Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16585

Experiment: Furfuryl Alcohol 0.125 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_16580 and AO353_16585 are separated by 8 nucleotidesAO353_16585 and AO353_16590 are separated by 42 nucleotidesAO353_16590 and AO353_16595 overlap by 4 nucleotides AO353_16580: AO353_16580 - S-(hydroxymethyl)glutathione dehydrogenase, at 3,683,794 to 3,684,906 _16580 AO353_16585: AO353_16585 - S-formylglutathione hydrolase, at 3,684,915 to 3,685,760 _16585 AO353_16590: AO353_16590 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 3,685,803 to 3,686,276 _16590 AO353_16595: AO353_16595 - pseudouridine synthase, at 3,686,273 to 3,687,331 _16595 Position (kb) 3684 3685 3686Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3683.929 kb on + strand, within AO353_16580at 3683.929 kb on + strand, within AO353_16580at 3683.930 kb on - strand, within AO353_16580at 3683.930 kb on - strand, within AO353_16580at 3683.930 kb on - strand, within AO353_16580at 3683.930 kb on - strand, within AO353_16580at 3683.930 kb on - strand, within AO353_16580at 3683.930 kb on - strand, within AO353_16580at 3683.958 kb on + strand, within AO353_16580at 3683.958 kb on + strand, within AO353_16580at 3683.958 kb on + strand, within AO353_16580at 3683.958 kb on + strand, within AO353_16580at 3683.959 kb on - strand, within AO353_16580at 3683.959 kb on - strand, within AO353_16580at 3683.959 kb on - strand, within AO353_16580at 3683.959 kb on - strand, within AO353_16580at 3684.058 kb on + strand, within AO353_16580at 3684.058 kb on + strand, within AO353_16580at 3684.058 kb on + strand, within AO353_16580at 3684.058 kb on + strand, within AO353_16580at 3684.058 kb on + strand, within AO353_16580at 3684.059 kb on - strand, within AO353_16580at 3684.059 kb on - strand, within AO353_16580at 3684.175 kb on + strand, within AO353_16580at 3684.175 kb on + strand, within AO353_16580at 3684.176 kb on - strand, within AO353_16580at 3684.199 kb on + strand, within AO353_16580at 3684.199 kb on + strand, within AO353_16580at 3684.199 kb on + strandat 3684.199 kb on + strand, within AO353_16580at 3684.199 kb on + strand, within AO353_16580at 3684.199 kb on + strand, within AO353_16580at 3684.200 kb on - strand, within AO353_16580at 3684.200 kb on - strand, within AO353_16580at 3684.200 kb on - strand, within AO353_16580at 3684.200 kb on - strand, within AO353_16580at 3684.200 kb on - strand, within AO353_16580at 3684.200 kb on - strand, within AO353_16580at 3684.200 kb on - strand, within AO353_16580at 3684.200 kb on - strand, within AO353_16580at 3684.207 kb on + strand, within AO353_16580at 3684.207 kb on + strand, within AO353_16580at 3684.207 kb on + strand, within AO353_16580at 3684.207 kb on + strand, within AO353_16580at 3684.208 kb on - strand, within AO353_16580at 3684.226 kb on + strand, within AO353_16580at 3684.226 kb on + strand, within AO353_16580at 3684.226 kb on + strand, within AO353_16580at 3684.264 kb on + strand, within AO353_16580at 3684.438 kb on + strand, within