Experiment: Furfuryl Alcohol 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_18920 and AO353_18925 are separated by 211 nucleotides AO353_18925 and AO353_18930 are separated by 105 nucleotides
AO353_18920: AO353_18920 - potassium-transporting ATPase subunit B, at 4,156,528 to 4,158,606
_18920
AO353_18925: AO353_18925 - ATPase, at 4,158,818 to 4,159,363
_18925
AO353_18930: AO353_18930 - histidine kinase, at 4,159,469 to 4,162,120
_18930
Position (kb)
4158
4159
4160 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4157.913 kb on + strand, within AO353_18920 at 4158.252 kb on + strand, within AO353_18920 at 4158.253 kb on - strand, within AO353_18920 at 4158.316 kb on + strand, within AO353_18920 at 4158.316 kb on + strand, within AO353_18920 at 4158.317 kb on - strand, within AO353_18920 at 4158.317 kb on - strand, within AO353_18920 at 4158.317 kb on - strand, within AO353_18920 at 4158.526 kb on + strand at 4158.526 kb on + strand at 4158.526 kb on + strand at 4158.527 kb on - strand at 4158.527 kb on - strand at 4158.605 kb on - strand at 4158.693 kb on + strand at 4158.694 kb on - strand at 4158.713 kb on - strand at 4158.713 kb on - strand at 4158.713 kb on - strand at 4158.774 kb on + strand at 4158.774 kb on + strand at 4158.774 kb on + strand at 4158.774 kb on + strand at 4158.775 kb on - strand at 4158.775 kb on - strand at 4158.775 kb on - strand at 4158.775 kb on - strand at 4158.775 kb on - strand at 4158.793 kb on + strand at 4158.793 kb on + strand at 4158.793 kb on + strand at 4158.794 kb on - strand at 4158.794 kb on - strand at 4158.794 kb on - strand at 4158.794 kb on - strand at 4158.826 kb on + strand at 4158.826 kb on + strand at 4158.826 kb on + strand at 4158.826 kb on + strand at 4158.826 kb on + strand at 4158.826 kb on + strand at 4158.826 kb on + strand at 4158.826 kb on + strand at 4158.826 kb on + strand at 4158.827 kb on - strand at 4158.827 kb on - strand at 4158.827 kb on - strand at 4158.827 kb on - strand at 4158.827 kb on - strand at 4158.827 kb on - strand at 4158.827 kb on - strand at 4158.827 kb on - strand at 4159.053 kb on + strand, within AO353_18925 at 4159.085 kb on - strand, within AO353_18925 at 4159.261 kb on - strand, within AO353_18925 at 4159.309 kb on - strand at 4159.361 kb on + strand at 4159.393 kb on + strand at 4159.394 kb on - strand at 4159.403 kb on + strand at 4159.403 kb on + strand at 4159.403 kb on + strand at 4159.404 kb on - strand at 4159.416 kb on - strand at 4159.416 kb on - strand at 4159.509 kb on + strand at 4159.509 kb on + strand at 4159.575 kb on - strand at 4159.575 kb on - strand at 4159.575 kb on - strand at 4159.575 kb on - strand at 4159.605 kb on + strand at 4159.605 kb on + strand at 4159.606 kb on - strand at 4159.712 kb on + strand at 4159.713 kb on - strand at 4159.910 kb on - strand, within AO353_18930 at 4159.938 kb on + strand, within AO353_18930 at 4159.938 kb on + strand, within AO353_18930 at 4159.938 kb on + strand, within AO353_18930 at 4159.938 kb on + strand, within AO353_18930 at 4159.938 kb on + strand, within AO353_18930 at 4159.939 kb on - strand, within AO353_18930 at 4159.939 kb on - strand, within AO353_18930 at 4159.939 kb on - strand, within AO353_18930 at 4159.939 kb on - strand, within AO353_18930 at 4159.939 kb on - strand, within AO353_18930 at 4159.982 kb on + strand, within AO353_18930 at 4160.048 kb on + strand, within AO353_18930 at 4160.048 kb on + strand, within AO353_18930 at 4160.048 kb on + strand, within AO353_18930 at 4160.048 kb on + strand, within AO353_18930 at 4160.049 kb on - strand, within AO353_18930 at 4160.049 kb on - strand, within AO353_18930 at 4160.256 kb on + strand, within AO353_18930
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.125 vol% remove 4,157,913 + AO353_18920 0.67 +0.4 4,158,252 + AO353_18920 0.83 -0.6 4,158,253 - AO353_18920 0.83 -1.0 4,158,316 + AO353_18920 0.86 -1.7 4,158,316 + AO353_18920 0.86 -0.7 4,158,317 - AO353_18920 0.86 -0.1 4,158,317 - AO353_18920 0.86 +2.1 4,158,317 - AO353_18920 0.86 +0.7 4,158,526 + -1.0 4,158,526 + -0.7 4,158,526 + +1.0 4,158,527 - -1.1 4,158,527 - -1.1 4,158,605 - +0.5 4,158,693 + +0.4 4,158,694 - +1.0 4,158,713 - -0.6 4,158,713 - +0.3 4,158,713 - -0.5 4,158,774 + +0.2 4,158,774 + -0.8 4,158,774 + -2.7 4,158,774 + +0.2 4,158,775 - +0.7 4,158,775 - -0.3 4,158,775 - -0.4 4,158,775 - -1.0 4,158,775 - +0.3 4,158,793 + +1.0 4,158,793 + -0.6 4,158,793 + +0.7 4,158,794 - -1.1 4,158,794 - -0.5 4,158,794 - +0.5 4,158,794 - +1.0 4,158,826 + -1.3 4,158,826 + -0.1 4,158,826 + -1.0 4,158,826 + -1.3 4,158,826 + +0.7 4,158,826 + +0.7 4,158,826 + +0.7 4,158,826 + +0.3 4,158,826 + -0.3 4,158,827 - -0.1 4,158,827 - +1.3 4,158,827 - -0.3 4,158,827 - +0.9 4,158,827 - +0.7 4,158,827 - -1.6 4,158,827 - -0.4 4,158,827 - +0.2 4,159,053 + AO353_18925 0.43 +0.2 4,159,085 - AO353_18925 0.49 -0.1 4,159,261 - AO353_18925 0.81 -1.3 4,159,309 - -0.3 4,159,361 + +0.0 4,159,393 + -1.8 4,159,394 - +0.0 4,159,403 + -1.8 4,159,403 + +0.3 4,159,403 + -0.7 4,159,404 - +0.1 4,159,416 - +0.7 4,159,416 - -0.3 4,159,509 + +0.3 4,159,509 + +0.9 4,159,575 - -0.9 4,159,575 - -0.1 4,159,575 - +1.0 4,159,575 - -1.3 4,159,605 + +0.0 4,159,605 + -0.2 4,159,606 - +1.3 4,159,712 + -1.3 4,159,713 - -0.6 4,159,910 - AO353_18930 0.17 -1.1 4,159,938 + AO353_18930 0.18 +1.3 4,159,938 + AO353_18930 0.18 -0.6 4,159,938 + AO353_18930 0.18 -1.6 4,159,938 + AO353_18930 0.18 -0.4 4,159,938 + AO353_18930 0.18 -0.3 4,159,939 - AO353_18930 0.18 +0.0 4,159,939 - AO353_18930 0.18 +0.7 4,159,939 - AO353_18930 0.18 -2.1 4,159,939 - AO353_18930 0.18 +0.5 4,159,939 - AO353_18930 0.18 -1.3 4,159,982 + AO353_18930 0.19 -0.3 4,160,048 + AO353_18930 0.22 -1.1 4,160,048 + AO353_18930 0.22 +1.3 4,160,048 + AO353_18930 0.22 -0.4 4,160,048 + AO353_18930 0.22 -0.3 4,160,049 - AO353_18930 0.22 +0.1 4,160,049 - AO353_18930 0.22 +0.5 4,160,256 + AO353_18930 0.30 -0.0
Or see this region's nucleotide sequence