Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2196

Experiment: D-Cycloserine 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.1 mg/ml
2,507,335	+				+1.7
2,507,335	+				+1.0
2,507,335	+				+0.4
2,507,335	+				-0.6
2,507,336	-				-0.8
2,507,568	+		Pf1N1B4_2195	0.15	+1.1
2,507,568	+		Pf1N1B4_2195	0.15	-1.3
2,507,569	-				+0.4
2,507,592	-		Pf1N1B4_2195	0.19	+0.4
2,507,828	+		Pf1N1B4_2195	0.60	+0.4
2,507,925	+		Pf1N1B4_2195	0.76	-1.0
2,507,926	-		Pf1N1B4_2195	0.76	-0.8
2,508,060	+				+0.8
2,508,060	+				+1.4
2,508,060	+				+0.9
2,508,060	+				+0.4
2,508,214	+				-0.2
2,508,278	+				-0.3
2,508,278	+				-0.4
2,508,278	+				-0.9
2,508,278	+				+1.4
2,508,279	-				-0.6
2,508,283	+				-0.9
2,508,283	+				+1.0
2,508,284	-				-0.6
2,508,284	-				-0.7
2,508,284	-				+0.7
2,508,284	-				+0.4
2,508,284	-				-0.6
2,508,534	+		Pf1N1B4_2196	0.34	-1.8
2,508,534	+		Pf1N1B4_2196	0.34	+0.4
2,508,534	+		Pf1N1B4_2196	0.34	-0.9
2,508,534	+		Pf1N1B4_2196	0.34	+0.4
2,508,534	+		Pf1N1B4_2196	0.34	-0.6
2,508,534	+		Pf1N1B4_2196	0.34	-0.6
2,508,534	+		Pf1N1B4_2196	0.34	-1.6
2,508,535	-		Pf1N1B4_2196	0.34	-1.9
2,508,561	+		Pf1N1B4_2196	0.38	-0.2
2,508,562	-		Pf1N1B4_2196	0.39	-0.2
2,508,571	-		Pf1N1B4_2196	0.40	+0.4
2,508,608	+		Pf1N1B4_2196	0.46	-1.9
2,508,608	+		Pf1N1B4_2196	0.46	+0.1
2,508,608	+		Pf1N1B4_2196	0.46	-1.0
2,508,948	+				-1.7
2,508,948	+				-0.6
2,509,106	+				+0.1
2,509,106	+				-1.9
2,509,107	-				+2.4
2,509,250	+		Pf1N1B4_2197	0.19	-0.6
2,509,251	-		Pf1N1B4_2197	0.20	+0.4
2,509,251	-		Pf1N1B4_2197	0.20	-1.3
2,509,251	-		Pf1N1B4_2197	0.20	+1.7
2,509,350	+		Pf1N1B4_2197	0.33	+2.4
2,509,350	+		Pf1N1B4_2197	0.33	-0.3
2,509,351	-		Pf1N1B4_2197	0.33	+1.7
2,509,351	-		Pf1N1B4_2197	0.33	+0.4
2,509,351	-		Pf1N1B4_2197	0.33	+0.3
2,509,351	-		Pf1N1B4_2197	0.33	-1.2
2,509,410	+		Pf1N1B4_2197	0.41	+0.1
2,509,411	-		Pf1N1B4_2197	0.42	-1.2
2,509,411	-		Pf1N1B4_2197	0.42	+0.4
2,509,411	-		Pf1N1B4_2197	0.42	+0.1
2,509,482	+		Pf1N1B4_2197	0.51	-1.3
2,509,482	+		Pf1N1B4_2197	0.51	-1.6
2,509,483	-		Pf1N1B4_2197	0.52	-1.6
2,509,483	-		Pf1N1B4_2197	0.52	-0.6
2,509,530	+		Pf1N1B4_2197	0.58	+0.3
2,509,530	+		Pf1N1B4_2197	0.58	-1.9
