Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4532
Experiment: D-Cycloserine 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | D-Cycloserine 0.1 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 4,996,986 | - | -0.1 | |||
| 4,997,210 | + | +1.5 | |||
| 4,997,370 | - | -0.6 | |||
| 4,997,408 | + | -0.6 | |||
| 4,997,453 | - | +1.0 | |||
| 4,997,740 | + | -1.6 | |||
| 4,997,920 | - | -0.6 | |||
| 4,998,200 | - | +0.1 | |||
| 4,998,205 | - | Pf1N1B4_4532 | 0.11 | -2.0 | |
| 4,998,362 | + | Pf1N1B4_4532 | 0.17 | -0.6 | |
| 4,998,363 | - | Pf1N1B4_4532 | 0.17 | -0.6 | |
| 4,998,674 | + | Pf1N1B4_4532 | 0.29 | -2.4 | |
| 4,999,290 | - | Pf1N1B4_4532 | 0.53 | +0.9 | |
| 5,000,138 | - | Pf1N1B4_4532 | 0.87 | -0.6 | |
| 5,000,318 | + | -2.6 | |||
| 5,000,319 | - | -0.6 | |||
| 5,000,378 | + | -2.2 | |||
| 5,000,379 | - | +1.6 | |||
| 5,000,867 | - | Pf1N1B4_4533 | 0.38 | -0.7 | |
| 5,001,107 | - | Pf1N1B4_4533 | 0.62 | -0.2 | |
| 5,001,107 | - | Pf1N1B4_4533 | 0.62 | -2.6 |
Or see this region's nucleotide sequence