AO353_16580at 3684.438 kb on + strand, within AO353_16580at 3684.439 kb on - strand, within AO353_16580at 3684.439 kb on - strand, within AO353_16580at 3684.596 kb on + strand, within AO353_16580at 3684.596 kb on + strand, within AO353_16580at 3684.596 kb on + strand, within AO353_16580at 3684.596 kb on + strand, within AO353_16580at 3684.596 kb on + strand, within AO353_16580at 3684.596 kb on + strand, within AO353_16580at 3684.596 kb on + strand, within AO353_16580at 3684.596 kb on + strand, within AO353_16580at 3684.596 kb on + strand, within AO353_16580at 3684.596 kb on + strand, within AO353_16580at 3684.596 kb on + strand, within AO353_16580at 3684.597 kb on - strand, within AO353_16580at 3684.597 kb on - strand, within AO353_16580at 3684.597 kb on - strand, within AO353_16580at 3684.597 kb on - strand, within AO353_16580at 3684.597 kb on - strand, within AO353_16580at 3684.597 kb on - strand, within AO353_16580at 3684.597 kb on - strand, within AO353_16580at 3684.597 kb on - strand, within AO353_16580at 3684.597 kb on - strand, within AO353_16580at 3684.772 kb on + strand, within AO353_16580at 3684.772 kb on + strand, within AO353_16580at 3684.772 kb on + strand, within AO353_16580at 3684.772 kb on + strand, within AO353_16580at 3684.772 kb on + strand, within AO353_16580at 3684.773 kb on - strand, within AO353_16580at 3684.773 kb on - strand, within AO353_16580at 3684.816 kb on + strandat 3684.816 kb on + strandat 3684.816 kb on + strandat 3684.817 kb on - strandat 3684.962 kb on + strandat 3684.963 kb on - strandat 3684.969 kb on + strandat 3684.969 kb on + strandat 3684.969 kb on + strandat 3684.969 kb on + strandat 3684.969 kb on + strandat 3684.970 kb on - strandat 3684.970 kb on - strandat 3684.970 kb on - strandat 3685.017 kb on + strand, within AO353_16585at 3685.017 kb on + strand, within AO353_16585at 3685.017 kb on + strand, within AO353_16585at 3685.017 kb on + strand, within AO353_16585at 3685.018 kb on - strand, within AO353_16585at 3685.018 kb on - strand, within AO353_16585at 3685.018 kb on - strand, within AO353_16585at 3685.018 kb on - strand, within AO353_16585at 3685.062 kb on + strand, within AO353_16585at 3685.062 kb on + strand, within AO353_16585at 3685.062 kb on + strand, within AO353_16585at 3685.062 kb on + strand, within AO353_16585at 3685.062 kb on + strand, within AO353_16585at 3685.063 kb on - strand, within AO353_16585at 3685.063 kb on - strand, within AO353_16585at 3685.063 kb on - strand, within AO353_16585at 3685.063 kb on - strand, within AO353_16585at 3685.166 kb on + strand, within AO353_16585at 3685.166 kb on + strand, within AO353_16585at 3685.167 kb on - strand, within AO353_16585at 3685.167 kb on - strand, within AO353_16585at 3685.236 kb on + strand, within AO353_16585at 3685.237 kb on - strand, within AO353_16585at 3685.287 kb on + strand, within AO353_16585at 3685.287 kb on + strand, within AO353_16585at 3685.287 kb on + strand, within AO353_16585at 3685.287 kb on + strand, within AO353_16585at 3685.287 kb on + strand, within AO353_16585at 