Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3785

Experiment: D-Cycloserine 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.1 mg/ml
4,194,101	+		Pf1N1B4_3784	0.58	-0.3
4,194,102	-		Pf1N1B4_3784	0.58	-1.3
4,194,102	-		Pf1N1B4_3784	0.58	-1.2
4,194,102	-		Pf1N1B4_3784	0.58	-1.1
4,194,102	-		Pf1N1B4_3784	0.58	-1.3
4,194,102	-		Pf1N1B4_3784	0.58	+0.7
4,194,114	+		Pf1N1B4_3784	0.58	-0.8
4,194,207	+		Pf1N1B4_3784	0.63	+1.3
4,194,208	-		Pf1N1B4_3784	0.64	-2.8
4,194,239	+		Pf1N1B4_3784	0.65	-0.7
4,194,239	+		Pf1N1B4_3784	0.65	+0.3
4,194,239	+		Pf1N1B4_3784	0.65	-0.3
4,194,387	+		Pf1N1B4_3784	0.73	+0.0
4,194,388	-		Pf1N1B4_3784	0.73	+1.9
4,194,388	-		Pf1N1B4_3784	0.73	+0.1
4,194,463	-		Pf1N1B4_3784	0.77	+0.1
4,194,546	+		Pf1N1B4_3784	0.82	-1.8
4,194,546	+		Pf1N1B4_3784	0.82	+0.2
4,194,547	-		Pf1N1B4_3784	0.82	-0.7
4,194,669	+		Pf1N1B4_3784	0.89	-0.3
4,194,670	-		Pf1N1B4_3784	0.89	+0.2
4,194,792	+				+0.3
4,194,819	+				+0.2
4,194,819	+				-0.3
4,194,819	+				-1.8
4,194,819	+				-0.5
4,194,820	-				-3.1
4,194,820	-				-0.8
4,194,889	-				+1.1
4,194,940	-				+0.3
4,195,100	+		Pf1N1B4_3785	0.24	-1.5
4,195,100	+		Pf1N1B4_3785	0.24	-1.3
4,195,101	-		Pf1N1B4_3785	0.24	-0.3
4,195,590	-				-0.8
4,195,590	-				+0.5
4,195,590	-				+0.4
4,195,590	-				-1.0
4,195,590	-				-3.1
4,195,595	+				+1.7
4,195,595	+				-0.6
4,195,595	+				-1.6
4,195,595	+				+0.0
4,195,595	+				-0.8
4,195,595	+				-1.3
4,195,596	-				+0.2
4,195,596	-				+0.2
4,195,596	-				-0.8
4,195,596	-				+2.1
4,195,596	-				+0.7
4,195,596	-				+0.3
4,195,596	-				+0.7
4,195,596	-				-1.1
4,195,788	+		Pf1N1B4_3786	0.27	-1.3
4,195,788	+		Pf1N1B4_3786	0.27	+1.1
4,195,788	+		Pf1N1B4_3786	0.27	+2.5
4,195,789	-		Pf1N1B4_3786	0.27	-2.3
4,195,872	+				-0.3
4,195,872	+		Pf1N1B4_3786	0.42	-1.3
4,195,872	+		Pf1N1B4_3786	0.42	+1.3
4,195,872	+		Pf1N1B4_3786	0.42	-0.3
4,195,873	-		Pf1N1B4_3786	0.43	-0.7
4,195,873	-		Pf1N1B4_3786	0.43	+1.3
4,195,873	-		Pf1N1B4_3786	0.43	-0.3
4,195,873	-		Pf1N1B4_3786	0.43	-1.8
4,195,873	-		Pf1N1B4_3786	0.43	+0.1
4,195,873	-		Pf1N1B4_3786	0.43	-2.3
4,195,873	-		Pf1N1B4_3786	0.43	-0.4
4,196,022	+		Pf1N1B4_3786	0.71	-0.9
4,196,185	+				-1.8
4,196,193	+				-1.8
4,196,194	-				-1.3
4,196,228	+				+2.3
4,196,228	+				-0.8
4,196,228	+				+0.2
4,196,228	+				-1.1
4,196,228	+				-0.3
4,196,228	+				+0.7
4,196,228	+				-2.3
4,196,229	-				-0.1
4,196,238	+				-0.8
4,196,335	+		Pf1N1B4_3787	0.39	+0.7
4,196,335	+		Pf1N1B4_3787	0.39	-0.4
4,196,336	-		Pf1N1B4_3787	0.39	+1.7
4,196,336	-		Pf1N1B4_3787	0.39	-2.1
4,196,336	-		Pf1N1B4_3787	0.39	+0.1
4,196,336	-		Pf1N1B4_3787	0.39	+1.5
4,196,377	-		Pf1N1B4_3787	0.60	-0.3
4,196,377	-		Pf1N1B4_3787	0.60	-0.7