Experiment: Furfuryl Alcohol 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_19595 and AO353_19600 are separated by 143 nucleotides AO353_19600 and AO353_19605 are separated by 11 nucleotides AO353_19605 and AO353_19610 are separated by 533 nucleotides
AO353_19595: AO353_19595 - cell division protein, at 4,294,724 to 4,295,206
_19595
AO353_19600: AO353_19600 - NAD-dependent DNA ligase, at 4,295,350 to 4,295,982
_19600
AO353_19605: AO353_19605 - hypothetical protein, at 4,295,994 to 4,296,383
_19605
AO353_19610: AO353_19610 - hypothetical protein, at 4,296,917 to 4,297,288
_19610
Position (kb)
4295
4296
4297 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4295.082 kb on + strand, within AO353_19595 at 4295.083 kb on - strand, within AO353_19595 at 4295.157 kb on + strand, within AO353_19595 at 4295.157 kb on + strand, within AO353_19595 at 4295.157 kb on + strand, within AO353_19595 at 4295.158 kb on - strand at 4295.158 kb on - strand at 4295.158 kb on - strand at 4295.158 kb on - strand at 4295.158 kb on - strand at 4295.158 kb on - strand at 4295.158 kb on - strand at 4295.188 kb on + strand at 4295.188 kb on + strand at 4295.189 kb on - strand at 4295.243 kb on + strand at 4295.264 kb on - strand at 4295.264 kb on - strand at 4295.264 kb on - strand at 4295.282 kb on - strand at 4295.282 kb on - strand at 4295.299 kb on + strand at 4295.300 kb on - strand at 4295.315 kb on - strand at 4295.351 kb on + strand at 4295.351 kb on + strand at 4295.351 kb on + strand at 4295.351 kb on + strand at 4295.352 kb on - strand at 4295.451 kb on + strand, within AO353_19600 at 4295.451 kb on + strand, within AO353_19600 at 4295.451 kb on + strand, within AO353_19600 at 4295.451 kb on + strand, within AO353_19600 at 4295.451 kb on + strand, within AO353_19600 at 4295.451 kb on + strand, within AO353_19600 at 4295.451 kb on + strand, within AO353_19600 at 4295.451 kb on + strand, within AO353_19600 at 4295.451 kb on + strand, within AO353_19600 at 4295.451 kb on + strand, within AO353_19600 at 4295.452 kb on - strand, within AO353_19600 at 4295.452 kb on - strand, within AO353_19600 at 4295.452 kb on - strand, within AO353_19600 at 4295.495 kb on + strand, within AO353_19600 at 4295.495 kb on + strand, within AO353_19600 at 4295.496 kb on - strand, within AO353_19600 at 4295.496 kb on - strand, within AO353_19600 at 4295.496 kb on - strand, within AO353_19600 at 4295.496 kb on - strand, within AO353_19600 at 4295.542 kb on + strand, within AO353_19600 at 4295.576 kb on + strand, within AO353_19600 at 4295.577 kb on - strand, within AO353_19600 at 4295.655 kb on + strand, within AO353_19600 at 4295.780 kb on + strand, within AO353_19600 at 4295.781 kb on - strand, within AO353_19600 at 4295.781 kb on - strand, within AO353_19600 at 4295.971 kb on + strand at 4295.971 kb on + strand at 4295.971 kb on + strand at 4295.971 kb on + strand at 4295.971 kb on + strand at 4295.971 kb on + strand at 4295.972 kb on - strand at 4295.972 kb on - strand at 4295.972 kb on - strand at 4295.972 kb on - strand at 4295.995 kb on + strand at 4295.995 kb on + strand at 4295.995 kb on + strand at 4295.995 kb on + strand at 4295.996 kb on - strand at 4295.996 kb on - strand at 4295.996 kb on - strand at 4296.025 kb on + strand at 4296.026 kb on - strand at 4296.026 kb on - strand at 4296.026 kb on - strand at 4296.145 kb on + strand, within AO353_19605 at 4296.145 kb on + strand, within AO353_19605 at 4296.146 kb on - strand, within AO353_19605 at 4296.146 kb on - strand, within AO353_19605 at 4296.447 kb on + strand at 4296.447 kb on + strand at 4296.447 kb on + strand at 4296.448 kb on - strand at 4296.448 kb on - strand at 4296.448 kb on - strand at 4296.448 kb on - strand at 4296.448 kb on - strand at 4296.458 kb on + strand at 4296.478 kb on - strand at 4296.506 kb on + strand at 4296.515 kb on + strand at 4296.516 kb on - strand at 4296.528 kb on + strand at 4296.528 kb on + strand at 4296.538 kb on + strand at 4296.539 kb on - strand at 4296.556 kb on + strand at 4296.556 kb on + strand at 4296.649 