3685.287 kb on + strand, within AO353_16585at 3685.287 kb on + strand, within AO353_16585at 3685.287 kb on + strand, within AO353_16585at 3685.287 kb on + strand, within AO353_16585at 3685.287 kb on + strand, within AO353_16585at 3685.287 kb on + strand, within AO353_16585at 3685.287 kb on + strand, within AO353_16585at 3685.287 kb on + strand, within AO353_16585at 3685.287 kb on + strand, within AO353_16585at 3685.288 kb on - strand, within AO353_16585at 3685.288 kb on - strand, within AO353_16585at 3685.288 kb on - strand, within AO353_16585at 3685.288 kb on - strand, within AO353_16585at 3685.288 kb on - strand, within AO353_16585at 3685.288 kb on - strand, within AO353_16585at 3685.288 kb on - strand, within AO353_16585at 3685.288 kb on - strand, within AO353_16585at 3685.288 kb on - strand, within AO353_16585at 3685.288 kb on - strand, within AO353_16585at 3685.288 kb on - strand, within AO353_16585at 3685.288 kb on - strand, within AO353_16585at 3685.288 kb on - strand, within AO353_16585at 3685.288 kb on - strand, within AO353_16585at 3685.288 kb on - strand, within AO353_16585at 3685.288 kb on - strand, within AO353_16585at 3685.288 kb on - strand, within AO353_16585at 3685.288 kb on - strand, within AO353_16585at 3685.288 kb on - strand, within AO353_16585at 3685.288 kb on - strand, within AO353_16585at 3685.488 kb on + strand, within AO353_16585at 3685.683 kb on + strandat 3685.695 kb on + strandat 3685.696 kb on - strandat 3685.696 kb on - strandat 3685.696 kb on - strandat 3685.696 kb on - strandat 3685.696 kb on - strandat 3685.696 kb on - strandat 3685.715 kb on + strandat 3685.715 kb on + strandat 3685.716 kb on - strandat 3685.716 kb on - strandat 3685.750 kb on + strandat 3685.751 kb on - strandat 3685.751 kb on - strandat 3685.759 kb on - strandat 3685.767 kb on + strandat 3685.767 kb on + strandat 3685.768 kb on - strandat 3685.768 kb on - strandat 3685.768 kb on - strandat 3686.306 kb on + strandat 3686.498 kb on + strand, within AO353_16595at 3686.498 kb on + strand, within AO353_16595at 3686.499 kb on - strand, within AO353_16595at 3686.499 kb on - strand, within AO353_16595at 3686.499 kb on - strand, within AO353_16595at 3686.499 kb on - strand, within AO353_16595at 3686.626 kb on + strand, within AO353_16595at 3686.668 kb on + strand, within AO353_16595at 3686.668 kb on + strand, within AO353_16595at 3686.669 kb on - strand, within AO353_16595at 3686.669 kb on - strand, within AO353_16595at 3686.669 kb on - strand, within AO353_16595at 3686.669 kb on - strand, within AO353_16595at 3686.669 kb on - strand, within AO353_16595at 3686.753 kb on + strand, within AO353_16595at 3686.753 kb on + strand, within AO353_16595at 3686.753 kb on + strand, within AO353_16595at 3686.753 kb on + strand, within AO353_16595at 3686.753 kb on + strand, within AO353_16595at 3686.754 kb on - strand, within AO353_16595at 3686.754 kb on - strand, within AO353_16595

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Per-strain Table

Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.125 vol%
