Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2210

Experiment: D-Cycloserine 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.1 mg/ml
2,523,810	+		Pf1N1B4_2209	0.62	-4.1
2,523,810	+		Pf1N1B4_2209	0.62	-3.3
2,523,810	+		Pf1N1B4_2209	0.62	-3.2
2,523,811	-		Pf1N1B4_2209	0.62	-1.6
2,523,855	+		Pf1N1B4_2209	0.65	-2.8
2,523,856	-		Pf1N1B4_2209	0.65	-2.9
2,523,856	-		Pf1N1B4_2209	0.65	-2.3
2,523,867	+		Pf1N1B4_2209	0.66	-3.5
2,523,867	+		Pf1N1B4_2209	0.66	-2.6
2,523,867	+		Pf1N1B4_2209	0.66	-2.2
2,523,867	+		Pf1N1B4_2209	0.66	-2.3
2,523,867	+		Pf1N1B4_2209	0.66	-1.9
2,523,867	+		Pf1N1B4_2209	0.66	-2.9
2,523,867	+		Pf1N1B4_2209	0.66	-2.2
2,523,868	-		Pf1N1B4_2209	0.66	-3.8
2,524,008	+		Pf1N1B4_2209	0.75	-1.6
2,524,009	-		Pf1N1B4_2209	0.75	-2.8
2,524,009	-		Pf1N1B4_2209	0.75	-2.3
2,524,151	-		Pf1N1B4_2209	0.85	-2.8
2,524,512	+				+1.4
2,524,548	+				-0.7
2,524,548	+				-0.1
2,524,549	-				-0.8
2,524,656	+				+0.9
2,524,656	+				+1.0
2,524,656	+				+0.2
2,524,657	-				-1.6
2,524,657	-				-1.9
2,524,657	-				+1.2
2,524,657	-				+0.4
2,525,131	+		Pf1N1B4_2210	0.73	-2.2
2,525,132	-		Pf1N1B4_2210	0.73	-0.7
2,525,132	-				-1.2
2,525,293	+				-0.3
2,525,293	+				+0.4
2,525,293	+				-0.0
2,525,293	+				-1.6
2,525,293	+				-0.0
2,525,293	+				-1.8
2,525,294	-				-1.6
2,525,294	-				+0.4
2,525,294	-				+0.0
2,525,294	-				+0.1
2,525,294	-				-0.8
2,525,294	-				-1.9
2,525,294	-				-1.2
2,525,297	+				-1.1
2,525,297	+				+1.4
2,525,297	+				-1.6
2,525,298	-				-0.0
2,525,298	-				-1.2
2,525,298	-				-0.2
2,525,298	-				+0.4
2,525,298	-				+2.7
2,525,298	-				+0.8
2,525,298	-				+0.4
2,525,298	-				-0.4
2,525,298	-				-0.6
2,525,298	-				-0.4
2,525,315	+				+1.1
2,525,315	+				+1.4
2,525,315	+				+0.4
2,525,316	-				-1.6
2,525,316	-				-0.5
2,525,316	-				-0.6
2,525,316	-				-2.2
2,525,369	+				+1.1
2,525,385	-		Pf1N1B4_2211	0.11	-1.2
2,525,405	+		Pf1N1B4_2211	0.14	-1.2
2,525,405	+		Pf1N1B4_2211	0.14	+0.8
2,525,567	+		Pf1N1B4_2211	0.39	-0.0
2,525,568	-		Pf1N1B4_2211	0.39	-0.2
2,525,568	-		Pf1N1B4_2211	0.39	+0.6
2,525,666	+		Pf1N1B4_2211	0.54	-0.2
2,525,667	-		Pf1N1B4_2211	0.54	+0.8
2,525,667	-		Pf1N1B4_2211	0.54	-0.6
2,525,798	+		Pf1N1B4_2211	0.74	-0.0
2,525,798	+		Pf1N1B4_2211	0.74	+0.4
2,525,798	+		Pf1N1B4_2211	0.74	+1.0
2,525,798	+		Pf1N1B4_2211	0.74	+0.8
2,525,798	+		Pf1N1B4_2211	0.74	+1.2
2,525,799	-		Pf1N1B4_2211	0.75	-1.2
2,525,799	-		Pf1N1B4_2211	0.75	+0.5
2,525,799	-		Pf1N1B4_2211	0.75	+0.4
2,525,799	-		Pf1N1B4_2211	0.75	+1.4
2,525,880	+		Pf1N1B4_2211	0.87	-0.6
2,525,982	+				+0.1
2,525,982	+				+0.8
2,525,982	+				+0.4
2,525,982	+				-1.2
2,525,982	+				-1.2
2,525,982	+				+2.0
2,525,982	+				+0.4
2,525,982	+				-0.6
2,525,982	+				-0.6
2,525,982	+				+0.4
2,525,982	+				-1.8
2,525,982	+				+0.4
2,525,982	+				-0.8
2,525,982	+				-1.2
2,525,982	+				+1.0
2,525,982	+				-0.1
2,525,982	+				+1.1
2,525,982	+				-0.4
2,525,983	-				+0.2
2,525,983	-				-1.3
2,525,983	-				-0.0
2,525,983	-				-0.1
2,525,983	-				+0.1
2,525,983	-				-1.4
2,525,983	-				+0.2
2,525,983	-				+0.4
2,525,983	-				-0.3
2,525,983	-				+0.8
2,525,986	+				-0.6
2,525,987	-				-0.6
2,525,987	-				-0.6
2,525,987	-				-1.6
2,525,987	-				-0.7
2,525,987	-				-0.2
2,525,987	-				+0.4
2,526,040	+				+0.4
2,526,040	+		Pf1N1B4_2212	0.12	-0.0
2,526,040	+		Pf1N1B4_2212	0.12	-1.0
2,526,040	+		Pf1N1B4_2212	0.12	-1.2
2,526,040	+		Pf1N1B4_2212	0.12	+0.7
2,526,041	-		Pf1N1B4_2212	0.12	-0.9
2,526,041	-		Pf1N1B4_2212	0.12	+0.7
2,526,041	-		Pf1N1B4_2212	0.12	+0.2
2,526,041	-		Pf1N1B4_2212	0.12	-1.3
2,526,041	-		Pf1N1B4_2212	0.12	+0.4
2,526,041	-		Pf1N1B4_2212	0.12	-1.2
2,526,061	+		Pf1N1B4_2212	0.15	+0.1
2,526,061	+		Pf1N1B4_2212	0.15	+0.2
2,526,061	+		Pf1N1B4_2212	0.15	+0.8
2,526,061	+		Pf1N1B4_2212	0.15	-0.0
2,526,061	+		Pf1N1B4_2212	0.15	-1.2
2,526,061	+		Pf1N1B4_2212	0.15	+0.1
2,526,062	-		Pf1N1B4_2212	0.15	-1.2
2,526,062	-		Pf1N1B4_2212	0.15	+1.4
2,526,062	-		Pf1N1B4_2212	0.15	-0.4
2,526,084	-		Pf1N1B4_2212	0.18	+0.4
2,526,084	-		Pf1N1B4_2212	0.18	-1.2
2,526,323	-		Pf1N1B4_2212	0.54	-0.2
2,526,323	-		Pf1N1B4_2212	0.54	+0.4