Experiment: Furfuryl Alcohol 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_09800 and AO353_09805 are separated by 3 nucleotides AO353_09805 and AO353_09810 are separated by 105 nucleotides AO353_09810 and AO353_09815 are separated by 75 nucleotides AO353_09815 and AO353_09820 are separated by 67 nucleotides AO353_09820 and AO353_09825 are separated by 85 nucleotides
AO353_09800: AO353_09800 - hypothetical protein, at 2,144,731 to 2,144,952
_09800
AO353_09805: AO353_09805 - hypothetical protein, at 2,144,956 to 2,145,243
_09805
AO353_09810: AO353_09810 - hypothetical protein, at 2,145,349 to 2,145,795
_09810
AO353_09815: AO353_09815 - hypothetical protein, at 2,145,871 to 2,146,305
_09815
AO353_09820: AO353_09820 - hypothetical protein, at 2,146,373 to 2,146,852
_09820
AO353_09825: AO353_09825 - integration host factor, at 2,146,938 to 2,147,213
_09825
Position (kb)
2145
2146
2147 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2144.892 kb on - strand, within AO353_09800 at 2145.241 kb on + strand at 2145.279 kb on - strand at 2145.469 kb on + strand, within AO353_09810 at 2145.584 kb on - strand, within AO353_09810 at 2145.612 kb on - strand, within AO353_09810 at 2145.612 kb on - strand, within AO353_09810 at 2145.612 kb on - strand, within AO353_09810 at 2145.612 kb on - strand, within AO353_09810 at 2145.646 kb on - strand, within AO353_09810 at 2145.648 kb on - strand, within AO353_09810 at 2145.678 kb on - strand, within AO353_09810 at 2145.678 kb on - strand, within AO353_09810 at 2145.679 kb on + strand, within AO353_09810 at 2145.679 kb on + strand, within AO353_09810 at 2145.680 kb on - strand, within AO353_09810 at 2145.699 kb on + strand, within AO353_09810 at 2145.700 kb on - strand, within AO353_09810 at 2145.803 kb on + strand at 2145.819 kb on + strand at 2145.848 kb on + strand at 2145.853 kb on + strand at 2145.853 kb on + strand at 2145.853 kb on + strand at 2145.897 kb on + strand at 2145.915 kb on - strand, within AO353_09815 at 2145.915 kb on - strand, within AO353_09815 at 2146.196 kb on - strand, within AO353_09815 at 2146.207 kb on + strand, within AO353_09815 at 2146.210 kb on - strand, within AO353_09815 at 2146.228 kb on + strand, within AO353_09815 at 2146.228 kb on + strand, within AO353_09815 at 2146.229 kb on - strand, within AO353_09815 at 2146.229 kb on - strand, within AO353_09815 at 2146.231 kb on - strand, within AO353_09815 at 2146.231 kb on - strand, within AO353_09815 at 2146.231 kb on - strand, within AO353_09815 at 2146.273 kb on + strand at 2146.286 kb on - strand at 2146.286 kb on - strand at 2146.350 kb on - strand at 2146.368 kb on + strand at 2146.382 kb on - strand at 2146.382 kb on - strand at 2146.382 kb on - strand at 2146.382 kb on - strand at 2146.401 kb on + strand at 2146.401 kb on + strand at 2146.401 kb