Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3134 and DvMF_3135 are separated by 257 nucleotides DvMF_3135 and DvMF_3136 overlap by 4 nucleotides DvMF_3136 and DvMF_3137 are separated by 253 nucleotides
DvMF_3134: DvMF_3134 - protein of unknown function DUF21 (RefSeq), at 3,953,875 to 3,954,912
_3134
DvMF_3135: DvMF_3135 - histidinol-phosphate phosphatase family protein (RefSeq), at 3,955,170 to 3,955,871
_3135
DvMF_3136: DvMF_3136 - lipopolysaccharide heptosyltransferase II (RefSeq), at 3,955,868 to 3,956,902
_3136
DvMF_3137: DvMF_3137 - ABC transporter related (RefSeq), at 3,957,156 to 3,957,989
_3137
Position (kb)
3955
3956
3957 Strain fitness (log2 ratio)
-1
0
1 at 3954.913 kb on + strand at 3954.913 kb on + strand at 3954.913 kb on + strand at 3955.047 kb on - strand at 3955.118 kb on - strand at 3955.118 kb on - strand at 3957.020 kb on + strand at 3957.039 kb on - strand at 3957.171 kb on - strand at 3957.243 kb on - strand, within DvMF_3137 at 3957.308 kb on + strand, within DvMF_3137 at 3957.384 kb on + strand, within DvMF_3137 at 3957.384 kb on + strand, within DvMF_3137 at 3957.663 kb on + strand, within DvMF_3137 at 3957.837 kb on + strand, within DvMF_3137
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 3,954,913 + -0.6 3,954,913 + -0.4 3,954,913 + +0.6 3,955,047 - -1.0 3,955,118 - -0.4 3,955,118 - -0.7 3,957,020 + -0.7 3,957,039 - -1.1 3,957,171 - -1.1 3,957,243 - DvMF_3137 0.10 -1.2 3,957,308 + DvMF_3137 0.18 -0.7 3,957,384 + DvMF_3137 0.27 -1.2 3,957,384 + DvMF_3137 0.27 -0.4 3,957,663 + DvMF_3137 0.61 -1.5 3,957,837 + DvMF_3137 0.82 -0.8
Or see this region's nucleotide sequence