Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1971

Experiment: D-Cycloserine 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.1 mg/ml
2,252,300	+		Pf1N1B4_1970	0.18	+0.6
2,252,313	+		Pf1N1B4_1970	0.20	-0.1
2,252,314	-		Pf1N1B4_1970	0.20	-0.5
2,252,407	+		Pf1N1B4_1970	0.28	-0.5
2,252,407	+		Pf1N1B4_1970	0.28	-1.9
2,252,408	-		Pf1N1B4_1970	0.28	-0.5
2,252,408	-		Pf1N1B4_1970	0.28	-0.9
2,252,481	+		Pf1N1B4_1970	0.34	+0.5
2,252,481	+		Pf1N1B4_1970	0.34	+1.1
2,252,482	-		Pf1N1B4_1970	0.34	-0.1
2,252,486	+		Pf1N1B4_1970	0.35	+0.0
2,252,487	-		Pf1N1B4_1970	0.35	-1.9
2,252,541	+		Pf1N1B4_1970	0.39	-1.5
2,252,571	+		Pf1N1B4_1970	0.42	-0.1
2,252,571	+		Pf1N1B4_1970	0.42	+0.2
2,252,572	-		Pf1N1B4_1970	0.42	+2.3
2,252,572	-		Pf1N1B4_1970	0.42	+0.5
2,252,572	-		Pf1N1B4_1970	0.42	+0.0
2,252,572	-		Pf1N1B4_1970	0.42	+1.2
2,252,572	-		Pf1N1B4_1970	0.42	-1.5
2,252,575	+		Pf1N1B4_1970	0.42	+0.8
2,252,575	+		Pf1N1B4_1970	0.42	-0.1
2,252,575	+		Pf1N1B4_1970	0.42	-1.0
2,252,575	+		Pf1N1B4_1970	0.42	+2.5
2,252,575	+		Pf1N1B4_1970	0.42	-0.3
2,252,575	+		Pf1N1B4_1970	0.42	-0.1
2,252,575	+		Pf1N1B4_1970	0.42	+1.0
2,252,576	-		Pf1N1B4_1970	0.42	-1.9
2,252,576	-		Pf1N1B4_1970	0.42	+0.5
2,252,576	-		Pf1N1B4_1970	0.42	+0.9
2,252,576	-		Pf1N1B4_1970	0.42	-1.1
2,252,576	-		Pf1N1B4_1970	0.42	-0.1
2,252,576	-		Pf1N1B4_1970	0.42	+0.9
2,252,576	-		Pf1N1B4_1970	0.42	-0.1
2,252,610	+		Pf1N1B4_1970	0.45	-0.8
2,252,610	+		Pf1N1B4_1970	0.45	+0.4
2,252,610	+		Pf1N1B4_1970	0.45	-0.5
2,252,611	-				-1.5
2,252,650	+		Pf1N1B4_1970	0.49	-0.3
2,252,650	+		Pf1N1B4_1970	0.49	-2.2
2,252,651	-		Pf1N1B4_1970	0.49	-0.7
2,252,653	+		Pf1N1B4_1970	0.49	+1.0
2,252,653	+		Pf1N1B4_1970	0.49	-1.4
2,252,822	+		Pf1N1B4_1970	0.64	-1.1
2,252,822	+		Pf1N1B4_1970	0.64	-1.7
2,252,822	+		Pf1N1B4_1970	0.64	-0.5
2,252,822	+		Pf1N1B4_1970	0.64	+1.1
2,252,823	-		Pf1N1B4_1970	0.64	-0.5
2,252,823	-		Pf1N1B4_1970	0.64	+0.5
2,252,823	-		Pf1N1B4_1970	0.64	-0.5
2,252,910	+		Pf1N1B4_1970	0.72	+0.2
2,252,910	+		Pf1N1B4_1970	0.72	+0.8
2,252,911	-		Pf1N1B4_1970	0.72	-0.1
