Experiment: Furfuryl Alcohol 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22720 and AO353_22725 are separated by 30 nucleotides AO353_22725 and AO353_22730 overlap by 4 nucleotides AO353_22730 and AO353_22735 are separated by 208 nucleotides AO353_22735 and AO353_22740 are separated by 77 nucleotides
AO353_22720: AO353_22720 - curli production assembly protein CsgG, at 4,976,597 to 4,977,277
_22720
AO353_22725: AO353_22725 - hypothetical protein, at 4,977,308 to 4,977,679
_22725
AO353_22730: AO353_22730 - hypothetical protein, at 4,977,676 to 4,978,335
_22730
AO353_22735: AO353_22735 - hypothetical protein, at 4,978,544 to 4,978,783
_22735
AO353_22740: AO353_22740 - sterol desaturase, at 4,978,861 to 4,980,015
_22740
Position (kb)
4977
4978
4979 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4976.777 kb on + strand, within AO353_22720 at 4976.777 kb on + strand, within AO353_22720 at 4976.778 kb on - strand, within AO353_22720 at 4976.778 kb on - strand, within AO353_22720 at 4976.778 kb on - strand, within AO353_22720 at 4976.778 kb on - strand, within AO353_22720 at 4977.050 kb on + strand, within AO353_22720 at 4977.051 kb on - strand, within AO353_22720 at 4977.080 kb on - strand, within AO353_22720 at 4977.101 kb on + strand, within AO353_22720 at 4977.101 kb on + strand, within AO353_22720 at 4977.125 kb on + strand, within AO353_22720 at 4977.125 kb on + strand, within AO353_22720 at 4977.174 kb on - strand, within AO353_22720 at 4977.301 kb on + strand at 4977.301 kb on + strand at 4977.301 kb on + strand at 4977.301 kb on + strand at 4977.302 kb on - strand at 4977.302 kb on - strand at 4977.302 kb on - strand at 4977.302 kb on - strand at 4977.302 kb on - strand at 4977.302 kb on - strand at 4977.320 kb on + strand at 4977.320 kb on + strand at 4977.320 kb on + strand at 4977.320 kb on + strand at 4977.320 kb on + strand at 4977.320 kb on + strand at 4977.321 kb on - strand at 4977.321 kb on - strand at 4977.321 kb on - strand at 4977.321 kb on - strand at 4977.321 kb on - strand at 4977.321 kb on - strand at 4977.322 kb on + strand at 4977.322 kb on + strand at 4977.322 kb on + strand at 4977.322 kb on + strand at 4977.322 kb on + strand at 4977.322 kb on + strand at 4977.322 kb on + strand at 4977.323 kb on - strand at 4977.323 kb on - strand at 4977.323 kb on - strand at 4977.323 kb on - strand at 4977.323 kb on - strand at 4977.323 kb on - strand at 4977.323 kb on - strand at 4977.323 kb on - strand at 4977.323 kb on - strand at 4977.323 kb on - strand at 4977.323 kb on - strand at 4977.398 kb on + strand, within AO353_22725 at 4977.428 kb on + strand, within AO353_22725 at 4977.429 kb on - strand, within AO353_22725 at 4977.434 kb on + strand, within AO353_22725 at 4977.435 kb on - strand, within AO353_22725 at 4977.435 kb on - strand, within AO353_22725 at 4977.554 kb on + strand, within AO353_22725 at 4977.554 kb on + strand, within AO353_22725 at 4977.554 kb on + strand, within AO353_22725 at 4977.555 kb on - strand, within AO353_22725 at 4977.632 kb on + strand, within AO353_22725 at 4977.632 kb on + strand, within AO353_22725 at 4977.632 kb on + strand, within AO353_22725 at 4977.632 kb on + strand, within AO353_22725 at 4977.632 kb on + strand, within AO353_22725 at 4977.632 kb on + strand, within AO353_22725 at 4977.632 kb on + strand, within AO353_22725 at 4977.632 kb on + strand, within AO353_22725 at 4977.632 kb on + strand, within AO353_22725 at 4977.761 kb on - strand, within AO353_22730 at 4977.769 kb on + strand, within AO353_22730 at 4977.770 kb on - strand, within AO353_22730 at 4977.770 kb on - strand, within AO353_22730 at 4977.770 kb on - strand, within AO353_22730 at 4977.841 kb on + strand, within AO353_22730 at 4977.841 kb on + strand, within AO353_22730 at 4977.842 kb on - strand, within AO353_22730 at 4977.842 kb on - strand, within AO353_22730 at 4977.842 kb on - strand, within AO353_22730 at 4977.861 kb on + strand, within AO353_22730 at 4977.861 kb on + strand, within AO353_22730 at 4977.861 kb on + strand, within AO353_22730 at 4977.861 kb on + strand, within AO353_22730 at 4977.866 kb on - strand, within AO353_22730 at 4977.886 kb on + strand, within AO353_22730 at 4977.889 kb on + strand, within AO353_22730 at 4977.889 kb on + strand, within AO353_22730 at 4977.889 kb on + strand, within AO353_22730 at 4977.889 kb on + strand, within AO353_22730 at 4977.890 kb on - strand, within AO353_22730 at 4977.890 kb on - strand, within AO353_22730 at 4977.890 kb on - strand, within AO353_22730 at 4977.890 kb on - strand, within AO353_22730 at 4977.890 kb on - strand, within AO353_22730 at 4977.890 kb on - strand, within AO353_22730 at 4977.890 kb on - strand, within AO353_22730 at 4978.012 kb on + strand, within AO353_22730 at 4978.012 kb on + strand, within AO353_22730 at 4978.013 kb on - strand, within AO353_22730 at 4978.013 kb on - strand, within AO353_22730 at 4978.013 kb on - strand, within AO353_22730 at 4978.017 kb on + strand, within AO353_22730 at 4978.030 kb on + strand, within AO353_22730 at 4978.030 kb on + strand, within AO353_22730 at 4978.031 kb on - strand at 4978.042 kb on + strand, within AO353_22730 at 4978.042 kb on + strand, within AO353_22730 at 4978.042 kb on + strand, within AO353_22730 at 4978.042 kb on + strand, within AO353_22730 at 4978.043 kb on - strand, within AO353_22730 at 4978.043 kb on - strand, within AO353_22730 at 4978.043 kb on - strand, within AO353_22730 at 4978.043 kb on - strand, within AO353_22730 at 4978.043 kb on - strand, within AO353_22730 at 4978.300 kb on + strand at 4978.321 kb on + strand at 4978.322 kb on - strand at 4978.322 kb on - strand at 4978.385 kb on + strand at 4978.385 kb on + strand at 4978.386 kb on - strand at 4978.453 kb on + strand at 4978.454 kb on - strand at 4978.565 kb on + strand at 4978.566 kb on - strand at 4978.646 kb on + strand, within AO353_22735 at 4978.646 kb on + strand, within AO353_22735 at 4978.646 kb on + strand, within AO353_22735 at 4978.647 kb on - strand, within AO353_22735 at 4978.647 kb on - strand, within AO353_22735 at 4978.860 kb on - strand at 4979.054 kb on + strand, within AO353_22740 at 4979.054 kb on + strand, within AO353_22740 at 4979.055 kb on - strand, within AO353_22740 at 4979.055 kb on - strand, within AO353_22740 at 4979.120 kb on + strand, within AO353_22740 at 4979.121 kb on - strand, within AO353_22740 at 4979.121 kb on - strand, within AO353_22740 at 4979.121 kb on - strand, within AO353_22740 at 4979.121 kb on - strand at 4979.121 kb on - strand, within AO353_22740
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.125 vol% remove 4,976,777 + AO353_22720 0.26 +0.9 4,976,777 + AO353_22720 0.26 +0.2 4,976,778 - AO353_22720 0.27 +1.7 4,976,778 - AO353_22720 0.27 +0.1 4,976,778 - AO353_22720 0.27 +1.0 4,976,778 - AO353_22720 0.27 -0.4 4,977,050 + AO353_22720 0.67 -0.5 4,977,051 - AO353_22720 0.67 +0.4 4,977,080 - AO353_22720 0.71 +0.1 4,977,101 + AO353_22720 0.74 -0.3 4,977,101 + AO353_22720 0.74 +0.3 4,977,125 + AO353_22720 0.78 -0.0 4,977,125 + AO353_22720 0.78 +1.1 4,977,174 - AO353_22720 0.85 +0.5 4,977,301 + +0.7 