Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2331

Experiment: D-Cycloserine 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.1 mg/ml
2,649,007	+				-0.1
2,649,007	+				+0.6
2,649,058	+				-0.9
2,649,069	+				-0.2
2,649,069	+				+0.0
2,649,070	-				-1.7
2,649,070	-				-0.3
2,649,070	-				+0.3
2,649,105	+				-0.4
2,649,105	+				-0.7
2,649,106	-				-2.3
2,649,107	+				-0.3
2,649,107	+				-1.7
2,649,107	+				-1.4
2,649,107	+				+1.1
2,649,107	+				+0.9
2,649,107	+				-0.7
2,649,107	+				-0.4
2,649,107	+				-0.8
2,649,107	+				+0.9
2,649,107	+				+1.3
2,649,107	+				-0.4
2,649,107	+				+0.0
2,649,108	-				-1.7
2,649,108	-				-1.3
2,649,108	-				+0.3
2,649,108	-				+0.3
2,649,108	-				+0.1
2,649,108	-				+0.9
2,649,108	-				-0.4
2,649,108	-				+0.3
2,649,108	-				+1.9
2,649,108	-				-0.4
2,649,108	-				-0.7
2,649,108	-				+0.7
2,649,108	-				-0.3
2,649,108	-				-1.3
2,649,108	-				-1.3
2,649,108	-				-0.6
2,649,276	+		Pf1N1B4_2329	0.35	+1.1
2,649,277	-		Pf1N1B4_2329	0.36	-2.3
2,649,277	-		Pf1N1B4_2329	0.36	+1.6
2,649,277	-		Pf1N1B4_2329	0.36	+0.3
2,649,277	-		Pf1N1B4_2329	0.36	-0.1
2,649,277	-		Pf1N1B4_2329	0.36	-2.5
2,649,277	-		Pf1N1B4_2329	0.36	+0.7
2,649,277	-		Pf1N1B4_2329	0.36	-0.7
2,649,290	+		Pf1N1B4_2329	0.39	-1.4
2,649,310	+		Pf1N1B4_2329	0.45	-1.3
2,649,311	-		Pf1N1B4_2329	0.45	-1.8
2,649,311	-		Pf1N1B4_2329	0.45	-0.0
2,649,402	+		Pf1N1B4_2329	0.69	+0.7
2,649,402	+		Pf1N1B4_2329	0.69	-0.7
2,649,402	+		Pf1N1B4_2329	0.69	+0.3
2,649,784	+		Pf1N1B4_2330	0.89	-1.3
2,649,852	+				+0.9
2,649,881	+				+0.3
2,649,911	+				-1.3
2,649,911	+				-0.7
2,649,911	+				-0.2
2,649,912	-				+1.3
2,649,915	+				-0.5
2,649,915	+				-0.1
2,649,915	+				+2.7
2,649,915	+				-0.7
2,649,916	-				-1.7
2,649,934	+				+1.3
2,649,934	+				-1.3
2,649,935	-				-0.7
2,649,939	-				+0.3
2,650,083	+		Pf1N1B4_2331	0.27	-0.7
2,650,084	-		Pf1N1B4_2331	0.27	-0.8
2,650,084	-		Pf1N1B4_2331	0.27	-0.3
2,650,098	-		Pf1N1B4_2331	0.29	-0.7
2,650,284	+		Pf1N1B4_2331	0.52	-1.2
2,650,284	+		Pf1N1B4_2331	0.52	-0.3
2,650,284	+		Pf1N1B4_2331	0.52	-0.3
2,650,284	+		Pf1N1B4_2331	0.52	-1.7
2,650,284	+		Pf1N1B4_2331	0.52	-0.7
2,650,285	-		Pf1N1B4_2331	0.53	-1.3
2,650,285	-		Pf1N1B4_2331	0.53	+0.3
2,650,591	-				-1.7
2,650,620	+				-0.7
2,650,620	+				-1.3
2,650,620	+				-0.4
2,650,659	+				-1.0
2,650,659	+				+1.1
2,650,659	+				-1.3
2,650,659	+				-1.3
2,650,659	+				-1.2
2,650,659	+				-0.1
2,650,660	-				-1.7
2,650,660	-				+1.0
2,650,813	+		Pf1N1B4_2332	0.20	+0.7
2,651,029	-		Pf1N1B4_2332	0.49	-1.7
2,651,235	+		Pf1N1B4_2332	0.78	-0.1
2,651,235	+		Pf1N1B4_2332	0.78	-1.3
2,651,235	+		Pf1N1B4_2332	0.78	-1.0
2,651,394	+				-0.3
2,651,394	+				-1.3
2,651,504	+				+0.1
2,651,504	+				+0.9
2,651,505	-				+0.3
2,651,505	-				+0.0
2,651,577	+		Pf1N1B4_2333	0.20	-0.3
2,651,577	+		Pf1N1B4_2333	0.20	-0.7
2,651,577	+		Pf1N1B4_2333	0.20	+0.9
2,651,577	+		Pf1N1B4_2333	0.20	+0.2
2,651,577	+		Pf1N1B4_2333	0.20	-0.7
2,651,577	+		Pf1N1B4_2333	0.20	+0.7
2,651,577	+		Pf1N1B4_2333	0.20	+2.3
2,651,578	-		Pf1N1B4_2333	0.20	-2.8
2,651,578	-		Pf1N1B4_2333	0.20	+0.3
2,651,578	-		Pf1N1B4_2333	0.20	-1.7
2,651,578	-		Pf1N1B4_2333	0.20	-0.5
2,651,578	-		Pf1N1B4_2333	0.20	-0.8
2,651,578	-		Pf1N1B4_2333	0.20	-1.4
2,651,578	-				-0.7
2,651,578	-		Pf1N1B4_2333	0.20	+0.2
2,651,578	-		Pf1N1B4_2333	0.20	-0.1
2,651,578	-		Pf1N1B4_2333	0.20	-0.9
2,651,578	-		Pf1N1B4_2333	0.20	-1.0
2,651,578	-		Pf1N1B4_2333	0.20	+0.3
2,651,578	-		Pf1N1B4_2333	0.20	-0.4
2,651,622	+		Pf1N1B4_2333	0.34	-0.7
2,651,622	+		Pf1N1B4_2333	0.34	-2.5
2,651,622	+		Pf1N1B4_2333	0.34	+0.3
2,651,623	-		Pf1N1B4_2333	0.34	-0.3
2,651,623	-		Pf1N1B4_2333	0.34	-1.7
2,651,623	-		Pf1N1B4_2333	0.34	+0.7
2,651,623	-		Pf1N1B4_2333	0.34	+0.3
2,651,623	-		Pf1N1B4_2333	0.34	-1.7
2,651,623	-		Pf1N1B4_2333	0.34	-0.5
2,651,623	-		Pf1N1B4_2333	0.34	-0.8
2,651,623	-		Pf1N1B4_2333	0.34	-0.7
2,651,623	-		Pf1N1B4_2333	0.34	-1.3
2,651,623	-		Pf1N1B4_2333	0.34	+0.3
2,651,623	-		Pf1N1B4_2333	0.34	-0.5