Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2001 and DvMF_2002 are separated by 63 nucleotides DvMF_2002 and DvMF_2003 are separated by 366 nucleotides
DvMF_2001: DvMF_2001 - protein of unknown function DUF112 transmembrane (RefSeq), at 2,480,360 to 2,481,904
_2001
DvMF_2002: DvMF_2002 - hypothetical protein (RefSeq), at 2,481,968 to 2,482,930
_2002
DvMF_2003: DvMF_2003 - Altronate dehydratase (RefSeq), at 2,483,297 to 2,484,460
_2003
Position (kb)
2481
2482
2483 Strain fitness (log2 ratio)
-1
0
1 at 2481.220 kb on - strand, within DvMF_2001 at 2481.256 kb on + strand, within DvMF_2001 at 2481.516 kb on + strand, within DvMF_2001 at 2481.576 kb on - strand, within DvMF_2001 at 2481.678 kb on + strand, within DvMF_2001 at 2481.914 kb on + strand at 2482.161 kb on + strand, within DvMF_2002 at 2482.198 kb on + strand, within DvMF_2002 at 2482.209 kb on - strand, within DvMF_2002 at 2482.371 kb on + strand, within DvMF_2002 at 2482.382 kb on - strand, within DvMF_2002 at 2482.440 kb on + strand, within DvMF_2002 at 2482.462 kb on - strand, within DvMF_2002 at 2482.472 kb on - strand, within DvMF_2002 at 2482.584 kb on - strand, within DvMF_2002 at 2482.666 kb on - strand, within DvMF_2002 at 2482.815 kb on + strand, within DvMF_2002 at 2482.870 kb on + strand at 2482.956 kb on + strand at 2482.964 kb on - strand at 2482.966 kb on + strand at 2483.172 kb on - strand at 2483.194 kb on - strand at 2483.271 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,481,220 - DvMF_2001 0.56 -0.4 2,481,256 + DvMF_2001 0.58 -0.4 2,481,516 + DvMF_2001 0.75 -0.0 2,481,576 - DvMF_2001 0.79 -0.0 2,481,678 + DvMF_2001 0.85 -0.1 2,481,914 + -0.3 2,482,161 + DvMF_2002 0.20 -0.7 2,482,198 + DvMF_2002 0.24 -1.2 2,482,209 - DvMF_2002 0.25 -0.6 2,482,371 + DvMF_2002 0.42 -0.5 2,482,382 - DvMF_2002 0.43 -0.5 2,482,440 + DvMF_2002 0.49 -0.6 2,482,462 - DvMF_2002 0.51 -0.3 2,482,472 - DvMF_2002 0.52 -0.4 2,482,584 - DvMF_2002 0.64 -0.9 2,482,666 - DvMF_2002 0.72 -0.8 2,482,815 + DvMF_2002 0.88 -0.6 2,482,870 + -1.3 2,482,956 + -0.6 2,482,964 - -0.0 2,482,966 + -0.8 2,483,172 - -0.6 2,483,194 - +0.1 2,483,271 - -0.7
Or see this region's nucleotide sequence