Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16385

Experiment: Furfuryl Alcohol 0.125 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_16380 and AO353_16385 are separated by 31 nucleotidesAO353_16385 and AO353_16390 are separated by 51 nucleotides AO353_16380: AO353_16380 - hypothetical protein, at 3,636,481 to 3,637,170 _16380 AO353_16385: AO353_16385 - hypothetical protein, at 3,637,202 to 3,637,600 _16385 AO353_16390: AO353_16390 - glycerol-3-phosphate O-acyltransferase, at 3,637,652 to 3,640,156 _16390 Position (kb) 3637 3638Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3636.203 kb on + strandat 3636.212 kb on + strandat 3636.236 kb on + strandat 3636.236 kb on + strandat 3636.237 kb on - strandat 3636.237 kb on - strandat 3636.355 kb on + strandat 3636.377 kb on + strandat 3636.378 kb on - strandat 3636.412 kb on + strandat 3636.412 kb on + strandat 3636.412 kb on + strandat 3636.412 kb on + strandat 3636.412 kb on + strandat 3636.412 kb on + strandat 3636.412 kb on + strandat 3636.413 kb on - strandat 3636.413 kb on - strandat 3636.421 kb on + strandat 3636.421 kb on + strandat 3636.438 kb on + strandat 3636.438 kb on + strandat 3636.439 kb on - strandat 3636.439 kb on - strandat 3636.439 kb on - strandat 3636.439 kb on - strandat 3636.439 kb on - strandat 3636.439 kb on - strandat 3636.482 kb on + strandat 3636.483 kb on - strandat 3636.483 kb on - strandat 3636.483 kb on - strandat 3636.602 kb on + strand, within AO353_16380at 3636.602 kb on + strand, within AO353_16380at 3636.603 kb on - strand, within AO353_16380at 3636.603 kb on - strand, within AO353_16380at 3636.671 kb on + strand, within AO353_16380at 3636.671 kb on + strand, within AO353_16380at 3636.671 kb on + strand, within AO353_16380at 3636.671 kb on + strand, within AO353_16380at 3636.672 kb on - strand, within AO353_16380at 3636.672 kb on - strand, within AO353_16380at 3636.672 kb on - strand, within AO353_16380at 3636.761 kb on + strand, within AO353_16380at 3636.780 kb on + strand, within AO353_16380at 3637.153 kb on + strandat 3637.153 kb on + strandat 3637.153 kb on + strandat 3637.154 kb on - strandat 3637.154 kb on - strandat 3637.154 kb on - strandat 3637.183 kb on + strandat 3637.184 kb on - strandat 3637.196 kb on + strandat 3637.267 kb on + strand, within AO353_16385at 3637.267 kb on + strand, within AO353_16385at 3637.268 kb on - strand, within AO353_16385at 3637.359 kb on + strand, within AO353_16385at 3637.359 kb on + strand, within AO353_16385at 3637.359 kb on + strand, within AO353_16385at 3637.359 kb on + strand, within AO353_16385at 3637.359 kb on + strand, within AO353_16385at 3637.360 kb on - strand, within AO353_16385at 3637.360 kb on - strand, within AO353_16385at 3637.445 kb on + strand, within AO353_16385at 3637.504 kb on - strand, within AO353_16385at 3637.531 kb on + strand, within AO353_16385at 3637.532 kb on - strand, within AO353_16385at 3637.532 kb on - strand, within AO353_16385at 3637.645 kb on - strandat 3637.645 kb on - strandat 3637.645 kb on - strandat 3637.648 kb on + strandat 3637.648 kb on + strandat 3637.648 kb on + strandat 3637.648 kb on + strandat 3637.648 kb on + strandat 3637.649 kb on - strandat 3637.649 kb on - strandat 3637.649 kb on - strandat 3637.649 kb on - strandat 3637.649 kb on - strandat 3637.649 kb on - strandat 3637.649 kb on - strandat 3638.004 kb on + strand, within AO353_16390at 3638.004 kb on + strand, within AO353_16390at 3638.004 kb on + strand, within AO353_16390at 3638.004 kb on + strand, within AO353_16390at 3638.004 kb on + strand, within AO353_16390at 3638.004 kb on + strand, within AO353_16390at 3638.004 kb on + strand, within AO353_16390at 3638.005 kb on - strand, within AO353_16390at 3638.005 kb on - strand, within AO353_16390at 3638.005 kb on - strand, within AO353_16390at 3638.005 kb on - strand, within AO353_16390at 3638.005 kb on - strand, within AO353_16390at 3638.005 kb on - strand, within AO353_16390at 3638.005 kb on - strand, within AO353_16390at 3638.088 kb on + strand, within AO353_16390at 3638.088 kb on + strand, within AO353_16390at 3638.088 kb on + strand, within AO353_16390at 3638.088 kb on + strand, within AO353_16390at 3638.088 kb on + strand, within AO353_16390at 3638.089 kb on - strand, within AO353_16390at 3638.089 kb on - strand, within AO353_16390at 3638.202 kb on + strand, within AO353_16390at 3638.203 kb on - strand, within AO353_16390at 3638.209 kb on - strand, within AO353_16390at 3638.224 kb on - strand, within AO353_16390at 3638.322 kb on + strand, within AO353_16390at 3638.322 kb on + strand, within AO353_16390at 3638.322 kb on + strand, within AO353_16390at 3638.322 kb on + strand, within AO353_16390at 3638.322 kb on + strand, within AO353_16390at 3638.322 kb on + strand, within AO353_16390at 3638.322 kb on + strand, within AO353_16390at 3638.322 kb on + strand, within AO353_16390at 3638.322 kb on + strand, within AO353_16390at 3638.323 kb on - strand, within AO353_16390at 3638.323 kb on - strand, within AO353_16390at 3638.323 kb on - strand, within AO353_16390at 3638.323 kb on - strand, within AO353_16390at 3638.323 kb on - strand, within AO353_16390at 3638.323 kb on - strand, within AO353_16390at 3638.323 kb on - strand, within AO353_16390at 3638.323 kb on - strand, within AO353_16390at 3638.356 kb on - strand, within AO353_16390at 3638.463 kb on + strand, within AO353_16390at 3638.463 kb on + strand, within AO353_16390at 3638.464 kb on - strand, within AO353_16390at 3638.490 kb on + strand, within AO353_16390at 3638.490 kb on + strand, within AO353_16390at 3638.490 kb on + strand, within AO353_16390

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Per-strain Table

Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.125 vol%
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3,636,203 + +0.0
3,636,212 + +0.7
3,636,236 + -0.2
3,636,236 + +2.7
3,636,237 - -0.5
3,636,237 - -1.4
3,636,355 + +0.9
3,636,377 + +0.3
3,636,378 - -0.4
3,636,412 + +0.2
3,636,412 + -1.4
3,636,412 + +1.1
3,636,412 + +0.9
3,636,412 + -0.9
3,636,412 + -0.1
3,636,412 + +0.2
3,636,413 - -0.7
3,636,413 - +0.5
3,636,421 + +0.5
3,636,421 + -1.7
3,636,438 + +0.2
3,636,438 + +0.4
3,636,439 - -0.1
3,636,439 - +0.3
3,636,439 - +0.5
3,636,439 - +0.0
3,636,439 - +0.1
3,636,439 - +1.6
