Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0013

Experiment: benzoic 0.29 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	benzoic 0.29 mg/ml
11,327	-		Synpcc7942_0011	0.69	+0.5
11,354	+		Synpcc7942_0011	0.75	+2.1
11,359	+		Synpcc7942_0011	0.76	+0.5
11,359	+		Synpcc7942_0011	0.76	-1.7
11,367	-		Synpcc7942_0011	0.77	-0.4
11,367	-		Synpcc7942_0011	0.77	-0.3
11,369	+		Synpcc7942_0011	0.78	-1.0
11,379	+		Synpcc7942_0011	0.80	+1.5
11,390	+		Synpcc7942_0011	0.82	-1.7
11,429	-				-0.7
11,434	+				-0.5
11,437	-				-0.2
11,442	-				+0.2
11,442	-				+0.2
11,447	-				+0.1
11,532	-				+0.2
11,554	-				+1.1
11,554	-				-0.3
11,554	-				-0.7
11,561	-				+1.9
11,593	-				+1.5
11,661	+				-0.7
12,074	+				-1.3
12,112	+				+0.5
12,120	-				+0.3
12,120	-				+1.9
12,127	+				+0.3
12,135	-				+0.1
12,177	+				+0.9
12,185	-				+1.5
12,191	+				+1.6
12,201	+				+1.5
12,201	+				+2.2
12,209	-				+2.0
12,209	-				-0.1
12,221	+				+1.3
12,353	+				+0.9
12,360	+				+0.2
12,360	+				+0.8
12,596	+		Synpcc7942_0013	0.39	+1.3
12,604	-		Synpcc7942_0013	0.40	-0.1
12,625	+		Synpcc7942_0013	0.43	-0.1
12,641	-		Synpcc7942_0013	0.45	+0.7
12,641	-		Synpcc7942_0013	0.45	+1.0
12,642	-		Synpcc7942_0013	0.45	+0.9
12,669	+		Synpcc7942_0013	0.49	+2.2
12,669	+		Synpcc7942_0013	0.49	+0.2
12,769	-		Synpcc7942_0013	0.63	+1.6
12,789	-		Synpcc7942_0013	0.66	+0.7
12,862	-		Synpcc7942_0013	0.76	+0.5
12,875	+		Synpcc7942_0013	0.78	-0.1
12,960	+				-2.4
12,960	+				-2.1
12,960	+				+0.7
12,960	+				+0.3
12,960	+				+0.3
12,968	-				+1.3
13,021	+				-1.7
13,021	+				+0.9
13,060	-				-1.7
13,082	-				-0.1
13,115	-		Synpcc7942_0014	0.14	-0.7
13,115	-		Synpcc7942_0014	0.14	+1.0
13,461	+				+0.2
13,461	+				-1.1
13,462	-				+0.5
13,469	-				+0.1
13,472	+				+2.1
13,481	-				-0.7
13,499	-				-1.4
13,503	+				+0.4
13,511	-				-0.7
13,511	-				-0.1
13,541	+				-1.1
13,547	-				+0.7
13,549	-				+1.4
13,553	-				-0.1
13,557	-				-1.1
13,570	-				+0.7
13,574	+				-0.5
13,574	+				-0.5
13,574	+				+1.5
13,574	+				+0.5
13,574	+				-1.7
13,574	+				-2.7
13,574	+				+0.7
13,574	+				+1.2
13,574	+				+0.6
13,574	+				+0.7
13,574	+				+0.3
13,579	+				-0.8
13,582	-				-1.5
13,582	-				+0.9
13,582	-				+0.4
13,582	-				+1.3
13,582	-				-0.3
13,582	-				-1.3
13,582	-				-0.1
13,587	-				+0.9
13,637	+				+0.6
13,645	-		Synpcc7942_0015	0.10	+0.9
13,679	-		Synpcc7942_0015	0.15	-0.1
13,735	-		Synpcc7942_0015	0.24	+0.4
13,749	+		Synpcc7942_0015	0.26	-1.4
13,749	+		Synpcc7942_0015	0.26	+1.5
13,776	-		Synpcc7942_0015	0.30	+0.2
13,776	-		Synpcc7942_0015	0.30	+0.8
13,776	-				+0.5
13,778	+		Synpcc7942_0015	0.30	-0.5
13,781	-		Synpcc7942_0015	0.30	+1.2
13,783	+		Synpcc7942_0015	0.31	-1.1
13,786	-		Synpcc7942_0015	0.31	+0.0
13,786	-		Synpcc7942_0015	0.31	+0.9
13,786	-		Synpcc7942_0015	0.31	-0.1
13,791	-		Synpcc7942_0015	0.32	+0.4
13,802	-		Synpcc7942_0015	0.33	-1.4
13,824	+		Synpcc7942_0015	0.37	+1.5
13,829	+		Synpcc7942_0015	0.38	+0.2
13,829	+		Synpcc7942_0015	0.38	-1.8
13,832	-		Synpcc7942_0015	0.38	-0.8
13,834	+		Synpcc7942_0015	0.38	-0.1
13,834	+		Synpcc7942_0015	0.38	+0.2
13,834	+		Synpcc7942_0015	0.38	+0.5
13,842	-		Synpcc7942_0015	0.39	-1.6
13,842	-		Synpcc7942_0015	0.39	+0.9
13,842	-		Synpcc7942_0015	0.39	-0.1
13,842	-		Synpcc7942_0015	0.39	-0.3
13,846	+		Synpcc7942_0015	0.40	+0.2
13,848	+		Synpcc7942_0015	0.40	-1.1
13,856	+		Synpcc7942_0015	0.42	+2.7
13,856	+		Synpcc7942_0015	0.42	+0.1
13,864	-		Synpcc7942_0015	0.43	+0.3
13,864	-		Synpcc7942_0015	0.43	-0.1
13,869	+		Synpcc7942_0015	0.43	+1.1
13,870	-		Synpcc7942_0015	0.44	+0.1
13,870	-		Synpcc7942_0015	0.44	+1.7
13,879	+		Synpcc7942_0015	0.45	+0.7
13,907	+		Synpcc7942_0015	0.49	+0.5
13,910	-		Synpcc7942_0015	0.50	-0.7
13,915	-		Synpcc7942_0015	0.50	+0.5
13,967	+		Synpcc7942_0015	0.58	-0.8
13,983	+		Synpcc7942_0015	0.60	-1.7
13,991	-		Synpcc7942_0015	0.62	+1.8
14,016	+		Synpcc7942_0015	0.65	-0.5
14,022	+		Synpcc7942_0015	0.66	+0.0