Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_981

Experiment: D-Cycloserine 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.1 mg/ml
1,107,582	+		Pf1N1B4_979	0.37	+0.1
1,107,582	+		Pf1N1B4_979	0.37	-1.9
1,107,582	+		Pf1N1B4_979	0.37	+0.7
1,107,582	+		Pf1N1B4_979	0.37	+0.1
1,107,583	-		Pf1N1B4_979	0.37	+0.4
1,107,583	-		Pf1N1B4_979	0.37	-1.5
1,107,583	-		Pf1N1B4_979	0.37	-0.3
1,107,655	+		Pf1N1B4_979	0.43	-0.9
1,107,656	-		Pf1N1B4_979	0.43	-0.9
1,107,681	+		Pf1N1B4_979	0.45	-1.8
1,107,682	-		Pf1N1B4_979	0.46	+0.7
1,107,703	+		Pf1N1B4_979	0.47	-1.7
1,107,704	-		Pf1N1B4_979	0.47	-0.4
1,107,704	-		Pf1N1B4_979	0.47	+1.3
1,107,704	-		Pf1N1B4_979	0.47	+0.1
1,107,780	+		Pf1N1B4_979	0.54	+0.1
1,107,852	+		Pf1N1B4_979	0.61	+0.1
1,107,894	+		Pf1N1B4_979	0.64	-1.2
1,107,894	+		Pf1N1B4_979	0.64	-0.9
1,107,894	+		Pf1N1B4_979	0.64	+0.7
1,107,894	+		Pf1N1B4_979	0.64	+0.6
1,107,894	+		Pf1N1B4_979	0.64	-0.9
1,107,894	+		Pf1N1B4_979	0.64	-1.1
1,107,894	+		Pf1N1B4_979	0.64	-0.7
1,107,894	+		Pf1N1B4_979	0.64	+0.9
1,107,895	-		Pf1N1B4_979	0.64	+1.7
1,107,895	-		Pf1N1B4_979	0.64	+1.1
1,107,895	-		Pf1N1B4_979	0.64	-0.9
1,107,895	-		Pf1N1B4_979	0.64	+0.1
1,107,895	-				+0.1
1,107,895	-				+0.1
1,107,895	-		Pf1N1B4_979	0.64	+0.3
1,107,895	-				-0.9
1,107,895	-		Pf1N1B4_979	0.64	-0.9
1,107,895	-		Pf1N1B4_979	0.64	+0.1
1,107,897	+		Pf1N1B4_979	0.65	-1.8
1,107,897	+		Pf1N1B4_979	0.65	-0.5
1,107,897	+		Pf1N1B4_979	0.65	-0.9
1,107,897	+		Pf1N1B4_979	0.65	-2.5
1,107,897	+		Pf1N1B4_979	0.65	-0.9
1,107,897	+		Pf1N1B4_979	0.65	+1.1
1,107,897	+		Pf1N1B4_979	0.65	-1.5
1,107,897	+		Pf1N1B4_979	0.65	-1.9
1,107,897	+		Pf1N1B4_979	0.65	+1.1
1,107,897	+		Pf1N1B4_979	0.65	-1.9
1,107,897	+				-1.5
1,107,897	+		Pf1N1B4_979	0.65	+1.1
1,107,897	+		Pf1N1B4_979	0.65	+0.4
1,107,897	+		Pf1N1B4_979	0.65	-1.7
1,107,897	+		Pf1N1B4_979	0.65	-1.5
1,107,898	-		Pf1N1B4_979	0.65	-0.9
1,107,898	-		Pf1N1B4_979	0.65	+1.5
1,107,898	-		Pf1N1B4_979	0.65	-0.9
1,107,898	-		Pf1N1B4_979	0.65	-2.5
1,107,898	-		Pf1N1B4_979	0.65	+0.1
1,107,898	-		Pf1N1B4_979	0.65	-1.5
1,107,898	-		Pf1N1B4_979	0.65	+1.1
1,107,898	-				+1.1
1,107,898	-		Pf1N1B4_979	0.65	+0.4
1,107,898	-		Pf1N1B4_979	0.65	-0.9
1,107,898	-		Pf1N1B4_979	0.65	+1.4
1,108,008	+		Pf1N1B4_979	0.74	-0.6
1,108,008	+		Pf1N1B4_979	0.74	-1.5
1,108,009	-		Pf1N1B4_979	0.75	+0.8
1,108,009	-		Pf1N1B4_979	0.75	-0.3
1,108,328	+				-0.8
1,108,328	+				-0.2
1,108,328	+				+1.3
1,108,328	+				-1.5
1,108,329	-				-1.2
1,108,330	+				-0.9
1,108,379	+		Pf1N1B4_980	0.28	+2.7
1,108,403	+		Pf1N1B4_980	0.47	-0.1
1,108,403	+		Pf1N1B4_980	0.47	+0.5
1,108,404	-		Pf1N1B4_980	0.47	+1.7
1,108,404	-		Pf1N1B4_980	0.47	-0.2
1,108,404	-		Pf1N1B4_980	0.47	+0.4
1,108,404	-		Pf1N1B4_980	0.47	+0.7
1,108,460	+				-1.5
1,108,460	+				-0.9
1,108,460	+				+0.8
1,108,460	+				-0.5
1,108,460	+				+0.1
1,108,461	-				+0.7
1,108,461	-				-0.3
1,108,461	-				-1.7
1,108,471	+				-1.5
1,108,499	-				-0.6
1,108,499	-				-2.5
1,108,611	-		Pf1N1B4_981	0.10	-1.5
1,108,793	+		Pf1N1B4_981	0.33	+0.1
1,108,794	-		Pf1N1B4_981	0.34	-1.5
1,108,794	-		Pf1N1B4_981	0.34	+0.4
1,108,794	-		Pf1N1B4_981	0.34	-0.9
1,108,794	-		Pf1N1B4_981	0.34	+0.7
1,108,874	+		Pf1N1B4_981	0.44	-0.9
1,108,874	+		Pf1N1B4_981	0.44	+0.1
1,108,875	-		Pf1N1B4_981	0.44	+1.1
1,108,875	-		Pf1N1B4_981	0.44	-2.1
1,108,875	-		Pf1N1B4_981	0.44	-1.5
1,108,962	-		Pf1N1B4_981	0.55	-1.2
1,109,054	+		Pf1N1B4_981	0.67	-0.9
1,109,054	+		Pf1N1B4_981	0.67	-1.5
1,109,249	+				-0.6
1,109,267	-				-3.1
1,109,309	+				-0.9
1,109,309	+				+1.4
1,109,539	-				-0.5
1,109,721	-				+0.1
1,109,789	-				-1.2
1,109,943	-				-0.1
1,110,015	-				-1.5
1,110,047	-				-0.9
1,110,125	-				+0.1
1,110,145	+				+0.1
1,110,145	+				-2.2
1,110,146	-				+2.1
1,110,160	-				-0.7
1,110,172	+				-0.4
1,110,242	+				+0.3