Experiment: Furfuryl Alcohol 0.25 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00245 and AO353_00250 are separated by 92 nucleotides AO353_00250 and AO353_00255 are separated by 29 nucleotides AO353_00255 and AO353_00260 overlap by 4 nucleotides AO353_00260 and AO353_00265 are separated by 72 nucleotides AO353_00265 and AO353_00270 are separated by 2 nucleotides
AO353_00245: AO353_00245 - XRE family transcriptional regulator, at 45,190 to 45,537
_00245
AO353_00250: AO353_00250 - hypothetical protein, at 45,630 to 45,830
_00250
AO353_00255: AO353_00255 - hypothetical protein, at 45,860 to 46,339
_00255
AO353_00260: AO353_00260 - hypothetical protein, at 46,336 to 46,701
_00260
AO353_00265: AO353_00265 - hypothetical protein, at 46,774 to 47,007
_00265
AO353_00270: AO353_00270 - toprim domain protein, at 47,010 to 49,703
_00270
Position (kb) 46
47 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 45.604 kb on - strand at 45.604 kb on - strand at 45.604 kb on - strand at 45.630 kb on - strand at 45.630 kb on - strand at 45.684 kb on - strand, within AO353_00250 at 45.684 kb on - strand, within AO353_00250 at 45.684 kb on - strand, within AO353_00250 at 45.684 kb on - strand, within AO353_00250 at 45.684 kb on - strand, within AO353_00250 at 45.684 kb on - strand, within AO353_00250 at 45.684 kb on - strand, within AO353_00250 at 45.684 kb on - strand, within AO353_00250 at 45.684 kb on - strand, within AO353_00250 at 45.854 kb on + strand at 45.854 kb on + strand at 45.854 kb on + strand at 45.854 kb on + strand at 45.854 kb on + strand at 45.854 kb on + strand at 45.854 kb on + strand at 45.855 kb on - strand at 45.855 kb on - strand at 45.855 kb on - strand at 45.855 kb on - strand at 45.855 kb on - strand at 45.855 kb on - strand at 45.855 kb on - strand at 45.855 kb on - strand at 45.855 kb on - strand at 45.855 kb on - strand at 45.876 kb on + strand at 45.876 kb on + strand at 45.987 kb on - strand at 46.071 kb on - strand, within AO353_00255 at 46.071 kb on - strand, within AO353_00255 at 46.071 kb on - strand, within AO353_00255 at 46.071 kb on - strand, within AO353_00255 at 46.071 kb on - strand, within AO353_00255 at 46.071 kb on - strand, within AO353_00255 at 46.071 kb on - strand, within AO353_00255 at 46.075 kb on - strand, within AO353_00255 at 46.075 kb on - strand, within AO353_00255 at 46.086 kb on - strand, within AO353_00255 at 46.086 kb on - strand, within AO353_00255 at 46.102 kb on - strand, within AO353_00255 at 46.355 kb on + strand at 46.363 kb on + strand at 46.364 kb on - strand at 46.364 kb on - strand at 46.439 kb on + strand, within AO353_00260 at 46.439 kb on + strand, within AO353_00260 at 46.440 kb on - strand, within AO353_00260 at 46.477 kb on + strand, within AO353_00260 at 46.603 kb on - strand, within AO353_00260 at 46.603 kb on - strand, within AO353_00260 at 46.646 kb on - strand, within AO353_00260 at 46.646 kb on - strand, within AO353_00260 at 46.700 kb on - strand at 46.714 kb on - strand at 46.714 kb on - strand at 46.714 kb on - strand at 46.714 kb on - strand