2,509,530	+		Pf1N1B4_2197	0.58	-0.3
2,509,530	+		Pf1N1B4_2197	0.58	-1.2
2,509,531	-		Pf1N1B4_2197	0.58	+1.4
2,509,531	-		Pf1N1B4_2197	0.58	+0.4
2,509,531	-		Pf1N1B4_2197	0.58	-0.7
2,509,531	-				+0.4
2,509,531	-		Pf1N1B4_2197	0.58	-1.4
2,509,531	-		Pf1N1B4_2197	0.58	-0.0
2,509,531	-		Pf1N1B4_2197	0.58	-0.3
2,509,531	-				-0.6
2,509,557	+		Pf1N1B4_2197	0.62	+1.4
2,509,558	-		Pf1N1B4_2197	0.62	+0.4
2,509,558	-		Pf1N1B4_2197	0.62	-1.6
2,509,627	+		Pf1N1B4_2197	0.71	-1.8
2,509,627	+		Pf1N1B4_2197	0.71	+0.4
2,509,628	-				+0.4
2,509,628	-		Pf1N1B4_2197	0.71	-0.2
2,509,650	+		Pf1N1B4_2197	0.75	+2.0
2,509,650	+				-1.2
2,509,651	-		Pf1N1B4_2197	0.75	-1.6
2,509,651	-		Pf1N1B4_2197	0.75	-0.2
2,509,651	-		Pf1N1B4_2197	0.75	-0.9
2,509,677	+		Pf1N1B4_2197	0.78	-0.0
2,509,701	+		Pf1N1B4_2197	0.82	-1.6
2,509,702	-		Pf1N1B4_2197	0.82	+0.8
2,509,704	+		Pf1N1B4_2197	0.82	+2.4
2,509,704	+		Pf1N1B4_2197	0.82	-0.2
2,509,704	+		Pf1N1B4_2197	0.82	-0.6
2,509,705	-		Pf1N1B4_2197	0.82	+0.1
2,509,746	+				-1.2
2,509,746	+		Pf1N1B4_2197	0.88	-0.3
2,509,746	+		Pf1N1B4_2197	0.88	+1.4
2,509,746	+		Pf1N1B4_2197	0.88	-0.3
2,509,746	+				+2.4
2,509,746	+		Pf1N1B4_2197	0.88	-0.2
2,509,746	+		Pf1N1B4_2197	0.88	-0.2
2,509,746	+		Pf1N1B4_2197	0.88	-0.6
2,509,746	+				+0.4
2,509,746	+		Pf1N1B4_2197	0.88	-0.2
2,509,746	+		Pf1N1B4_2197	0.88	-0.6
2,509,746	+		Pf1N1B4_2197	0.88	+0.4
2,509,746	+				+0.4
2,509,746	+		Pf1N1B4_2197	0.88	+0.4
2,509,746	+		Pf1N1B4_2197	0.88	+0.4
2,509,746	+		Pf1N1B4_2197	0.88	+0.1
2,509,746	+		Pf1N1B4_2197	0.88	+0.1
2,509,746	+		Pf1N1B4_2197	0.88	-0.6
2,509,746	+		Pf1N1B4_2197	0.88	-2.2
2,509,746	+		Pf1N1B4_2197	0.88	+0.7
2,509,746	+		Pf1N1B4_2197	0.88	-1.6
2,509,747	-		Pf1N1B4_2197	0.88	-2.9
2,509,747	-		Pf1N1B4_2197	0.88	-0.2
2,509,747	-		Pf1N1B4_2197	0.88	-1.2
2,509,747	-		Pf1N1B4_2197	0.88	+0.1
2,509,747	-		Pf1N1B4_2197	0.88	-0.4
2,509,747	-		Pf1N1B4_2197	0.88	+2.0
2,509,747	-		Pf1N1B4_2197	0.88	-0.8
2,509,747	-		Pf1N1B4_2197	0.88	-0.1
2,509,767	+				-0.3
2,509,944	+		Pf1N1B4_2198	0.15	-1.2
2,509,944	+		Pf1N1B4_2198	0.15	+0.2
2,509,944	+		Pf1N1B4_2198	0.15	-1.6
2,509,945	-		Pf1N1B4_2198	0.15	+0.7