Experiment: Furfuryl Alcohol 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_17625 and AO353_17630 are separated by 31 nucleotides AO353_17630 and AO353_17635 are separated by 8 nucleotides AO353_17635 and AO353_17640 are separated by 248 nucleotides
AO353_17625: AO353_17625 - RNA polymerase subunit sigma, at 3,885,297 to 3,885,878
_17625
AO353_17630: AO353_17630 - RNA polymerase subunit sigma, at 3,885,910 to 3,886,497
_17630
AO353_17635: AO353_17635 - RNA polymerase subunit sigma, at 3,886,506 to 3,887,465
_17635
AO353_17640: AO353_17640 - serine peptidase, at 3,887,714 to 3,889,141
_17640
Position (kb)
3886
3887
3888 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3885.510 kb on + strand, within AO353_17625 at 3885.510 kb on + strand, within AO353_17625 at 3885.510 kb on + strand, within AO353_17625 at 3885.510 kb on + strand, within AO353_17625 at 3885.511 kb on - strand, within AO353_17625 at 3885.512 kb on + strand, within AO353_17625 at 3885.512 kb on + strand, within AO353_17625 at 3885.513 kb on - strand, within AO353_17625 at 3885.552 kb on + strand, within AO353_17625 at 3885.552 kb on + strand, within AO353_17625 at 3885.552 kb on + strand, within AO353_17625 at 3885.553 kb on - strand, within AO353_17625 at 3885.553 kb on - strand, within AO353_17625 at 3885.615 kb on + strand, within AO353_17625 at 3885.615 kb on + strand, within AO353_17625 at 3885.615 kb on + strand, within AO353_17625 at 3885.615 kb on + strand, within AO353_17625 at 3885.616 kb on - strand, within AO353_17625 at 3885.616 kb on - strand, within AO353_17625 at 3885.616 kb on - strand, within AO353_17625 at 3885.616 kb on - strand, within AO353_17625 at 3885.616 kb on - strand, within AO353_17625 at 3885.616 kb on - strand, within AO353_17625 at 3885.724 kb on + strand, within AO353_17625 at 3885.724 kb on + strand, within AO353_17625 at 3885.724 kb on + strand, within AO353_17625 at 3885.728 kb on + strand, within AO353_17625 at 3885.728 kb on + strand, within AO353_17625 at 3885.729 kb on - strand, within AO353_17625 at 3885.737 kb on - strand, within AO353_17625 at 3885.742 kb on + strand, within AO353_17625 at 3885.766 kb on - strand, within AO353_17625 at 3885.804 kb on - strand, within AO353_17625 at 3886.222 kb on + strand, within AO353_17630 at 3886.222 kb on + strand, within AO353_17630 at 3886.466 kb on - strand at 3886.466 kb on - strand at 3886.466 kb on - strand at 3886.466 kb on - strand at 3886.466 kb on - strand at 3886.522 kb on + strand at 3886.523 kb on - strand at 3886.523 kb on - strand at 3886.523 kb on - strand at 3886.526 kb on + strand at 3886.526 kb on + strand at 3886.526 kb on + strand at 3886.526 kb on + strand at 3886.526 kb on + strand at 3886.526 kb on + strand at 3886.526 kb on + strand at 3886.527 kb on - strand at 3886.527 kb on - strand at 3886.564 kb on - strand at 3886.564 kb on - strand at 3886.649 kb on + strand, within AO353_17635 at 3886.650 kb on - strand, within AO353_17635 at 3886.650 kb on - strand, within AO353_17635 at 3886.655 kb on + strand, within AO353_17635 at 3886.656 kb on - strand, within AO353_17635 at 3886.714 kb on + strand, within AO353_17635 at 3886.714 kb on + strand, within AO353_17635 