at 46.714 kb on - strand at 46.880 kb on - strand, within AO353_00265 at 46.968 kb on - strand, within AO353_00265 at 46.968 kb on - strand, within AO353_00265 at 46.968 kb on - strand, within AO353_00265 at 46.968 kb on - strand, within AO353_00265 at 47.005 kb on + strand at 47.035 kb on + strand at 47.035 kb on + strand at 47.035 kb on + strand at 47.035 kb on + strand at 47.035 kb on + strand at 47.035 kb on + strand at 47.035 kb on + strand at 47.036 kb on - strand at 47.036 kb on - strand at 47.036 kb on - strand at 47.036 kb on - strand at 47.036 kb on - strand at 47.036 kb on - strand at 47.038 kb on + strand at 47.038 kb on + strand at 47.038 kb on + strand at 47.039 kb on - strand at 47.039 kb on - strand at 47.039 kb on - strand at 47.088 kb on + strand at 47.088 kb on + strand at 47.088 kb on + strand at 47.088 kb on + strand at 47.088 kb on + strand at 47.088 kb on + strand at 47.088 kb on + strand at 47.088 kb on + strand at 47.088 kb on + strand at 47.089 kb on - strand at 47.089 kb on - strand at 47.089 kb on - strand at 47.089 kb on - strand at 47.089 kb on - strand at 47.133 kb on + strand at 47.133 kb on + strand at 47.133 kb on + strand at 47.133 kb on + strand at 47.133 kb on + strand at 47.134 kb on - strand at 47.134 kb on - strand at 47.134 kb on - strand at 47.134 kb on - strand at 47.134 kb on - strand at 47.192 kb on + strand at 47.193 kb on - strand at 47.204 kb on - strand at 47.204 kb on - strand at 47.214 kb on + strand at 47.214 kb on + strand at 47.215 kb on - strand at 47.215 kb on - strand at 47.215 kb on - strand at 47.215 kb on - strand at 47.289 kb on + strand, within AO353_00270 at 47.290 kb on - strand, within AO353_00270 at 47.290 kb on - strand, within AO353_00270 at 47.290 kb on - strand, within AO353_00270 at 47.316 kb on - strand, within AO353_00270 at 47.316 kb on - strand, within AO353_00270 at 47.316 kb on - strand, within AO353_00270 at 47.339 kb on + strand, within AO353_00270 at 47.340 kb on - strand, within AO353_00270 at 47.340 kb on - strand, within AO353_00270 at 47.352 kb on + strand, within AO353_00270 at 47.352 kb on + strand, within AO353_00270 at 47.353 kb on - strand, within AO353_00270 at 47.353 kb on - strand, within AO353_00270 at 47.355 kb on + strand, within AO353_00270 at 47.355 kb on + strand, within AO353_00270 at 47.356 kb on - strand, within AO353_00270 at 47.356 kb on - strand, within AO353_00270 at 47.401 kb on + strand, within AO353_00270 at 47.487 kb on + strand, within AO353_00270 at 47.487 kb on + strand, within AO353_00270 at 47.487 kb on + strand, within AO353_00270 at 47.488 kb on - strand, within AO353_00270 at 47.488 kb on - strand, within AO353_00270 at 47.488 kb on - strand, within AO353_00270 at 47.488 kb on - strand, within AO353_00270 at 47.653 kb on + strand, within AO353_00270 at 47.654 kb on - strand, within AO353_00270