on + strand at 2146.401 kb on + strand at 2146.401 kb on + strand at 2146.401 kb on + strand at 2146.401 kb on + strand at 2146.402 kb on - strand at 2146.402 kb on - strand at 2146.402 kb on - strand at 2146.402 kb on - strand at 2146.402 kb on - strand at 2146.402 kb on - strand at 2146.404 kb on + strand at 2146.404 kb on + strand at 2146.405 kb on - strand at 2146.405 kb on - strand at 2146.475 kb on - strand, within AO353_09820 at 2146.497 kb on + strand, within AO353_09820 at 2146.497 kb on + strand, within AO353_09820 at 2146.497 kb on + strand, within AO353_09820 at 2146.497 kb on + strand, within AO353_09820 at 2146.497 kb on + strand, within AO353_09820 at 2146.497 kb on + strand, within AO353_09820 at 2146.497 kb on + strand, within AO353_09820 at 2146.498 kb on - strand at 2146.498 kb on - strand, within AO353_09820 at 2146.498 kb on - strand, within AO353_09820 at 2146.498 kb on - strand, within AO353_09820 at 2146.498 kb on - strand, within AO353_09820 at 2146.498 kb on - strand, within AO353_09820 at 2146.498 kb on - strand, within AO353_09820 at 2146.498 kb on - strand, within AO353_09820 at 2146.508 kb on + strand, within AO353_09820 at 2146.508 kb on + strand, within AO353_09820 at 2146.508 kb on + strand, within AO353_09820 at 2146.508 kb on + strand, within AO353_09820 at 2146.508 kb on + strand, within AO353_09820 at 2146.508 kb on + strand, within AO353_09820 at 2146.509 kb on - strand, within AO353_09820 at 2146.509 kb on - strand, within AO353_09820 at 2146.509 kb on - strand, within AO353_09820 at 2146.509 kb on - strand, within AO353_09820 at 2146.509 kb on - strand, within AO353_09820 at 2146.509 kb on - strand, within AO353_09820 at 2146.509 kb on - strand, within AO353_09820 at 2146.689 kb on + strand, within AO353_09820 at 2146.689 kb on + strand, within AO353_09820 at 2146.690 kb on - strand, within AO353_09820 at 2146.690 kb on - strand, within AO353_09820 at 2146.694 kb on - strand, within AO353_09820 at 2146.694 kb on - strand, within AO353_09820 at 2146.703 kb on + strand, within AO353_09820 at 2146.704 kb on - strand, within AO353_09820 at 2146.704 kb on - strand, within AO353_09820 at 2146.704 kb on - strand, within AO353_09820 at 2146.704 kb on - strand, within AO353_09820 at 2146.745 kb on + strand, within AO353_09820 at 2146.746 kb on - strand, within AO353_09820 at 2146.771 kb on + strand, within AO353_09820 at 2146.771 kb on + strand, within AO353_09820 at 2146.771 kb on + strand, within AO353_09820 at 2146.772 kb on - strand, within AO353_09820 at 2146.772 kb on - strand, within AO353_09820 at 2146.790 kb on + strand, within AO353_09820 at 2146.790 kb on + strand, within AO353_09820 at 2146.791 kb on - strand, within AO353_09820 at 2146.791 kb on - strand, within AO353_09820 at 2146.791 kb on - strand, within AO353_09820 at 2146.831 