Experiment: Furfuryl Alcohol 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22350 and AO353_22355 are separated by 195 nucleotides AO353_22355 and AO353_22360 overlap by 4 nucleotides AO353_22360 and AO353_22365 overlap by 4 nucleotides AO353_22365 and AO353_22370 are separated by 30 nucleotides
AO353_22350: AO353_22350 - LuxR family transcriptional regulator, at 4,896,528 to 4,897,193
_22350
AO353_22355: AO353_22355 - multidrug ABC transporter permease, at 4,897,389 to 4,898,180
_22355
AO353_22360: AO353_22360 - ABC transporter ATP-binding protein, at 4,898,177 to 4,898,932
_22360
AO353_22365: AO353_22365 - hypothetical protein, at 4,898,929 to 4,899,888
_22365
AO353_22370: AO353_22370 - branched-chain amino acid ABC transporter substrate-binding protein, at 4,899,919 to 4,901,103
_22370
Position (kb)
4898
4899 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4897.189 kb on + strand at 4897.189 kb on + strand at 4897.190 kb on - strand at 4897.190 kb on - strand at 4897.190 kb on - strand at 4897.190 kb on - strand at 4897.219 kb on - strand at 4897.319 kb on + strand at 4897.319 kb on + strand at 4897.319 kb on + strand at 4897.319 kb on + strand at 4897.319 kb on + strand at 4897.319 kb on + strand at 4897.319 kb on + strand at 4897.320 kb on - strand at 4897.320 kb on - strand at 4897.320 kb on - strand at 4897.320 kb on - strand at 4897.320 kb on - strand at 4897.320 kb on - strand at 4897.354 kb on + strand at 4897.354 kb on + strand at 4897.354 kb on + strand at 4897.354 kb on + strand at 4897.354 kb on + strand at 4897.354 kb on + strand at 4897.355 kb on - strand at 4897.355 kb on - strand at 4897.355 kb on - strand at 4897.355 kb on - strand at 4897.355 kb on - strand at 4897.355 kb on - strand at 4897.358 kb on + strand at 4897.358 kb on + strand at 4897.358 kb on + strand at 4897.373 kb on + strand at 4897.373 kb on + strand at 4897.373 kb on + strand at 4897.373 kb on + strand at 4897.373 kb on + strand at 4897.373 kb on + strand at 4897.374 kb on - strand at 4897.374 kb on - strand at 4897.374 kb on - strand at 4897.378 kb on + strand at 4897.505 kb on - strand, within AO353_22355 at 4897.505 kb on - strand, within AO353_22355 at 4897.564 kb on + strand, within AO353_22355 at 4897.564 kb on + strand at 4897.564 kb on + strand, within AO353_22355 at 4897.564 kb on + strand, within AO353_22355 at 4897.566 kb on + strand, within AO353_22355 at 4897.566 kb on + strand, within AO353_22355 at 4897.566 kb on + strand, within AO353_22355 at 4897.567 kb on - strand at 4897.567 kb on - strand, within AO353_22355 at 4897.780 kb on + strand, within AO353_22355 at 4897.780 kb on + strand, within AO353_22355 at 4897.781 kb on - strand, within AO353_22355 at 4897.807 kb on + strand, within AO353_22355 at 4897.807 kb on + strand, within AO353_22355 at 4897.807 kb on + strand, within AO353_22355 at 4897.808 kb on - strand, within AO353_22355 at 4897.808 kb on - strand, within AO353_22355 at 4897.808 kb on - strand, within AO353_22355 at 4897.842 kb on + strand, within AO353_22355 at 4897.843 kb on - strand, within AO353_22355 at 4897.919 kb on - strand, within AO353_22355 at 4897.987 kb on + strand, within AO353_22355 at 4897.987 kb on + strand, within AO353_22355 at 4897.987 kb on + strand, within AO353_22355 at 4897.987 kb on + strand, within AO353_22355 