3,636,482 + -0.4
3,636,483 - -0.3
3,636,483 - -1.3
3,636,483 - +0.5
3,636,602 + AO353_16380 0.18 -1.1
3,636,602 + AO353_16380 0.18 -1.0
3,636,603 - AO353_16380 0.18 -0.7
3,636,603 - AO353_16380 0.18 +1.5
3,636,671 + AO353_16380 0.28 -2.0
3,636,671 + AO353_16380 0.28 +1.6
3,636,671 + AO353_16380 0.28 -1.3
3,636,671 + AO353_16380 0.28 -1.4
3,636,672 - AO353_16380 0.28 +0.2
3,636,672 - AO353_16380 0.28 -0.3
3,636,672 - AO353_16380 0.28 +1.4
3,636,761 + AO353_16380 0.41 -0.1
3,636,780 + AO353_16380 0.43 -0.7
3,637,153 + +0.3
3,637,153 + -1.9
3,637,153 + +0.6
3,637,154 - +0.6
3,637,154 - +0.7
3,637,154 - +0.7
3,637,183 + -0.5
3,637,184 - +0.9
3,637,196 + -0.2
3,637,267 + AO353_16385 0.16 +0.2
3,637,267 + AO353_16385 0.16 -2.8
3,637,268 - AO353_16385 0.17 +0.2
3,637,359 + AO353_16385 0.39 +0.2
3,637,359 + AO353_16385 0.39 -2.3
3,637,359 + AO353_16385 0.39 -0.7
3,637,359 + AO353_16385 0.39 -0.6
3,637,359 + AO353_16385 0.39 +0.2
3,637,360 - AO353_16385 0.40 -2.3
3,637,360 - AO353_16385 0.40 -0.8
3,637,445 + AO353_16385 0.61 -0.7
3,637,504 - AO353_16385 0.76 +1.3
3,637,531 + AO353_16385 0.82 -0.1
3,637,532 - AO353_16385 0.83 -0.9
3,637,532 - AO353_16385 0.83 +0.4
3,637,645 - -0.7
3,637,645 - -0.8
3,637,645 - +0.9
3,637,648 + -0.9
3,637,648 + -0.6
3,637,648 + +0.9
3,637,648 + -0.1
3,637,648 + -1.4
3,637,649 - -0.9
3,637,649 - +0.1
3,637,649 - -0.1
3,637,649 - +1.9
3,637,649 - +0.3
3,637,649 - +0.2
3,637,649 - -1.4
3,638,004 + AO353_16390 0.14 +0.1
3,638,004 + AO353_16390 0.14 +1.9
3,638,004 + AO353_16390 0.14 +0.3
3,638,004 + AO353_16390 0.14 +0.3
3,638,004 + AO353_16390 0.14 -0.1
3,638,004 + AO353_16390 0.14 +0.9
3,638,004 + AO353_16390 0.14 +1.7
3,638,005 - AO353_16390 0.14 -0.3
3,638,005 - AO353_16390 0.14 +0.4
3,638,005 - AO353_16390 0.14 -0.1
3,638,005 - AO353_16390 0.14 -2.3
3,638,005 - AO353_16390 0.14 -0.4
3,638,005 - AO353_16390 0.14 +0.3
3,638,005 - AO353_16390 0.14 +0.0
3,638,088 + AO353_16390 0.17 -1.4
3,638,088 + AO353_16390 0.17 +0.9
3,638,088 + AO353_16390 0.17 +0.6
3,638,088 + AO353_16390 0.17 -1.3
3,638,088 + AO353_16390 0.17 -0.1
3,638,089 - AO353_16390 0.17 -0.8
3,638,089 - AO353_16390 0.17 +0.3
3,638,202 + AO353_16390 0.22 +0.9
3,638,203 - AO353_16390 0.22 +0.4
3,638,209 - AO353_16390 0.22 +0.6
3,638,224 - AO353_16390 0.23 +0.1
3,638,322 + AO353_16390 0.27 +3.1
3,638,322 + AO353_16390 0.27 +1.5
3,638,322 + AO353_16390 0.27 -0.2
3,638,322 + AO353_16390 0.27 -0.4
3,638,322 + AO353_16390 0.27 -1.2
3,638,322 + AO353_16390 0.27 +0.0
3,638,322 + AO353_16390 0.27 +0.4
3,638,322 + AO353_16390 0.27 -1.3
3,638,322 + AO353_16390 0.27 -0.3
3,638,323 - AO353_16390 0.27 +1.1
3,638,323 - AO353_16390 0.27 -0.7
3,638,323 - AO353_16390 0.27 +1.4
3,638,323 - AO353_16390 0.27 -1.7
3,638,323 - AO353_16390 0.27 -1.4
3,638,323 - AO353_16390 0.27 +1.9
3,638,323 - AO353_16390 0.27 -0.9
3,638,323 - AO353_16390 0.27 -0.3
3,638,356 - AO353_16390 0.28 -1.0
3,638,463 + AO353_16390 0.32 +0.3
3,638,463 + AO353_16390 0.32 +1.9
3,638,464 - AO353_16390 0.32 +1.3
3,638,490 + AO353_16390 0.33 +0.4
3,638,490 + AO353_16390 0.33 -1.4
3,638,490 + AO353_16390 0.33 +0.5

Or see this region's nucleotide sequence