Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5259

Experiment: D-Cycloserine 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.1 mg/ml
16,037	+		Pf1N1B4_5257	0.10	-0.6
16,037	+		Pf1N1B4_5257	0.10	-2.4
16,037	+				+1.5
16,037	+		Pf1N1B4_5257	0.10	-1.7
16,038	-		Pf1N1B4_5257	0.10	-1.2
16,038	-		Pf1N1B4_5257	0.10	-0.4
16,038	-		Pf1N1B4_5257	0.10	+0.4
16,038	-		Pf1N1B4_5257	0.10	-3.4
16,213	+		Pf1N1B4_5257	0.69	-0.4
16,213	+		Pf1N1B4_5257	0.69	-0.9
16,213	+		Pf1N1B4_5257	0.69	+0.2
16,213	+		Pf1N1B4_5257	0.69	-0.8
16,214	-				-1.7
16,214	-		Pf1N1B4_5257	0.69	+0.5
16,268	+		Pf1N1B4_5257	0.87	-0.1
16,268	+		Pf1N1B4_5257	0.87	-0.7
16,280	+				+0.5
16,280	+				-0.1
16,280	+				-0.4
16,384	+				-0.3
16,384	+				-0.3
16,384	+				-0.7
16,409	+		Pf1N1B4_5258	0.12	+0.5
16,434	+		Pf1N1B4_5258	0.26	-0.5
16,435	-		Pf1N1B4_5258	0.26	+1.7
16,435	-		Pf1N1B4_5258	0.26	-2.1
16,435	-		Pf1N1B4_5258	0.26	+0.3
16,435	-		Pf1N1B4_5258	0.26	-0.5
16,435	-		Pf1N1B4_5258	0.26	-0.1
16,435	-		Pf1N1B4_5258	0.26	-1.4
16,509	+		Pf1N1B4_5258	0.65	-0.3
16,510	-		Pf1N1B4_5258	0.65	+0.9
16,510	-		Pf1N1B4_5258	0.65	-0.1
16,563	-				+0.5
16,575	-				-1.1
16,623	+				-2.9
16,623	+				-0.3
16,627	+				+0.5
16,627	+				-1.1
16,627	+				-0.9
16,627	+				-1.1
16,627	+				-2.1
16,627	+				+1.9
16,627	+				-0.6
16,628	-				-1.1
16,628	-				-0.1
16,648	+				-0.4
16,648	+				+1.5
16,676	+				-0.1
16,676	+				-1.0
16,676	+				-1.7
16,747	+				-0.2
16,761	+				-0.7
16,762	-				-1.1
16,809	-				-0.2
16,918	+				+0.9
16,918	+				-0.1
16,918	+				+1.4
16,918	+				+1.2
16,918	+				+0.7
16,919	-				-1.7
16,940	+		Pf1N1B4_5259	0.14	+0.5
16,940	+		Pf1N1B4_5259	0.14	-1.1
16,941	-		Pf1N1B4_5259	0.14	-0.1
16,941	-		Pf1N1B4_5259	0.14	-1.1
16,941	-		Pf1N1B4_5259	0.14	-0.8
17,150	+		Pf1N1B4_5259	0.72	-1.9
17,150	+		Pf1N1B4_5259	0.72	-0.8
17,150	+		Pf1N1B4_5259	0.72	-0.1
17,150	+		Pf1N1B4_5259	0.72	-1.8
17,150	+		Pf1N1B4_5259	0.72	-1.7
17,150	+		Pf1N1B4_5259	0.72	-3.1
17,150	+		Pf1N1B4_5259	0.72	-1.7
17,151	-		Pf1N1B4_5259	0.72	-0.8
17,151	-		Pf1N1B4_5259	0.72	-2.1
17,151	-		Pf1N1B4_5259	0.72	-1.7
17,151	-		Pf1N1B4_5259	0.72	-0.1
17,163	+		Pf1N1B4_5259	0.76	-0.5
17,164	-		Pf1N1B4_5259	0.76	+0.5
17,244	+				-0.1
17,244	+				-0.1
17,245	-				-1.1
17,268	+				+1.2
17,439	-				-0.3
17,459	+				+0.5
17,586	+				-1.5
17,595	-				+0.5
17,620	-				+0.3
17,620	-				+0.4
17,684	+				-1.4
17,684	+				-0.1
17,685	-				-0.1
17,700	-				+0.5
17,718	-				-0.7
17,718	-				-0.1
17,750	+				+0.7
17,751	-				+0.7
17,861	-				-1.9
18,136	+				+1.5
18,192	+				+0.6
18,192	+				-0.1
18,193	-				+1.5
18,244	+				-0.8
18,248	-				-0.6