at 3886.715 kb on - strand, within AO353_17635 at 3886.747 kb on + strand, within AO353_17635 at 3886.763 kb on + strand, within AO353_17635 at 3886.763 kb on + strand, within AO353_17635 at 3886.763 kb on + strand, within AO353_17635 at 3886.764 kb on - strand, within AO353_17635 at 3886.764 kb on - strand, within AO353_17635 at 3886.805 kb on + strand, within AO353_17635 at 3886.805 kb on + strand, within AO353_17635 at 3886.806 kb on - strand, within AO353_17635 at 3886.858 kb on - strand, within AO353_17635 at 3886.858 kb on - strand, within AO353_17635 at 3886.858 kb on - strand, within AO353_17635 at 3887.149 kb on + strand, within AO353_17635 at 3887.149 kb on + strand, within AO353_17635 at 3887.149 kb on + strand, within AO353_17635 at 3887.150 kb on - strand, within AO353_17635 at 3887.189 kb on + strand, within AO353_17635 at 3887.190 kb on - strand, within AO353_17635 at 3887.190 kb on - strand, within AO353_17635 at 3887.195 kb on + strand, within AO353_17635 at 3887.196 kb on - strand, within AO353_17635 at 3887.244 kb on + strand, within AO353_17635 at 3887.244 kb on + strand, within AO353_17635 at 3887.244 kb on + strand, within AO353_17635 at 3887.244 kb on + strand, within AO353_17635 at 3887.244 kb on + strand, within AO353_17635 at 3887.244 kb on + strand, within AO353_17635 at 3887.244 kb on + strand, within AO353_17635 at 3887.244 kb on + strand, within AO353_17635 at 3887.244 kb on + strand, within AO353_17635 at 3887.244 kb on + strand, within AO353_17635 at 3887.244 kb on + strand, within AO353_17635 at 3887.244 kb on + strand, within AO353_17635 at 3887.245 kb on - strand, within AO353_17635 at 3887.245 kb on - strand, within AO353_17635 at 3887.245 kb on - strand, within AO353_17635 at 3887.245 kb on - strand, within AO353_17635 at 3887.245 kb on - strand, within AO353_17635 at 3887.245 kb on - strand, within AO353_17635 at 3887.245 kb on - strand, within AO353_17635 at 3887.245 kb on - strand, within AO353_17635 at 3887.316 kb on - strand, within AO353_17635 at 3887.316 kb on - strand, within AO353_17635 at 3887.323 kb on + strand, within AO353_17635 at 3887.386 kb on + strand at 3887.386 kb on + strand at 3887.387 kb on - strand at 3887.444 kb on + strand at 3887.444 kb on + strand at 3887.445 kb on - strand at 3887.592 kb on + strand at 3887.592 kb on + strand at 3887.594 kb on + strand at 3887.594 kb on + strand at 3887.594 kb on + strand at 3887.653 kb on + strand at 3887.653 kb on + strand at 3887.653 kb on + strand at 3887.653 kb on + strand at 3887.653 kb on + strand at 3887.653 kb on + strand at 3887.653 kb on + strand at 3887.665 kb on + strand at 3888.038 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.125 vol% remove 3,885,510 + AO353_17625 0.37 +0.8 3,885,510 + AO353_17625 0.37 +0.1 3,885,510 + AO353_17625 0.37 +0.0 3,885,510 + AO353_17625 0.37 -0.2 3,885,511 - AO353_17625 0.37 -0.1 3,885,512 + AO353_17625 0.37 +0.2 3,885,512 + AO353_17625 0.37 -0.7 3,885,513 - AO353_17625 0.37 -0.9 3,885,552 + AO353_17625 0.44 -0.8 3,885,552 + AO353_17625 0.44 -0.2 3,885,552 + AO353_17625 0.44 +1.0 3,885,553 - AO353_17625 0.44 +0.8 3,885,553 - AO353_17625 0.44 +1.9 3,885,615 + AO353_17625 0.55 +1.5 3,885,615 + AO353_17625 0.55 +0.0 3,885,615 + AO353_17625 0.55 +1.4 3,885,615 + AO353_17625 0.55 -0.3 3,885,616 - AO353_17625 0.55 -0.2 3,885,616 - AO353_17625 0.55 -0.8 3,885,616 - AO353_17625 0.55 -0.8 3,885,616 - AO353_17625 0.55 +0.4 3,885,616 - AO353_17625 0.55 +0.2 3,885,616 - AO353_17625 0.55 -1.5 3,885,724 + AO353_17625 0.73 -0.2 3,885,724 + AO353_17625 0.73 -0.5 3,885,724 + AO353_17625 0.73 -0.5 3,885,728 + AO353_17625 0.74 -2.2 3,885,728 + AO353_17625 0.74 -0.7 3,885,729 - AO353_17625 0.74 -1.5 3,885,737 - AO353_17625 0.76 +3.6 3,885,742 + AO353_17625 0.76 +0.8 3,885,766 - AO353_17625 0.81 +1.5 3,885,804 - AO353_17625 0.87 -0.6 3,886,222 + AO353_17630 0.53 -1.4 3,886,222 + AO353_17630 0.53 -0.8 3,886,466 - +0.8 3,886,466 - -0.2 3,886,466 - +0.5 3,886,466 - -1.1 3,886,466 - -0.6 3,886,522 + +1.2 3,886,523 - -0.9 3,886,523 - -1.5 3,886,523 - -0.6 3,886,526 + -1.5 3,886,526 + +2.4 3,886,526 + -1.2 3,886,526 + +1.8 3,886,526 + -1.0 3,886,526 + -2.4 3,886,526 + -1.4 3,886,527 - -1.2 3,886,527 - +0.1 3,886,564 - +0.1 3,886,564 - +0.5 3,886,649 + AO353_17635 0.15 -0.5 3,886,650 - AO353_17635 0.15 -0.2 3,886,650 - AO353_17635 0.15 -1.5 3,886,655 + AO353_17635 0.16 -1.2 3,886,656 - AO353_17635 0.16 +0.5 3,886,714 + AO353_17635 0.22 +0.1 3,886,714 + AO353_17635 0.22 +0.2 3,886,715 - AO353_17635 0.22 -0.2 3,886,747 + AO353_17635 0.25 +0.1 3,886,763 + AO353_17635 0.27 -1.0 3,886,763 + AO353_17635 0.27 -0.6 3,886,763 + AO353_17635 0.27 -0.5 3,886,764 - AO353_17635 0.27 +0.2 3,886,764 - AO353_17635 0.27 -0.5 3,886,805 + AO353_17635 0.31 +1.4 3,886,805 + AO353_17635 0.31 -0.5 3,886,806 - AO353_17635 0.31 -1.4 3,886,858 - AO353_17635 0.37 +0.3 3,886,858 - AO353_17635 0.37 -0.2 3,886,858 - AO353_17635 0.37 +0.0 3,887,149 + AO353_17635 0.67 -0.3 3,887,149 + AO353_17635 0.67 -0.2 3,887,149 + AO353_17635 0.67 -1.5 3,887,150 - AO353_17635 0.67 +1.0 3,887,189 + AO353_17635 0.71 +1.5 3,887,190 - AO353_17635 0.71 -0.6 3,887,190 - AO353_17635 0.71 +1.8 3,887,195 + AO353_17635 0.72 +1.0 3,887,196 - AO353_17635 0.72 -1.2 3,887,244 + AO353_17635 0.77 -1.8 3,887,244 + AO353_17635 0.77 -0.8 3,887,244 + AO353_17635 0.77 +1.1 3,887,244 + AO353_17635 0.77 -1.3 3,887,244 + AO353_17635 0.77 -1.8 3,887,244 + AO353_17635 0.77 -0.8 3,887,244 + AO353_17635 0.77 -0.3 3,887,244 + AO353_17635 0.77 -0.9 3,887,244 + AO353_17635 0.77 -1.4 3,887,244 + AO353_17635 0.77 +1.8 3,887,244 + AO353_17635 0.77 -2.3 3,887,244 + AO353_17635 0.77 -0.6 3,887,245 - AO353_17635 0.77 +0.0 3,887,245 - AO353_17635 0.77 -0.2 3,887,245 - AO353_17635 0.77 -0.2 3,887,245 - AO353_17635 0.77 +0.4 3,887,245 - AO353_17635 0.77 -0.6 3,887,245 - AO353_17635 0.77 +0.1 3,887,245 - AO353_17635 0.77 +0.2 3,887,245 - AO353_17635 0.77 -0.8 3,887,316 - AO353_17635 0.84 -1.4 3,887,316 - AO353_17635 0.84 +1.8 3,887,323 + AO353_17635 0.85 -1.2 3,887,386 + -0.2 3,887,386 + +0.1 3,887,387 - -0.2 3,887,444 + +0.4 3,887,444 + +0.1 3,887,445 - -0.5 3,887,592 + +0.3 3,887,592 + +0.5 3,887,594 + +0.4 3,887,594 + -0.4 3,887,594 + -1.8 3,887,653 + +2.0 3,887,653 + -0.6 3,887,653 + +0.2 3,887,653 + +1.2 3,887,653 + +0.6 3,887,653 + -0.8 3,887,653 + +0.4 3,887,665 + -0.6 3,888,038 + -0.8
Or see this region's nucleotide sequence