Experiment: D-Cycloserine 0.1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
Pf1N1B4_438 - hypothetical protein, at 518,297 to 519,328
_438
Position (kb) 518
519
520 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 517.585 kb on + strand at 518.005 kb on + strand at 518.061 kb on - strand at 518.061 kb on - strand at 518.266 kb on - strand at 518.311 kb on + strand at 518.484 kb on + strand, within Pf1N1B4_438 at 518.593 kb on - strand, within Pf1N1B4_438 at 518.637 kb on - strand at 518.664 kb on + strand, within Pf1N1B4_438 at 518.665 kb on - strand, within Pf1N1B4_438 at 518.826 kb on - strand at 518.826 kb on - strand, within Pf1N1B4_438 at 518.839 kb on - strand at 518.993 kb on + strand, within Pf1N1B4_438 at 518.994 kb on - strand, within Pf1N1B4_438 at 518.994 kb on - strand, within Pf1N1B4_438 at 519.024 kb on - strand, within Pf1N1B4_438 at 519.077 kb on - strand, within Pf1N1B4_438 at 519.114 kb on - strand, within Pf1N1B4_438 at 519.114 kb on - strand, within Pf1N1B4_438 at 519.212 kb on + strand, within Pf1N1B4_438 at 519.213 kb on - strand, within Pf1N1B4_438 at 519.318 kb on - strand at 519.318 kb on - strand at 519.318 kb on - strand at 519.324 kb on + strand at 519.325 kb on - strand at 519.325 kb on - strand at 519.325 kb on - strand at 519.325 kb on - strand at 519.325 kb on - strand at 519.330 kb on + strand at 519.331 kb on - strand at 519.352 kb on - strand at 519.403 kb on - strand at 519.419 kb on + strand at 519.420 kb on - strand at 519.420 kb on - strand at 519.420 kb on - strand at 519.464 kb on + strand at 519.465 kb on - strand at 519.497 kb on - strand at 519.497 kb on - strand at 519.688 kb on - strand at 520.080 kb on + strand at 520.252 kb on + strand at 520.288 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.1 mg/ml remove 517,585 + -0.2 518,005 + -1.2 518,061 - +0.6 518,061 - -0.2 518,266 - -1.5 518,311 + -1.2 518,484 + Pf1N1B4_438 0.18 -0.2 518,593 - Pf1N1B4_438 0.29 -2.2 518,637 - -1.8 518,664 + Pf1N1B4_438 0.36 +1.4 518,665 - Pf1N1B4_438 0.36 -1.2 518,826 - -0.2 518,826 - Pf1N1B4_438 0.51 -1.2 518,839 - +2.2 518,993 + Pf1N1B4_438 0.67 -0.6 518,994 - Pf1N1B4_438 0.68 -2.0 518,994 - Pf1N1B4_438 0.68 -1.4 519,024 - Pf1N1B4_438 0.70 -1.2 519,077 - Pf1N1B4_438 0.76 -2.8 519,114 - Pf1N1B4_438 0.79 +2.2 519,114 - Pf1N1B4_438 0.79 +0.3 519,212 + Pf1N1B4_438 0.89 -0.5 519,213 - Pf1N1B4_438 0.89 -2.2 519,318 - -1.2 519,318 - -0.2 519,318 - +0.4 519,324 + -0.2 519,325 - -0.2 519,325 - +1.4 519,325 - +0.8 519,325 - +1.4 519,325 - -0.2 519,330 + -0.2 519,331 - +0.7 519,352 - +1.4 519,403 - +0.0 519,419 + -1.2 519,420 - -1.5 519,420 - +0.1 519,420 - +0.6 519,464 + -0.2 519,465 - -0.2 519,497 - -3.3 519,497 - -0.8 519,688 - +0.9 520,080 + +0.8 520,252 + -1.8 520,288 - -0.4
Or see this region's nucleotide sequence