Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5322

Experiment: D-Cycloserine 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.1 mg/ml
70,722	-		Pf1N1B4_5321	0.25	-1.1
70,722	-		Pf1N1B4_5321	0.25	-0.1
70,722	-		Pf1N1B4_5321	0.25	-0.9
70,824	-		Pf1N1B4_5321	0.55	-1.4
71,058	+				-2.7
71,058	+				-1.2
71,058	+				-0.1
71,058	+				-0.7
71,058	+				+1.5
71,058	+				+0.3
71,059	-				-0.1
71,059	-				-1.1
71,059	-				+0.2
71,092	+				-0.7
71,092	+				-0.7
71,093	-				-0.1
71,114	+				-0.4
71,114	+				-1.1
71,115	-				-1.1
71,131	-				+0.2
71,139	-				+0.6
71,229	+				-1.7
71,335	+				-0.6
71,335	+				+0.7
71,336	-				-0.1
71,356	+				-0.1
71,358	+				-1.9
71,358	+				-2.1
71,358	+				+1.2
71,358	+				+0.7
71,358	+				-0.7
71,358	+				+0.9
71,358	+				-1.7
71,359	-				+0.9
71,359	-				+0.9
71,359	-				-0.7
71,359	-				-2.1
71,359	-				-0.1
71,359	-				+1.2
71,433	+				-0.1
71,437	+				+0.7
71,437	+				-0.1
71,437	+				-2.4
71,481	-				+0.2
71,499	+				-1.1
71,669	+				+0.2
71,669	+				-1.4
71,669	+				+1.2
71,669	+				+2.5
71,670	-				-1.2
71,670	-				-0.1
71,715	-				+0.5
71,752	+		Pf1N1B4_5322	0.20	-0.7
71,753	-		Pf1N1B4_5322	0.20	-2.7
71,763	-		Pf1N1B4_5322	0.26	-1.7
71,880	+		Pf1N1B4_5322	0.89	+1.9
71,880	+		Pf1N1B4_5322	0.89	-1.0
71,898	+				+1.2
71,899	-				+0.5
71,913	+				+0.9
71,917	+				+0.8
71,917	+				-2.1
71,918	-				-1.7
71,926	+				+1.7
71,926	+				-0.1
71,927	-				+0.9
71,975	+				-0.8
72,165	-		Pf1N1B4_5323	0.18	-0.5
72,268	+		Pf1N1B4_5323	0.28	-0.7
72,269	-		Pf1N1B4_5323	0.28	-0.7
72,411	-		Pf1N1B4_5323	0.43	-1.1
72,495	+		Pf1N1B4_5323	0.52	-1.2
72,496	-		Pf1N1B4_5323	0.52	-0.3
72,496	-		Pf1N1B4_5323	0.52	-0.8
72,496	-		Pf1N1B4_5323	0.52	-0.3
72,515	-		Pf1N1B4_5323	0.54	-0.1
72,529	+		Pf1N1B4_5323	0.56	-0.1
72,529	+		Pf1N1B4_5323	0.56	-0.2
72,530	-		Pf1N1B4_5323	0.56	-2.4
72,531	+		Pf1N1B4_5323	0.56	+0.6
72,531	+		Pf1N1B4_5323	0.56	-1.1
72,531	+		Pf1N1B4_5323	0.56	-1.4
72,532	-		Pf1N1B4_5323	0.56	-1.1
72,575	-		Pf1N1B4_5323	0.60	+2.1
72,668	+		Pf1N1B4_5323	0.70	-0.9
72,788	+		Pf1N1B4_5323	0.83	-1.5
72,865	+				-2.7
72,866	-				-0.1