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3,683,929 + AO353_16580 0.12 -2.0
3,683,929 + AO353_16580 0.12 -0.1
3,683,930 - AO353_16580 0.12 +0.6
3,683,930 - AO353_16580 0.12 -1.1
3,683,930 - AO353_16580 0.12 +0.6
3,683,930 - AO353_16580 0.12 -1.0
3,683,930 - AO353_16580 0.12 -0.4
3,683,930 - AO353_16580 0.12 -0.3
3,683,958 + AO353_16580 0.15 -1.0
3,683,958 + AO353_16580 0.15 -0.9
3,683,958 + AO353_16580 0.15 -0.3
3,683,958 + AO353_16580 0.15 -0.4
3,683,959 - AO353_16580 0.15 -0.7
3,683,959 - AO353_16580 0.15 +0.9
3,683,959 - AO353_16580 0.15 +0.1
3,683,959 - AO353_16580 0.15 -1.7
3,684,058 + AO353_16580 0.24 -0.3
3,684,058 + AO353_16580 0.24 -0.3
3,684,058 + AO353_16580 0.24 -2.9
3,684,058 + AO353_16580 0.24 -0.8
3,684,058 + AO353_16580 0.24 +0.3
3,684,059 - AO353_16580 0.24 -1.3
3,684,059 - AO353_16580 0.24 -0.1
3,684,175 + AO353_16580 0.34 -0.4
3,684,175 + AO353_16580 0.34 +1.4
3,684,176 - AO353_16580 0.34 -0.6
3,684,199 + AO353_16580 0.36 +0.1
3,684,199 + AO353_16580 0.36 -0.7
3,684,199 + -0.1
3,684,199 + AO353_16580 0.36 -0.5
3,684,199 + AO353_16580 0.36 -0.2
3,684,199 + AO353_16580 0.36 -1.9
3,684,200 - AO353_16580 0.36 -0.7
3,684,200 - AO353_16580 0.36 -0.2
3,684,200 - AO353_16580 0.36 -0.9
3,684,200 - AO353_16580 0.36 -1.9
3,684,200 - AO353_16580 0.36 -0.1
3,684,200 - AO353_16580 0.36 -0.1
3,684,200 - AO353_16580 0.36 +0.0
3,684,200 - AO353_16580 0.36 -1.1
3,684,207 + AO353_16580 0.37 -1.1
3,684,207 + AO353_16580 0.37 -0.2
3,684,207 + AO353_16580 0.37 -0.3
3,684,207 + AO353_16580 0.37 +0.9
3,684,208 - AO353_16580 0.37 +1.5
3,684,226 + AO353_16580 0.39 -0.4
3,684,226 + AO353_16580 0.39 +0.1
3,684,226 + AO353_16580 0.39 +1.3
3,684,264 + AO353_16580 0.42 -0.4
3,684,438 + AO353_16580 0.58 +0.5
3,684,438 + AO353_16580 0.58 -0.3
3,684,439 - AO353_16580 0.58 -0.7
3,684,439 - AO353_16580 0.58 -1.4
3,684,596 + AO353_16580 0.72 +0.2
3,684,596 + AO353_16580 0.72 +0.9
3,684,596 + AO353_16580 0.72 -0.4
3,684,596 + AO353_16580 0.72 +0.7
3,684,596 + AO353_16580 0.72 -1.2
3,684,596 + AO353_16580 0.72 -1.3
3,684,596 + AO353_16580 0.72 +0.3
3,684,596 + AO353_16580 0.72 -1.1
3,684,596 + AO353_16580 0.72 +0.4
3,684,596 + AO353_16580 0.72 -0.1
3,684,596 + AO353_16580 0.72 -0.9
3,684,597 - AO353_16580 0.72 -0.7
3,684,597 - AO353_16580 0.72 -0.7
3,684,597 - AO353_16580 0.72 -0.1
3,684,597 - AO353_16580 0.72 -0.5
3,684,597 - AO353_16580 0.72 -0.9
3,684,597 - AO353_16580 0.72 -1.0
3,684,597 - AO353_16580 0.72 +0.1
3,684,597 - AO353_16580 0.72 -1.7
3,684,597 - AO353_16580 0.72 -1.6
3,684,772 + AO353_16580 0.88 +0.3
3,684,772 + AO353_16580 0.88 -0.6
3,684,772 + AO353_16580 0.88 +3.2
3,684,772 + AO353_16580 0.88 -0.1
3,684,772 + AO353_16580 0.88 +0.9
3,684,773 - AO353_16580 0.88 +0.3
3,684,773 - AO353_16580 0.88 -0.1
3,684,816 + +0.3
3,684,816 + -0.5
3,684,816 + -0.9
3,684,817 - -0.6
3,684,962 + +0.2
3,684,963 - -1.2
3,684,969 + +0.6
3,684,969 + -0.1
3,684,969 + +0.1
3,684,969 + +1.5
3,684,969 + -2.7
3,684,970 - -0.7
3,684,970 - +0.2
3,684,970 - +0.9
3,685,017 + AO353_16585 0.12 -0.4
3,685,017 + AO353_16585 0.12 -1.8