at 4897.988 kb on - strand, within AO353_22355 at 4897.988 kb on - strand, within AO353_22355 at 4897.988 kb on - strand, within AO353_22355 at 4897.988 kb on - strand, within AO353_22355 at 4897.988 kb on - strand, within AO353_22355 at 4897.996 kb on + strand, within AO353_22355 at 4897.997 kb on - strand, within AO353_22355 at 4898.005 kb on + strand, within AO353_22355 at 4898.005 kb on + strand, within AO353_22355 at 4898.005 kb on + strand, within AO353_22355 at 4898.005 kb on + strand, within AO353_22355 at 4898.005 kb on + strand, within AO353_22355 at 4898.005 kb on + strand, within AO353_22355 at 4898.006 kb on - strand, within AO353_22355 at 4898.006 kb on - strand, within AO353_22355 at 4898.006 kb on - strand, within AO353_22355 at 4898.006 kb on - strand, within AO353_22355 at 4898.006 kb on - strand, within AO353_22355 at 4898.006 kb on - strand, within AO353_22355 at 4898.006 kb on - strand, within AO353_22355 at 4898.170 kb on + strand at 4898.170 kb on + strand at 4898.775 kb on + strand, within AO353_22360 at 4898.775 kb on + strand, within AO353_22360 at 4898.776 kb on - strand, within AO353_22360 at 4898.776 kb on - strand, within AO353_22360 at 4898.776 kb on - strand, within AO353_22360 at 4898.776 kb on - strand, within AO353_22360 at 4898.776 kb on - strand at 4899.013 kb on + strand at 4899.014 kb on - strand at 4899.101 kb on + strand at 4899.102 kb on - strand, within AO353_22365 at 4899.102 kb on - strand, within AO353_22365 at 4899.102 kb on - strand, within AO353_22365 at 4899.173 kb on + strand, within AO353_22365 at 4899.173 kb on + strand, within AO353_22365 at 4899.173 kb on + strand, within AO353_22365 at 4899.173 kb on + strand, within AO353_22365 at 4899.173 kb on + strand, within AO353_22365 at 4899.174 kb on - strand at 4899.174 kb on - strand, within AO353_22365 at 4899.174 kb on - strand, within AO353_22365 at 4899.211 kb on + strand, within AO353_22365 at 4899.212 kb on - strand, within AO353_22365 at 4899.212 kb on - strand, within AO353_22365 at 4899.569 kb on + strand, within AO353_22365 at 4899.569 kb on + strand, within AO353_22365 at 4899.569 kb on + strand, within AO353_22365 at 4899.569 kb on + strand, within AO353_22365 at 4899.570 kb on - strand, within AO353_22365 at 4899.570 kb on - strand, within AO353_22365 at 4899.570 kb on - strand, within AO353_22365 at 4899.695 kb on + strand, within AO353_22365 at 4899.696 kb on - strand, within AO353_22365 at 4899.696 kb on - strand, within AO353_22365 at 4899.696 kb on - strand, within AO353_22365 at 4899.696 kb on - strand, within AO353_22365 at 4899.696 kb on - strand, within AO353_22365 at 4899.705 kb on + strand, within AO353_22365 at 4899.705 kb on + strand, within AO353_22365 at 4899.706 kb on - strand, within AO353_22365 at 4899.706 kb on - strand, within AO353_22365 at 4899.900 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.125 vol% remove 4,897,189 + -0.0 4,897,189 + -1.7 4,897,190 - -1.2 4,897,190 - +0.7 4,897,190 - +0.5 4,897,190 - -2.1 4,897,219 - -1.1 4,897,319 + +0.5 4,897,319 + -0.1 4,897,319 + -0.2 4,897,319 + +1.2 4,897,319 + -0.8 4,897,319 + -0.5 4,897,319 + -1.8 4,897,320 - +0.5 4,897,320 - -0.3 4,897,320 - +2.8 4,897,320 - -0.5 4,897,320 - -1.1 4,897,320 - -0.1 4,897,354 + +0.9 4,897,354 + -1.5 4,897,354 + -0.1 4,897,354 + -0.1 