2,252,911	-		Pf1N1B4_1970	0.72	+0.0
2,252,911	-		Pf1N1B4_1970	0.72	-1.1
2,252,922	+		Pf1N1B4_1970	0.73	-0.3
2,252,922	+		Pf1N1B4_1970	0.73	+1.5
2,252,979	+		Pf1N1B4_1970	0.78	-0.3
2,252,988	+		Pf1N1B4_1970	0.78	-1.9
2,252,988	+		Pf1N1B4_1970	0.78	-0.1
2,252,988	+		Pf1N1B4_1970	0.78	-0.2
2,253,009	+		Pf1N1B4_1970	0.80	+0.8
2,253,115	+		Pf1N1B4_1970	0.89	+0.9
2,253,115	+		Pf1N1B4_1970	0.89	-0.1
2,253,115	+		Pf1N1B4_1970	0.89	-2.5
2,253,115	+		Pf1N1B4_1970	0.89	-2.4
2,253,132	+				+1.5
2,253,224	+				-0.5
2,253,224	+				+1.7
2,253,225	-				+0.9
2,253,225	-				-1.1
2,253,225	-				-0.1
2,253,225	-				+0.5
2,253,374	-		Pf1N1B4_1971	0.17	-1.1
2,253,701	+		Pf1N1B4_1971	0.56	-2.1
2,253,701	+		Pf1N1B4_1971	0.56	-2.0
2,253,701	+		Pf1N1B4_1971	0.56	-1.1
2,253,702	-		Pf1N1B4_1971	0.56	-0.5
2,253,702	-		Pf1N1B4_1971	0.56	+0.1
2,253,702	-		Pf1N1B4_1971	0.56	+0.0
2,253,764	+		Pf1N1B4_1971	0.64	-1.7
2,253,764	+		Pf1N1B4_1971	0.64	-0.1
2,253,860	+		Pf1N1B4_1971	0.75	-0.5
2,253,869	+		Pf1N1B4_1971	0.76	-0.5
2,253,869	+		Pf1N1B4_1971	0.76	-0.8
2,253,869	+		Pf1N1B4_1971	0.76	-0.5
2,253,870	-		Pf1N1B4_1971	0.76	-0.1
2,253,870	-		Pf1N1B4_1971	0.76	-0.9
2,253,998	-				-2.4
2,253,998	-				+1.0
2,253,998	-				-1.5
2,254,111	-				+0.3
2,254,225	+				+0.5
2,254,225	+				-1.1
2,254,225	+				-0.5
2,254,225	+				+1.0
2,254,225	+				-1.1
2,254,226	-				-1.5
2,254,226	-				+1.0
2,254,226	-				+1.0
2,254,226	-				-0.5
2,254,226	-				-1.1
2,254,305	-		Pf1N1B4_1972	0.14	-0.5
2,254,568	+		Pf1N1B4_1972	0.37	+0.5
2,254,568	+		Pf1N1B4_1972	0.37	-1.1
2,254,673	+		Pf1N1B4_1972	0.45	-0.5
2,254,673	+		Pf1N1B4_1972	0.45	+2.5
2,254,674	-		Pf1N1B4_1972	0.45	-0.1
2,254,674	-		Pf1N1B4_1972	0.45	-0.4
2,254,674	-		Pf1N1B4_1972	0.45	+0.0
2,254,674	-		Pf1N1B4_1972	0.45	-1.1
2,254,759	-		Pf1N1B4_1972	0.53	-0.5
2,254,777	+		Pf1N1B4_1972	0.54	-0.3
2,254,777	+		Pf1N1B4_1972	0.54	+0.0
2,254,777	+		Pf1N1B4_1972	0.54	+1.5
2,254,778	-		Pf1N1B4_1972	0.54	-0.3
2,254,884	-		Pf1N1B4_1972	0.63	+0.3
2,255,015	+		Pf1N1B4_1972	0.74	+0.5
2,255,037	+		Pf1N1B4_1972	0.76	-1.1