,374 + +0.2 316,374 + +0.9 316,375 - -1.5 316,375 - +0.2 316,389 - -0.0 316,455 + -0.4 316,456 - -0.3 316,456 - -0.9 316,509 + -0.0 316,509 + +0.5 316,509 + +0.1 316,510 - +1.1 316,510 - +0.7 316,510 - +0.9 316,510 - +1.2 316,513 + -0.7 316,513 + +0.3 316,513 + +0.2 316,513 + -1.0 316,513 + -0.4 316,513 + -0.4 316,513 + -0.8 316,513 + -1.1 316,513 + +0.1 316,513 + -1.5 316,513 + +0.3 316,513 + +1.2 316,513 + +2.9 316,513 + -0.7 316,513 + +1.1 316,514 - -1.1 316,514 - +0.3 316,514 - -1.2 316,514 - +0.5 316,514 - +1.2 316,514 - +0.3 316,514 - +0.5 316,514 - -0.5 316,514 - +0.5 316,514 - -0.6 316,565 + AO353_01475 0.13 -1.7 316,565 + AO353_01475 0.13 -2.3 316,622 + AO353_01475 0.28 +1.9 316,622 + AO353_01475 0.28 +1.9 316,889 + +0.6 316,933 - -0.4 316,933 - +0.6 317,117 + -1.5 317,117 + -0.5 317,131 + -1.2 317,132 - -1.7 317,158 + -0.7 317,158 + -1.7 317,159 - -0.1 317,159 - -0.9 317,159 - +0.5 317,159 - -1.2 317,159 - +0.3 317,159 - -1.3 317,161 + -0.2 317,161 + -0.5 317,162 - +0.0 317,162 - +0.3 317,162 - -1.7 317,162 - -2.7 317,162 - -0.7 317,162 - -1.5 317,238 + -1.1 317,238 + -2.6 317,238 + -0.9 317,238 + -0.1 317,239 - -0.3 317,239 - -0.1 317,239 - -0.5 317,286 + -1.1 317,286 + +0.9 317,286 + -1.5 317,286 + +0.1 317,286 + +1.9 317,286 + -0.7 317,286 + -2.5 317,286 + -2.8 317,286 + -0.1 317,286 + -1.1 317,286 + -0.5 317,287 - -0.9 317,287 - -0.1 317,287 - -1.7 317,287 - -1.1 317,287 - -2.6 317,294 + -0.7 317,294 + -2.7 317,295 - -1.1 317,304 - -2.3 317,304 - -1.9 317,317 + AO353_01480 0.10 +0.9 317,443 - AO353_01480 0.26 -1.3 317,443 - AO353_01480 0.26 -2.6 317,443 - AO353_01480 0.26 -1.9 317,461 - AO353_01480 0.29 -2.1 317,461 - AO353_01480 0.29 -1.1 317,461 - AO353_01480 0.29 -1.7 317,585 - AO353_01480 0.45 -0.7 317,682 + AO353_01480 0.57 -3.1 317,683 - AO353_01480 0.57 -1.3 317,782 - AO353_01480 0.70 -2.1 317,826 + AO353_01480 0.76 -1.5 317,826 + AO353_01480 0.76 -0.9 317,826 + AO353_01480 0.76 -2.7 317,826 + AO353_01480 0.76 -0.7 317,826 + AO353_01480 0.76 -0.1 317,826 + AO353_01480 0.76 -2.9 317,827 - AO353_01480 0.76 -1.7 317,827 - AO353_01480 0.76 -0.1 317,827 - AO353_01480 0.76 -0.7 317,827 - AO353_01480 0.76 -1.9 317,827 - AO353_01480 0.76 -2.5 317,827 - AO353_01480 0.76 -2.3 317,827 - AO353_01480 0.76 -1.5 317,827 - AO353_01480 0.76 -1.5 317,827 - AO353_01480 0.76 -1.9 317,827 - AO353_01480 0.76 -2.2 317,833 + AO353_01480 0.76 -0.7 317,833 + AO353_01480 0.76 -0.1 317,834 - AO353_01480 0.77 -1.5 317,834 - AO353_01480 0.77 -0.7 317,835 + AO353_01480 0.77 -0.1 317,835 + AO353_01480 0.77 -1.1 317,835 + AO353_01480 0.77 -1.1 317,835 + AO353_01480 0.77 -0.3 317,835 + AO353_01480 0.77 -4.0 317,835 + AO353_01480 0.77 -1.1 317,835 + AO353_01480 0.77 -2.3 317,836 - AO353_01480 0.77 -2.9 317,836 - AO353_01480 0.77 -1.9 317,836 - AO353_01480 0.77 -0.8 317,836 - AO353_01480 0.77 -0.8 317,836 - AO353_01480 0.77 -2.5 317,836 - AO353_01480 0.77 -1.9 317,836 - AO353_01480 0.77 -0.1 317,836 - AO353_01480 0.77 +0.2 317,851 + AO353_01480 0.79 -1.9 317,878 + AO353_01480 0.82 -1.1 317,895 + AO353_01480 0.84 -1.5 317,895 + AO353_01480 0.84 -0.7 317,896 - AO353_01480 0.84 -1.1 317,896 - AO353_01480 0.84 -1.1 317,947 + -3.2 317,977 + -0.3 317,977 + -0.7 318,016 + -0.7 318,017 - -0.7 318,017 - -2.1 318,282 + AO353_01485 0.29 -1.4 318,362 + AO353_01485 0.37 -1.4 318,363 - AO353_01485 0.38 -1.7 318,363 - AO353_01485 0.38 -2.7 318,363 - AO353_01485 0.38 +0.1 318,587 + AO353_01485 0.62 -0.9 318,587 + AO353_01485 0.62 -1.4 318,587 + AO353_01485 0.62 -0.7 318,588 - AO353_01485 0.62 -1.4 318,588 - AO353_01485 0.62 -0.4 318,588 - AO353_01485 0.62 -1.4 318,588 - AO353_01485 0.62 -1.9 318,588 - AO353_01485 0.62 -2.1 318,629 + AO353_01485 0.66 -2.1 318,629 + AO353_01485 0.66 -2.4 318,632 + AO353_01485 0.66 -1.7 318,652 + AO353_01485 0.68 -2.4 318,652 + AO353_01485 0.68 -0.7 318,652 + AO353_01485 0.68 -2.2 318,653 - AO353_01485 0.69 -0.6 318,653 - AO353_01485 0.69 -0.1 318,653 - AO353_01485 0.69 -1.4 318,653 - AO353_01485 0.69 -1.3 318,653 - AO353_01485 0.69 -1.8 318,653 - AO353_01485 0.69 -2.3 318,653 - AO353_01485 0.69 -1.7 318,653 - AO353_01485 0.69 -1.7 318,756 + AO353_01485 0.80 -1.8 318,756 + AO353_01485 0.80 -0.1 318,756 + AO353_01485 0.80 -2.1 318,756 + AO353_01485 0.80 -1.1 318,756 + AO353_01485 0.80 -2.4 318,757 - AO353_01485 0.80 -0.1 318,757 - AO353_01485 0.80 -1.5 318,905 + +1.9 318,905 + -2.4 318,906 - -1.7 318,906 - -1.9 318,906 - -1.3 318,954 + -0.3 318,955 - -0.3 318,955 - -0.7 318,980 + -0.3 318,980 + -1.9 318,980 + -2.3 318,980 + -0.9 318,984 + -1.3 318,984 + -0.9 318,984 + -2.9 318,984 + -1.4 318,984 + +0.1 318,984 + -0.6 318,985 - +1.9 318,985 - +1.5 318,985 - +0.1 318,985 - +1.2 318,985 - +1.1
Or see this region's nucleotide sequence