4,897,354 + +1.5 4,897,354 + -1.5 4,897,355 - +0.4 4,897,355 - -1.0 4,897,355 - -1.3 4,897,355 - +0.6 4,897,355 - +0.5 4,897,355 - +1.5 4,897,358 + -1.3 4,897,358 + +2.8 4,897,358 + +0.5 4,897,373 + -1.1 4,897,373 + +0.0 4,897,373 + -0.1 4,897,373 + -0.4 4,897,373 + +1.2 4,897,373 + +0.6 4,897,374 - -0.6 4,897,374 - -0.6 4,897,374 - +0.5 4,897,378 + +0.5 4,897,505 - AO353_22355 0.15 -0.1 4,897,505 - AO353_22355 0.15 -0.1 4,897,564 + AO353_22355 0.22 +0.6 4,897,564 + +0.5 4,897,564 + AO353_22355 0.22 +0.7 4,897,564 + AO353_22355 0.22 -2.1 4,897,566 + AO353_22355 0.22 -0.1 4,897,566 + AO353_22355 0.22 +0.2 4,897,566 + AO353_22355 0.22 -0.1 4,897,567 - -0.1 4,897,567 - AO353_22355 0.22 +1.3 4,897,780 + AO353_22355 0.49 -1.8 4,897,780 + AO353_22355 0.49 -0.7 4,897,781 - AO353_22355 0.49 -1.1 4,897,807 + AO353_22355 0.53 -0.7 4,897,807 + AO353_22355 0.53 -0.7 4,897,807 + AO353_22355 0.53 -1.8 4,897,808 - AO353_22355 0.53 -1.0 4,897,808 - AO353_22355 0.53 +0.3 4,897,808 - AO353_22355 0.53 +0.5 4,897,842 + AO353_22355 0.57 +2.1 4,897,843 - AO353_22355 0.57 -0.1 4,897,919 - AO353_22355 0.67 +0.1 4,897,987 + AO353_22355 0.76 +1.2 4,897,987 + AO353_22355 0.76 +0.9 4,897,987 + AO353_22355 0.76 +0.4 4,897,987 + AO353_22355 0.76 +0.0 4,897,988 - AO353_22355 0.76 -0.5 4,897,988 - AO353_22355 0.76 +1.1 4,897,988 - AO353_22355 0.76 +0.8 4,897,988 - AO353_22355 0.76 -1.8 4,897,988 - AO353_22355 0.76 +0.8 4,897,996 + AO353_22355 0.77 +0.8 4,897,997 - AO353_22355 0.77 +2.0 4,898,005 + AO353_22355 0.78 +0.4 4,898,005 + AO353_22355 0.78 -0.5 4,898,005 + AO353_22355 0.78 -0.9 4,898,005 + AO353_22355 0.78 +1.1 4,898,005 + AO353_22355 0.78 +1.2 4,898,005 + AO353_22355 0.78 +0.1 4,898,006 - AO353_22355 0.78 +0.7 4,898,006 - AO353_22355 0.78 -0.1 4,898,006 - AO353_22355 0.78 -1.5 4,898,006 - AO353_22355 0.78 +0.6 4,898,006 - AO353_22355 0.78 -1.5 4,898,006 - AO353_22355 0.78 -0.1 4,898,006 - AO353_22355 0.78 +0.5 4,898,170 + -0.3 4,898,170 + -1.4 4,898,775 + AO353_22360 0.79 -0.7 4,898,775 + AO353_22360 0.79 +0.8 4,898,776 - AO353_22360 0.79 -2.1 4,898,776 - AO353_22360 0.79 -0.9 4,898,776 - AO353_22360 0.79 -0.7 4,898,776 - AO353_22360 0.79 +0.1 4,898,776 - +0.9 4,899,013 + +0.5 4,899,014 - +0.2 4,899,101 + +0.5 4,899,102 - AO353_22365 0.18 +0.4 4,899,102 - AO353_22365 0.18 -0.1 4,899,102 - AO353_22365 0.18 +2.1 4,899,173 + AO353_22365 0.25 -0.5 4,899,173 + AO353_22365 0.25 -1.1 4,899,173 + AO353_22365 0.25 -0.7 4,899,173 + AO353_22365 0.25 +0.9 4,899,173 + AO353_22365 0.25 +1.1 4,899,174 - +0.5 4,899,174 - AO353_22365 0.26 -1.5 4,899,174 - AO353_22365 0.26 +0.5 4,899,211 + AO353_22365 0.29 +0.5 4,899,212 - AO353_22365 0.29 +0.3 4,899,212 - AO353_22365 0.29 +0.8 4,899,569 + AO353_22365 0.67 +0.3 4,899,569 + AO353_22365 0.67 -0.3 4,899,569 + AO353_22365 0.67 +0.1 4,899,569 + AO353_22365 0.67 -2.1 4,899,570 - AO353_22365 0.67 +0.0 4,899,570 - AO353_22365 0.67 +0.2 4,899,570 - AO353_22365 0.67 -0.8 4,899,695 + AO353_22365 0.80 +0.7 4,899,696 - AO353_22365 0.80 +0.8 4,899,696 - AO353_22365 0.80 -0.9 4,899,696 - AO353_22365 0.80 +0.5 4,899,696 - AO353_22365 0.80 +0.5 4,899,696 - AO353_22365 0.80 +0.2 4,899,705 + AO353_22365 0.81 +2.1 4,899,705 + AO353_22365 0.81 +0.0 4,899,706 - AO353_22365 0.81 +0.5 4,899,706 - AO353_22365 0.81 -0.1 4,899,900 + +2.5
Or see this region's nucleotide sequence