Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_74

Experiment: D-Cycloserine 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.1 mg/ml
77,179	+		Pf1N1B4_73	0.36	-0.2
77,179	+		Pf1N1B4_73	0.36	-1.8
77,179	+		Pf1N1B4_73	0.36	+0.3
77,180	-		Pf1N1B4_73	0.36	-2.2
77,180	-		Pf1N1B4_73	0.36	-0.2
77,245	+		Pf1N1B4_73	0.41	+0.4
77,246	-		Pf1N1B4_73	0.41	-0.6
77,293	+		Pf1N1B4_73	0.45	-0.5
77,407	+		Pf1N1B4_73	0.55	+0.3
77,408	-		Pf1N1B4_73	0.55	+0.4
77,408	-		Pf1N1B4_73	0.55	-0.2
77,408	-		Pf1N1B4_73	0.55	+0.8
77,440	+		Pf1N1B4_73	0.58	-0.8
77,452	+		Pf1N1B4_73	0.59	+1.9
77,620	+				-0.2
77,623	+		Pf1N1B4_73	0.73	-0.2
77,623	+		Pf1N1B4_73	0.73	+0.5
77,623	+		Pf1N1B4_73	0.73	+1.3
77,623	+		Pf1N1B4_73	0.73	+0.8
77,623	+		Pf1N1B4_73	0.73	+1.8
77,623	+		Pf1N1B4_73	0.73	-1.2
77,624	-		Pf1N1B4_73	0.73	+0.6
77,624	-		Pf1N1B4_73	0.73	-0.9
77,624	-		Pf1N1B4_73	0.73	-1.2
77,624	-		Pf1N1B4_73	0.73	+1.8
77,665	+		Pf1N1B4_73	0.77	+0.2
77,665	+		Pf1N1B4_73	0.77	-1.8
77,665	+		Pf1N1B4_73	0.77	-0.2
77,665	+		Pf1N1B4_73	0.77	+0.3
77,665	+		Pf1N1B4_73	0.77	-1.2
77,665	+		Pf1N1B4_73	0.77	-0.2
77,666	-		Pf1N1B4_73	0.77	-0.2
77,666	-		Pf1N1B4_73	0.77	+1.0
77,666	-		Pf1N1B4_73	0.77	+0.2
77,666	-		Pf1N1B4_73	0.77	+0.8
77,672	-		Pf1N1B4_73	0.78	+0.3
77,688	+		Pf1N1B4_73	0.79	-0.8
77,688	+		Pf1N1B4_73	0.79	-0.6
77,688	+		Pf1N1B4_73	0.79	-2.2
77,689	-		Pf1N1B4_73	0.79	+1.8
77,689	-		Pf1N1B4_73	0.79	-0.1
77,819	-				+0.1
77,876	-				-2.2
77,912	+				-0.2
77,912	+				+0.3
77,912	+				+0.5
77,912	+				-0.8
77,913	-				+0.3
77,913	-				+0.8
78,032	+				-1.6
78,033	-				-1.2
78,033	-				-0.2
78,033	-				+0.3
78,040	-				+0.1
78,060	-				-1.2
78,121	+				-0.7
78,122	-				+1.8
78,139	-				+1.1
78,139	-				+0.1
78,167	+				-1.2
78,168	-				-0.2
78,168	-				+0.1
78,205	+		Pf1N1B4_74	0.15	-2.4
78,206	-		Pf1N1B4_74	0.15	-0.8
78,206	-		Pf1N1B4_74	0.15	-0.8
78,304	+		Pf1N1B4_74	0.52	+0.2
78,305	-		Pf1N1B4_74	0.53	-0.7
78,419	+				+0.6
78,419	+				+1.1
78,419	+				-0.2
78,419	+				-1.2
78,420	-				-0.7
78,420	-				+0.3
78,420	-				-0.2
78,420	-				-0.2
78,420	-				-0.6
78,685	+		Pf1N1B4_75	0.63	+0.8
78,685	+		Pf1N1B4_75	0.63	-0.7
78,686	-		Pf1N1B4_75	0.63	-0.5
78,813	-				-2.2
78,844	+				+1.8
78,888	+				+1.8
79,002	+				+0.8
79,003	-				+1.1
79,181	+				+0.3
79,181	+				-0.5
79,182	-				-1.7
79,182	-				-1.2
79,182	-				-1.2
79,182	-				-2.6
79,200	+				-0.2
79,201	-				-0.2
79,236	-				+0.8
79,276	+				+0.5
79,276	+				+1.0
79,277	-				+0.3
79,277	-				+0.0
79,324	-				-0.2