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.25 vol% remove 45,604 - +1.2 45,604 - +0.3 45,604 - -0.2 45,630 - -0.5 45,630 - +2.5 45,684 - AO353_00250 0.27 -0.1 45,684 - AO353_00250 0.27 -0.5 45,684 - AO353_00250 0.27 +0.9 45,684 - AO353_00250 0.27 +0.3 45,684 - AO353_00250 0.27 +0.8 45,684 - AO353_00250 0.27 +0.8 45,684 - AO353_00250 0.27 -0.5 45,684 - AO353_00250 0.27 +1.0 45,684 - AO353_00250 0.27 +1.8 45,854 + +0.5 45,854 + -0.5 45,854 + +0.8 45,854 + +0.5 45,854 + -1.2 45,854 + +0.8 45,854 + +0.0 45,855 - -1.3 45,855 - +0.2 45,855 - +0.8 45,855 - +0.0 45,855 - +0.4 45,855 - +0.2 45,855 - -1.0 45,855 - +1.2 45,855 - -0.4 45,855 - +0.6 45,876 + +1.5 45,876 + +3.8 45,987 - -1.5 46,071 - AO353_00255 0.44 -0.2 46,071 - AO353_00255 0.44 +0.5 46,071 - AO353_00255 0.44 -0.3 46,071 - AO353_00255 0.44 +2.8 46,071 - AO353_00255 0.44 +1.2 46,071 - AO353_00255 0.44 +0.5 46,071 - AO353_00255 0.44 +0.5 46,075 - AO353_00255 0.45 -0.2 46,075 - AO353_00255 0.45 +0.2 46,086 - AO353_00255 0.47 +1.8 46,086 - AO353_00255 0.47 -2.5 46,102 - AO353_00255 0.50 -0.6 46,355 + -0.2 46,363 + +0.5 46,364 - -0.2 46,364 - -1.5 46,439 + AO353_00260 0.28 +2.8 46,439 + AO353_00260 0.28 +0.2 46,440 - AO353_00260 0.28 -1.9 46,477 + AO353_00260 0.39 -0.8 46,603 - AO353_00260 0.73 -1.2 46,603 - AO353_00260 0.73 +3.1 46,646 - AO353_00260 0.85 -1.2 46,646 - AO353_00260 0.85 -0.5 46,700 - +1.0 46,714 - +0.6 46,714 - -2.4 46,714 - -0.4 46,714 - +0.1 46,714 - +1.0 46,880 - AO353_00265 0.45 -0.6 46,968 - AO353_00265 0.83 -1.3 46,968 - AO353_00265 0.83 +0.7 46,968 - AO353_00265 0.83 +1.8 46,968 - AO353_00265 0.83 +0.1 47,005 + -1.3 47,035 + +1.7 47,035 + -0.6 47,035 + -0.8 47,035 + +0.3 47,035 + -0.8 47,035 + +0.8 47,035 + +0.4 47,036 - +0.2 47,036 - +0.2 47,036 - +0.5 47,036 - +1.4 47,036 - -1.4 47,036 - -0.5 47,038 + -0.1 47,038 + -0.5 47,038 + +1.2 47,039 - +1.1 47,039 - -0.6 47,039 - -0.2 47,088 + +1.5 47,088 + -0.8 47,088 + +0.2 47,088 + -1.8 47,088 + -0.8 47,088 + -1.8 47,088 + -1.5 47,088 + +0.5 47,088 + +0.1 47,089 - +0.4 47,089 - +0.4 47,089 - +2.2 47,089 - +0.6 47,089 - -0.8 47,133 + +0.4 47,133 + -2.6 47,133 + -2.4 47,133 + -1.4 47,133 + +1.4 47,134 - -1.5 47,134 - +1.2 47,134 - -0.8 47,134 - +0.7 47,134 - -0.4 47,192 + -1.8 47,193 - -2.6 47,204 - +1.1 47,204 - +1.8 47,214 + -1.1 47,214 + -0.9 47,215 - -1.5 47,215 - +0.2 47,215 - -1.2 47,215 - -0.3 47,289 + AO353_00270 0.10 -2.0 47,290 - AO353_00270 0.10 -1.2 47,290 - AO353_00270 0.10 -0.2 47,290 - AO353_00270 0.10 -0.6 47,316 - AO353_00270 0.11 -0.5 47,316 - AO353_00270 0.11 -0.8 47,316 - AO353_00270 0.11 +0.1 47,339 + AO353_00270 0.12 +0.8 47,340 - AO353_00270 0.12 +0.6 47,340 - AO353_00270 0.12 +0.8 47,352 + AO353_00270 0.13 +0.8 47,352 + AO353_00270 0.13 +0.4 47,353 - AO353_00270 0.13 -0.0 47,353 - AO353_00270 0.13 +0.3 47,355 + AO353_00270 0.13 -1.0 47,355 + AO353_00270 0.13 -1.4 47,356 - AO353_00270 0.13 +1.1 47,356 - AO353_00270 0.13 -1.0 47,401 + AO353_00270 0.15 -1.1 47,487 + AO353_00270 0.18 -0.3 47,487 + AO353_00270 0.18 -0.2 47,487 + AO353_00270 0.18 -2.0 47,488 - AO353_00270 0.18 -0.8 47,488 - AO353_00270 0.18 -0.8 47,488 - AO353_00270 0.18 +1.8 47,488 - AO353_00270 0.18 -0.3 47,653 + AO353_00270 0.24 -1.2 47,654 - AO353_00270 0.24 -1.0
Or see this region's nucleotide sequence