Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4140

Experiment: D-Cycloserine 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.1 mg/ml
4,582,095	-		Pf1N1B4_4139	0.86	+1.4
4,582,144	+				-0.6
4,582,144	+				+1.2
4,582,144	+				-1.4
4,582,144	+				-2.4
4,582,144	+				-1.0
4,582,144	+				-2.0
4,582,144	+				-1.8
4,582,144	+				+0.6
4,582,144	+				-0.3
4,582,144	+				-1.4
4,582,144	+				-1.4
4,582,144	+				-3.0
4,582,145	-				-0.4
4,582,145	-				-2.2
4,582,145	-				+0.6
4,582,145	-				-0.2
4,582,145	-				-0.4
4,582,145	-				-1.4
4,582,145	-				-2.8
4,582,145	-				-0.6
4,582,145	-				+1.9
4,582,145	-				-1.5
4,582,145	-				-2.0
4,582,145	-				-0.1
4,582,145	-				-1.2
4,582,145	-				-3.0
4,582,148	+				-1.0
4,582,148	+				-0.6
4,582,148	+				-0.1
4,582,148	+				-1.8
4,582,148	+				-2.2
4,582,148	+				-0.1
4,582,148	+				-1.4
4,582,148	+				+1.2
4,582,148	+				-1.0
4,582,148	+				-0.4
4,582,149	-				+2.6
4,582,149	-				+1.2
4,582,149	-				-0.5
4,582,149	-				-2.0
4,582,149	-				+0.2
4,582,149	-				-3.0
4,582,149	-				-2.0
4,582,290	+				+0.2
4,582,290	+				-0.4
4,582,290	+				+1.6
4,582,290	+				-0.4
4,582,290	+				+1.9
4,582,290	+				-1.4
4,582,290	+				-0.6
4,582,291	-				-0.4
4,582,291	-				+0.6
4,582,291	-				-0.7
4,582,291	-				+0.2
4,582,479	-				+0.9
4,582,479	-				+0.7
4,582,517	-				-2.2
4,582,517	-				-1.4
4,582,517	-				-0.0
4,582,698	+				-0.4
4,582,699	-				-1.0
4,582,699	-				-1.7
4,582,699	-				-1.8
4,582,699	-				+1.6
4,582,705	-				-0.4
4,582,705	-				-2.0
4,582,707	-				+2.2
4,582,810	-				+0.6
4,582,834	-				-0.1
4,582,863	-				-0.4
4,582,940	-				+0.0
4,582,941	+				-0.4
4,582,942	-				-2.0
4,583,001	+				-0.3
4,583,002	-				+1.0
4,583,031	-				-2.4
4,583,031	-				-0.4
4,583,031	-				-0.4
4,583,031	-				-0.8
4,583,036	-				-0.1
4,583,036	-				-0.4
4,583,064	-				-1.4
4,583,110	-		Pf1N1B4_4140	0.12	-1.7
4,583,110	-		Pf1N1B4_4140	0.12	-0.2
4,583,110	-		Pf1N1B4_4140	0.12	-0.4
4,583,125	+		Pf1N1B4_4140	0.23	-3.0
4,583,126	-		Pf1N1B4_4140	0.24	+0.6
4,583,196	+		Pf1N1B4_4140	0.77	-1.2
4,583,253	+				-2.0
4,583,287	+				+0.3
4,583,330	+				+0.9
4,583,330	+				-0.4
4,583,331	-				-1.8
4,583,331	-				+0.4
4,583,331	-				-1.3
4,583,366	+				+0.6
4,583,366	+				-2.0
4,583,367	-				+0.6
4,583,367	-				+0.4
4,583,403	+				-0.2
4,583,404	-				-1.2
4,583,404	-				-1.4
4,583,404	-				+0.2
4,583,405	-				-1.4
4,583,479	+				-0.8
4,583,670	+		Pf1N1B4_4141	0.14	-0.8
4,583,670	+		Pf1N1B4_4141	0.14	-1.0
4,583,671	-				-1.4
4,583,671	-		Pf1N1B4_4141	0.14	-2.0
4,583,683	+		Pf1N1B4_4141	0.14	+0.2
4,583,705	+		Pf1N1B4_4141	0.15	-1.4
4,583,705	+		Pf1N1B4_4141	0.15	-1.8
4,583,706	-		Pf1N1B4_4141	0.15	-0.4
4,583,706	-		Pf1N1B4_4141	0.15	-0.6
4,583,706	-				+2.4
4,583,706	-		Pf1N1B4_4141	0.15	+0.7
4,583,706	-		Pf1N1B4_4141	0.15	-0.4
4,583,750	+		Pf1N1B4_4141	0.17	-0.0
4,583,750	+		Pf1N1B4_4141	0.17	+1.7
4,583,751	-		Pf1N1B4_4141	0.17	-2.0
4,583,781	+		Pf1N1B4_4141	0.18	+0.3
4,583,781	+		Pf1N1B4_4141	0.18	-2.4
4,583,845	-		Pf1N1B4_4141	0.21	+0.2
4,583,868	+		Pf1N1B4_4141	0.22	+0.2
4,583,868	+		Pf1N1B4_4141	0.22	-1.0
4,583,868	+		Pf1N1B4_4141	0.22	-0.8
4,583,868	+		Pf1N1B4_4141	0.22	-0.4
4,583,868	+		Pf1N1B4_4141	0.22	+0.1
4,583,869	-				-1.0
4,583,869	-		Pf1N1B4_4141	0.22	-0.4
4,583,869	-		Pf1N1B4_4141	0.22	-1.4
4,583,869	-		Pf1N1B4_4141	0.22	-0.4
4,583,870	+		Pf1N1B4_4141	0.22	+0.3
4,583,877	-		Pf1N1B4_4141	0.22	+0.3
4,584,008	+		Pf1N1B4_4141	0.27	+0.2
4,584,009	-		Pf1N1B4_4141	0.27	-2.2
4,584,009	-		Pf1N1B4_4141	0.27	+0.3
4,584,009	-		Pf1N1B4_4141	0.27	-0.4
4,584,021	+		Pf1N1B4_4141	0.28	-0.4