kb on - strand at 2146.831 kb on - strand at 2146.831 kb on - strand at 2146.851 kb on - strand at 2146.851 kb on - strand at 2146.932 kb on + strand at 2146.932 kb on + strand at 2146.932 kb on + strand at 2146.932 kb on + strand at 2146.933 kb on - strand at 2146.933 kb on - strand at 2147.069 kb on + strand, within AO353_09825 at 2147.069 kb on + strand, within AO353_09825 at 2147.099 kb on + strand, within AO353_09825 at 2147.100 kb on - strand, within AO353_09825 at 2147.207 kb on + strand at 2147.207 kb on + strand at 2147.208 kb on - strand at 2147.208 kb on - strand at 2147.208 kb on - strand at 2147.208 kb on - strand at 2147.245 kb on + strand at 2147.245 kb on + strand at 2147.245 kb on + strand at 2147.245 kb on + strand at 2147.245 kb on + strand at 2147.245 kb on + strand at 2147.245 kb on + strand at 2147.245 kb on + strand at 2147.245 kb on + strand at 2147.245 kb on + strand at 2147.245 kb on + strand at 2147.245 kb on + strand at 2147.246 kb on - strand at 2147.246 kb on - strand at 2147.246 kb on - strand at 2147.246 kb on - strand at 2147.246 kb on - strand at 2147.246 kb on - strand at 2147.246 kb on - strand at 2147.246 kb on - strand at 2147.246 kb on - strand at 2147.246 kb on - strand at 2147.246 kb on - strand at 2147.246 kb on - strand at 2147.293 kb on + strand at 2147.293 kb on + strand at 2147.294 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.125 vol% remove 2,144,892 - AO353_09800 0.73 +0.6 2,145,241 + -1.0 2,145,279 - +2.3 2,145,469 + AO353_09810 0.27 +0.3 2,145,584 - AO353_09810 0.53 +1.6 2,145,612 - AO353_09810 0.59 -0.0 2,145,612 - AO353_09810 0.59 +0.1 2,145,612 - AO353_09810 0.59 -0.3 2,145,612 - AO353_09810 0.59 +0.8 2,145,646 - AO353_09810 0.66 -1.7 2,145,648 - AO353_09810 0.67 +0.6 2,145,678 - AO353_09810 0.74 -0.3 2,145,678 - AO353_09810 0.74 +0.0 2,145,679 + AO353_09810 0.74 -0.0 2,145,679 + AO353_09810 0.74 -0.3 2,145,680 - AO353_09810 0.74 +0.0 2,145,699 + AO353_09810 0.78 +1.3 2,145,700 - AO353_09810 0.79 -0.8 2,145,803 + -0.3 2,145,819 + +1.9 2,145,848 + -0.1 2,145,853 + -0.4 2,145,853 + -1.7 2,145,853 + +0.6 2,145,897 + -1.3 2,145,915 - AO353_09815 0.10 -0.7 2,145,915 - AO353_09815 0.10 -0.2 2,146,196 - AO353_09815 0.75 -0.9 2,146,207 + AO353_09815 0.77 -0.3 2,146,210 - AO353_09815 0.78 -0.6 2,146,228 + AO353_09815 0.82 -0.6 2,146,228 + AO353_09815 0.82 -0.5 2,146,229 - AO353_09815 0.82 -0.4 2,146,229 - AO353_09815 0.82 +0.1 2,146,231 - AO353_09815 0.83 +0.0 2,146,231 - AO353_09815 0.83 -1.6 2,146,231 - AO353_09815 0.83 -2.7 2,146,273 + +0.4 2,146,286 - -0.7 2,146,286 - +0.7 2,146,350 - -0.4 2,146,368 + -2.1 2,146,382 - -0.0 2,146,382 - -0.7 2,146,382 - -0.0 2,146,382 - +0.9 2,146,401 + -1.5 2,146,401 + -0.5 2,146,401 + +0.6 2,146,401 + -1.9 2,146,401 + +0.5 2,146,401 + +1.6 2,146,401 + +0.2 2,146,402 - -2.0 2,146,402 - +0.9 2,146,402 - +0.0 2,146,402 - +0.3 2,146,402 - -0.8 2,146,402 - +2.0 2,146,404 + -0.7 2,146,404 + -0.7 2,146,405 - -0.1 2,146,405 - +0.2 2,146,475 - AO353_09820 0.21 +1.0 2,146,497 + AO353_09820 0.26 -0.7 2,146,497 + AO353_09820 0.26 +0.7 2,146,497 + AO353_09820 0.26 +0.5 2,146,497 + AO353_09820 0.26 +1.0 2,146,497 + AO353_09820 0.26 -0.6 2,146,497 + AO353_09820 0.26 +0.1 2,146,497 + AO353_09820 0.26 +0.5 2,146,498 - +0.3 2,146,498 - AO353_09820 0.26 +0.3 2,146,498 - AO353_09820 0.26 -0.5 2,146,498 - AO353_09820 0.26 +1.8 2,146,498 - AO353_09820 0.26 +0.6 2,146,498 - AO353_09820 0.26 +1.3 2,146,498 - AO353_09820 0.26 +0.6 2,146,498 - AO353_09820 0.26 -0.4 2,146,508 + AO353_09820 0.28 -0.0 2,146,508 + AO353_09820 0.28 -0.9 2,146,508 + AO353_09820 0.28 +0.1 2,146,508 + AO353_09820 0.28 -0.1 2,146,508 + AO353_09820 0.28 +1.3 2,146,508 + AO353_09820 0.28 -0.3 2,146,509 - AO353_09820 0.28 -0.3 2,146,509 - AO353_09820 0.28 -0.8 2,146,509 - AO353_09820 0.28 -0.2 2,146,509 - AO353_09820 0.28 +1.3 2,146,509 - AO353_09820 0.28 -0.0 2,146,509 - AO353_09820 0.28 -0.5 2,146,509 - AO353_09820 0.28 -0.0 2,146,689 + AO353_09820 0.66 +0.3 2,146,689 + AO353_09820 0.66 +0.3 2,146,690 - AO353_09820 0.66 -0.0 2,146,690 - AO353_09820 0.66 -0.3 2,146,694 - AO353_09820 0.67 +1.6 2,146,694 - AO353_09820 0.67 -1.5 2,146,703 + AO353_09820 0.69 +0.3 2,146,704 - AO353_09820 0.69 -0.5 2,146,704 - AO353_09820 0.69 +1.2 2,146,704 - AO353_09820 0.69 -0.7 2,146,704 - AO353_09820 0.69 +0.9 2,146,745 + AO353_09820 0.78 -1.5 2,146,746 - AO353_09820 0.78 +1.7 2,146,771 + AO353_09820 0.83 +1.5 2,146,771 + AO353_09820 0.83 -0.2 2,146,771 + AO353_09820 0.83 -0.6 2,146,772 - AO353_09820 0.83 +0.9 2,146,772 - AO353_09820 0.83 -0.3 2,146,790 + AO353_09820 0.87 +0.3 2,146,790 + AO353_09820 0.87 +1.6 2,146,791 - AO353_09820 0.87 +0.3 2,146,791 - AO353_09820 0.87 +0.3 2,146,791 - AO353_09820 0.87 +1.8 2,146,831 - +0.3 2,146,831 - +0.6 2,146,831 - -0.6 2,146,851 - +0.0 2,146,851 - +0.3 2,146,932 + -0.8 2,146,932 + -0.5 2,146,932 + -0.1 2,146,932 + -0.6 2,146,933 - -1.1 2,146,933 - +0.2 2,147,069 + AO353_09825 0.47 +1.0 2,147,069 + AO353_09825 0.47 +1.0 2,147,099 + AO353_09825 0.58 -1.7 2,147,100 - AO353_09825 0.59 +0.9 2,147,207 + +1.0 2,147,207 + +1.6 2,147,208 - +0.3 2,147,208 - -0.5 2,147,208 - -0.3 2,147,208 - -0.6 2,147,245 + +1.3 2,147,245 + -2.0 2,147,245 + -1.0 2,147,245 + -0.3 2,147,245 + +0.4 2,147,245 + +1.3 2,147,245 + +0.5 2,147,245 + -0.9 2,147,245 + +0.8 2,147,245 + +0.3 2,147,245 + +0.7 2,147,245 + -0.6 2,147,246 - -1.7 2,147,246 - -0.5 2,147,246 - +0.6 2,147,246 - +0.3 2,147,246 - +0.8 2,147,246 - -0.6 2,147,246 - +0.0 2,147,246 - +0.3 2,147,246 - +1.0 2,147,246 - +0.1 2,147,246 - +0.6 2,147,246 - -0.5 2,147,293 + +0.2 2,147,293 + +1.9 2,147,294 - -0.3
Or see this region's nucleotide sequence