4,977,301 + +0.7 4,977,301 + +1.1 4,977,301 + -0.7 4,977,302 - +0.2 4,977,302 - -0.1 4,977,302 - +1.0 4,977,302 - +0.0 4,977,302 - +1.7 4,977,302 - -0.3 4,977,320 + -1.4 4,977,320 + -1.8 4,977,320 + +1.5 4,977,320 + +0.5 4,977,320 + +0.7 4,977,320 + +0.9 4,977,321 - -0.9 4,977,321 - -0.1 4,977,321 - -0.3 4,977,321 - -0.5 4,977,321 - -0.5 4,977,321 - -1.8 4,977,322 + +1.0 4,977,322 + +0.7 4,977,322 + +1.3 4,977,322 + -0.1 4,977,322 + -0.1 4,977,322 + -0.5 4,977,322 + +0.1 4,977,323 - +0.1 4,977,323 - -0.3 4,977,323 - -1.3 4,977,323 - +0.1 4,977,323 - -1.7 4,977,323 - +2.3 4,977,323 - +0.3 4,977,323 - +0.9 4,977,323 - +2.5 4,977,323 - -0.8 4,977,323 - -0.1 4,977,398 + AO353_22725 0.24 +0.5 4,977,428 + AO353_22725 0.32 +2.8 4,977,429 - AO353_22725 0.33 -0.6 4,977,434 + AO353_22725 0.34 +0.4 4,977,435 - AO353_22725 0.34 -0.3 4,977,435 - AO353_22725 0.34 -0.5 4,977,554 + AO353_22725 0.66 -0.1 4,977,554 + AO353_22725 0.66 +0.5 4,977,554 + AO353_22725 0.66 +0.8 4,977,555 - AO353_22725 0.66 +1.4 4,977,632 + AO353_22725 0.87 -0.3 4,977,632 + AO353_22725 0.87 +1.0 4,977,632 + AO353_22725 0.87 -0.2 4,977,632 + AO353_22725 0.87 -0.1 4,977,632 + AO353_22725 0.87 -0.1 4,977,632 + AO353_22725 0.87 -2.2 4,977,632 + AO353_22725 0.87 +1.7 4,977,632 + AO353_22725 0.87 +0.1 4,977,632 + AO353_22725 0.87 -1.7 4,977,761 - AO353_22730 0.13 -1.3 4,977,769 + AO353_22730 0.14 -0.1 4,977,770 - AO353_22730 0.14 +0.3 4,977,770 - AO353_22730 0.14 +0.0 4,977,770 - AO353_22730 0.14 +0.4 4,977,841 + AO353_22730 0.25 +2.1 4,977,841 + AO353_22730 0.25 +1.5 4,977,842 - AO353_22730 0.25 -1.1 4,977,842 - AO353_22730 0.25 +0.5 4,977,842 - AO353_22730 0.25 -0.8 4,977,861 + AO353_22730 0.28 +1.1 4,977,861 + AO353_22730 0.28 -0.2 4,977,861 + AO353_22730 0.28 +0.0 4,977,861 + AO353_22730 0.28 -1.5 4,977,866 - AO353_22730 0.29 +0.2 4,977,886 + AO353_22730 0.32 -0.4 4,977,889 + AO353_22730 0.32 -1.5 4,977,889 + AO353_22730 0.32 -0.1 4,977,889 + AO353_22730 0.32 -0.1 4,977,889 + AO353_22730 0.32 +1.2 4,977,890 - AO353_22730 0.32 +0.5 4,977,890 - AO353_22730 0.32 -1.3 4,977,890 - AO353_22730 0.32 +0.1 4,977,890 - AO353_22730 0.32 +1.3 4,977,890 - AO353_22730 0.32 -0.2 4,977,890 - AO353_22730 0.32 -0.2 4,977,890 - AO353_22730 0.32 -0.5 4,978,012 + AO353_22730 0.51 +0.4 4,978,012 + AO353_22730 0.51 +0.2 4,978,013 - AO353_22730 0.51 +0.5 4,978,013 - AO353_22730 0.51 +0.4 4,978,013 - AO353_22730 0.51 -1.9 4,978,017 + AO353_22730 0.52 +0.8 4,978,030 + AO353_22730 0.54 -2.8 4,978,030 + AO353_22730 0.54 -0.9 4,978,031 - -0.5 4,978,042 + AO353_22730 0.55 +0.1 4,978,042 + AO353_22730 0.55 -0.1 4,978,042 + AO353_22730 0.55 -0.3 4,978,042 + AO353_22730 0.55 +0.5 4,978,043 - AO353_22730 0.56 +0.7 4,978,043 - AO353_22730 0.56 -1.4 4,978,043 - AO353_22730 0.56 -1.5 4,978,043 - AO353_22730 0.56 -1.1 4,978,043 - AO353_22730 0.56 -0.7 4,978,300 + -0.2 4,978,321 + -0.2 4,978,322 - -0.0 4,978,322 - -2.9 4,978,385 + +0.5 4,978,385 + +1.5 4,978,386 - +0.8 4,978,453 + +1.8 4,978,454 - -0.5 4,978,565 + -0.2 4,978,566 - -1.1 4,978,646 + AO353_22735 0.42 -1.5 4,978,646 + AO353_22735 0.42 -0.8 4,978,646 + AO353_22735 0.42 -2.3 4,978,647 - AO353_22735 0.43 -0.9 4,978,647 - AO353_22735 0.43 -0.2 4,978,860 - +0.4 4,979,054 + AO353_22740 0.17 -0.1 4,979,054 + AO353_22740 0.17 +1.1 4,979,055 - AO353_22740 0.17 +0.1 4,979,055 - AO353_22740 0.17 +0.2 4,979,120 + AO353_22740 0.22 -1.2 4,979,121 - AO353_22740 0.23 +0.1 4,979,121 - AO353_22740 0.23 -0.5 4,979,121 - AO353_22740 0.23 -1.1 4,979,121 - +2.1 4,979,121 - AO353_22740 0.23 -0.8
Or see this region's nucleotide sequence