3,685,017 + AO353_16585 0.12 -0.4
3,685,017 + AO353_16585 0.12 -1.7
3,685,018 - AO353_16585 0.12 +0.3
3,685,018 - AO353_16585 0.12 -1.3
3,685,018 - AO353_16585 0.12 -1.4
3,685,018 - AO353_16585 0.12 -0.7
3,685,062 + AO353_16585 0.17 +0.1
3,685,062 + AO353_16585 0.17 -1.5
3,685,062 + AO353_16585 0.17 +0.1
3,685,062 + AO353_16585 0.17 -0.1
3,685,062 + AO353_16585 0.17 +0.7
3,685,063 - AO353_16585 0.17 +0.1
3,685,063 - AO353_16585 0.17 +0.9
3,685,063 - AO353_16585 0.17 -1.7
3,685,063 - AO353_16585 0.17 -0.8
3,685,166 + AO353_16585 0.30 -0.3
3,685,166 + AO353_16585 0.30 +0.0
3,685,167 - AO353_16585 0.30 -1.1
3,685,167 - AO353_16585 0.30 -2.2
3,685,236 + AO353_16585 0.38 +0.1
3,685,237 - AO353_16585 0.38 -0.6
3,685,287 + AO353_16585 0.44 -1.9
3,685,287 + AO353_16585 0.44 -1.4
3,685,287 + AO353_16585 0.44 -0.1
3,685,287 + AO353_16585 0.44 +0.9
3,685,287 + AO353_16585 0.44 -1.6
3,685,287 + AO353_16585 0.44 -1.2
3,685,287 + AO353_16585 0.44 -0.3
3,685,287 + AO353_16585 0.44 +1.5
3,685,287 + AO353_16585 0.44 +0.5
3,685,287 + AO353_16585 0.44 +1.2
3,685,287 + AO353_16585 0.44 -0.2
3,685,287 + AO353_16585 0.44 +0.6
3,685,287 + AO353_16585 0.44 -0.7
3,685,287 + AO353_16585 0.44 -0.5
3,685,288 - AO353_16585 0.44 -0.1
3,685,288 - AO353_16585 0.44 -1.2
3,685,288 - AO353_16585 0.44 -0.8
3,685,288 - AO353_16585 0.44 -0.7
3,685,288 - AO353_16585 0.44 -0.4
3,685,288 - AO353_16585 0.44 +0.9
3,685,288 - AO353_16585 0.44 +0.6
3,685,288 - AO353_16585 0.44 +0.1
3,685,288 - AO353_16585 0.44 -2.0
3,685,288 - AO353_16585 0.44 -0.4
3,685,288 - AO353_16585 0.44 -0.7
3,685,288 - AO353_16585 0.44 -0.7
3,685,288 - AO353_16585 0.44 -1.2
3,685,288 - AO353_16585 0.44 +0.2
3,685,288 - AO353_16585 0.44 -0.9
3,685,288 - AO353_16585 0.44 -1.4
3,685,288 - AO353_16585 0.44 -1.1
3,685,288 - AO353_16585 0.44 -1.7
3,685,288 - AO353_16585 0.44 -1.3
3,685,288 - AO353_16585 0.44 -0.1
3,685,488 + AO353_16585 0.68 -0.2
3,685,683 + -0.3
3,685,695 + -0.1
3,685,696 - +0.1
3,685,696 - -2.4
3,685,696 - -1.2
3,685,696 - -1.2
3,685,696 - +0.4
3,685,696 - -0.5
3,685,715 + +0.9
3,685,715 + -1.0
3,685,716 - -0.5
3,685,716 - -0.1
3,685,750 + -2.4
3,685,751 - +0.1
3,685,751 - -0.9
3,685,759 - +0.7
3,685,767 + -1.4
3,685,767 + +1.3
3,685,768 - -0.1
3,685,768 - -0.3
3,685,768 - +0.1
3,686,306 + -0.7
3,686,498 + AO353_16595 0.21 -1.4
3,686,498 + AO353_16595 0.21 +0.4
3,686,499 - AO353_16595 0.21 +0.4
3,686,499 - AO353_16595 0.21 +0.4
3,686,499 - AO353_16595 0.21 -2.0
3,686,499 - AO353_16595 0.21 -1.1
3,686,626 + AO353_16595 0.33 +0.7
3,686,668 + AO353_16595 0.37 +0.6
3,686,668 + AO353_16595 0.37 -1.8
3,686,669 - AO353_16595 0.37 +1.3
3,686,669 - AO353_16595 0.37 +1.2
3,686,669 - AO353_16595 0.37 -0.1
3,686,669 - AO353_16595 0.37 -0.1
3,686,669 - AO353_16595 0.37 -0.4
3,686,753 + AO353_16595 0.45 +0.5
3,686,753 + AO353_16595 0.45 +0.4
3,686,753 + AO353_16595 0.45 -0.7
3,686,753 + AO353_16595 0.45 +0.3
3,686,753 + AO353_16595 0.45 +0.4
3,686,754 - AO353_16595 0.45 +1.2
3,686,754 - AO353_16595 0.45 -1.1

Or see this region's nucleotide sequence