kb on - strand at 4296.649 kb on - strand at 4296.665 kb on + strand at 4296.665 kb on + strand at 4296.665 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.741 kb on + strand at 4296.742 kb on - strand at 4296.742 kb on - strand at 4296.742 kb on - strand at 4296.742 kb on - strand at 4296.742 kb on - strand at 4296.742 kb on - strand at 4296.776 kb on - strand at 4296.912 kb on + strand at 4297.019 kb on + strand, within AO353_19610 at 4297.019 kb on + strand, within AO353_19610 at 4297.019 kb on + strand, within AO353_19610 at 4297.020 kb on - strand, within AO353_19610 at 4297.020 kb on - strand, within AO353_19610 at 4297.026 kb on + strand, within AO353_19610 at 4297.026 kb on + strand, within AO353_19610 at 4297.026 kb on + strand, within AO353_19610 at 4297.027 kb on - strand, within AO353_19610
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.125 vol% remove 4,295,082 + AO353_19595 0.74 -1.7 4,295,083 - AO353_19595 0.74 -1.3 4,295,157 + AO353_19595 0.90 -0.3 4,295,157 + AO353_19595 0.90 +0.5 4,295,157 + AO353_19595 0.90 -2.2 4,295,158 - +2.5 4,295,158 - -0.0 4,295,158 - -0.3 4,295,158 - +0.2 4,295,158 - +1.2 4,295,158 - +0.7 4,295,158 - -0.2 4,295,188 + -0.3 4,295,188 + -0.3 4,295,189 - +0.8 4,295,243 + +0.7 4,295,264 - -1.3 4,295,264 - +0.3 4,295,264 - -2.2 4,295,282 - +1.4 4,295,282 - +0.4 4,295,299 + -0.3 4,295,300 - -0.3 4,295,315 - -0.9 4,295,351 + +0.4 4,295,351 + -0.5 4,295,351 + +0.5 4,295,351 + -0.1 4,295,352 - -0.4 4,295,451 + AO353_19600 0.16 -0.9 4,295,451 + AO353_19600 0.16 -0.0 4,295,451 + AO353_19600 0.16 +0.1 4,295,451 + AO353_19600 0.16 -0.5 4,295,451 + AO353_19600 0.16 +2.0 4,295,451 + AO353_19600 0.16 -0.1 4,295,451 + AO353_19600 0.16 +0.6 4,295,451 + AO353_19600 0.16 +0.5 4,295,451 + AO353_19600 0.16 +0.5 4,295,451 + AO353_19600 0.16 +0.6 4,295,452 - AO353_19600 0.16 -0.5 4,295,452 - AO353_19600 0.16 -0.7 4,295,452 - AO353_19600 0.16 +0.3 4,295,495 + AO353_19600 0.23 +2.0 4,295,495 + AO353_19600 0.23 -0.4 4,295,496 - AO353_19600 0.23 +0.3 4,295,496 - AO353_19600 0.23 +0.1 4,295,496 - AO353_19600 0.23 +0.1 4,295,496 - AO353_19600 0.23 +0.2 4,295,542 + AO353_19600 0.30 -1.9 4,295,576 + AO353_19600 0.36 +0.2 4,295,577 - AO353_19600 0.36 -0.5 4,295,655 + AO353_19600 0.48 -0.1 4,295,780 + AO353_19600 0.68 +0.6 4,295,781 - AO353_19600 0.68 -0.9 4,295,781 - AO353_19600 0.68 -0.7 4,295,971 + -0.3 4,295,971 + +0.3 4,295,971 + +0.1 4,295,971 + -2.5 4,295,971 + -1.9 4,295,971 + +1.3 4,295,972 - +0.7 4,295,972 - -0.8 4,295,972 - +2.0 4,295,972 - +0.7 4,295,995 + +1.4 4,295,995 + -1.3 4,295,995 + -1.3 4,295,995 + +1.2 4,295,996 - +0.1 4,295,996 - -0.5 4,295,996 - -2.3 4,296,025 + -0.3 4,296,026 - +0.0 4,296,026 - +1.0 4,296,026 - -0.9 4,296,145 + AO353_19605 0.39 -0.9 4,296,145 + AO353_19605 0.39 -0.3 4,296,146 - AO353_19605 0.39 -1.2 4,296,146 - AO353_19605 0.39 +1.7 4,296,447 + +1.0 4,296,447 + -1.0 4,296,447 + +0.1 4,296,448 - -0.3 4,296,448 - +0.7 4,296,448 - +0.8 4,296,448 - -0.7 4,296,448 - -0.9 4,296,458 + +1.5 4,296,478 - -0.8 4,296,506 + -0.7 4,296,515 + +0.2 4,296,516 - -0.6 4,296,528 + +0.2 4,296,528 + -0.1 4,296,538 + +1.0 4,296,539 - -0.3 4,296,556 + -1.5 4,296,556 + +3.2 4,296,649 - -0.9 4,296,649 - -1.3 4,296,665 + -0.3 4,296,665 + -0.3 4,296,665 + -0.9 4,296,741 + +0.5 4,296,741 + +0.8 4,296,741 + -0.3 4,296,741 + -0.8 4,296,741 + +0.8 4,296,741 + +0.2 4,296,741 + -0.7 4,296,741 + -0.2 4,296,741 + +0.1 4,296,741 + -0.7 4,296,741 + -1.2 4,296,741 + -0.3 4,296,741 + -0.2 4,296,741 + +0.4 4,296,741 + -2.8 4,296,741 + +0.7 4,296,741 + +1.2 4,296,741 + +1.7 4,296,741 + +0.1 4,296,742 - +0.3 4,296,742 - -0.1 4,296,742 - -0.9 4,296,742 - -0.5 4,296,742 - +0.3 4,296,742 - -1.1 4,296,776 - +0.1 4,296,912 + +1.1 4,297,019 + AO353_19610 0.27 -0.3 4,297,019 + AO353_19610 0.27 +0.4 4,297,019 + AO353_19610 0.27 -1.1 4,297,020 - AO353_19610 0.28 +0.9 4,297,020 - AO353_19610 0.28 -2.3 4,297,026 + AO353_19610 0.29 +0.5 4,297,026 + AO353_19610 0.29 -1.5 4,297,026 + AO353_19610 0.29 -0.6 4,297,027 - AO353_19610 0.30 -0.2
Or see this region's nucleotide sequence