Experiment: Furfuryl Alcohol 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_08000 and AO353_08005 are separated by 176 nucleotides AO353_08005 and AO353_08010 are separated by 322 nucleotides
AO353_08000: AO353_08000 - arabinose transporter permease, at 1,763,467 to 1,764,636
_08000
AO353_08005: AO353_08005 - thioesterase, at 1,764,813 to 1,765,217
_08005
AO353_08010: AO353_08010 - adenosylhomocysteinase, at 1,765,540 to 1,766,949
_08010
Position (kb)
1764
1765
1766 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1763.822 kb on + strand, within AO353_08000 at 1763.822 kb on + strand, within AO353_08000 at 1763.888 kb on + strand, within AO353_08000 at 1763.889 kb on - strand, within AO353_08000 at 1763.889 kb on - strand, within AO353_08000 at 1763.889 kb on - strand, within AO353_08000 at 1763.889 kb on - strand, within AO353_08000 at 1763.923 kb on + strand, within AO353_08000 at 1763.923 kb on + strand, within AO353_08000 at 1764.050 kb on + strand, within AO353_08000 at 1764.050 kb on + strand, within AO353_08000 at 1764.050 kb on + strand, within AO353_08000 at 1764.050 kb on + strand, within AO353_08000 at 1764.051 kb on - strand, within AO353_08000 at 1764.051 kb on - strand, within AO353_08000 at 1764.127 kb on + strand, within AO353_08000 at 1764.127 kb on + strand, within AO353_08000 at 1764.127 kb on + strand, within AO353_08000 at 1764.128 kb on - strand, within AO353_08000 at 1764.128 kb on - strand, within AO353_08000 at 1764.128 kb on - strand, within AO353_08000 at 1764.128 kb on - strand, within AO353_08000 at 1764.128 kb on - strand, within AO353_08000 at 1764.266 kb on + strand, within AO353_08000 at 1764.353 kb on + strand, within AO353_08000 at 1764.353 kb on + strand, within AO353_08000 at 1764.353 kb on + strand, within AO353_08000 at 1764.354 kb on - strand, within AO353_08000 at 1764.380 kb on + strand, within AO353_08000 at 1764.380 kb on + strand, within AO353_08000 at 1764.447 kb on - strand, within AO353_08000 at 1764.447 kb on - strand, within AO353_08000 at 1764.588 kb on + strand at 1764.588 kb on + strand at 1764.588 kb on + strand at 1764.588 kb on + strand at 1764.589 kb on - strand at 1764.589 kb on - strand at 1764.592 kb on + strand at 1764.592 kb on + strand at 1764.593 kb on - strand at 1764.593 kb on - strand at 1764.593 kb on - strand at 1764.593 kb on - strand at 1764.593 kb on - strand at 1764.593 kb on - strand at 1764.641 kb on + strand at 1764.641 kb on + strand at 1764.641 kb on + strand at 1764.641 kb on + strand at 1764.641 kb on + strand at 1764.642 kb on - strand at 1764.642 kb on - strand at 1764.642 kb on - strand at 1764.642 kb on - strand at 1764.642 kb on - strand at 1764.642 kb on - strand at 1764.642 kb on - strand at 1764.642 kb on - strand at 1764.642 kb on - strand at 1764.642 kb on - strand at 1764.642 kb on - strand at 1764.642 kb on - strand at 1764.642 kb on - strand at 1764.645 kb on + strand at 1764.645 kb on + strand at 1764.646 kb on - strand at 1764.646 kb on - strand at 1764.646 kb on - strand at 1764.646 kb on - strand at 1764.646 kb on - strand at 1764.646 kb on - strand at 1764.646 kb on - strand at 1764.660 kb on + strand at 1764.660 kb on + strand at 1764.661 kb on - strand at 1764.661 kb on - strand at 1764.661 kb on - strand at 1764.713 kb on + strand at 1764.853 kb on + strand at 1764.853 kb on + strand at 1764.853 kb on + strand at 1764.853 kb on + strand at 1764.853 kb on + strand at 1764.853 kb on + strand at 1764.853 kb on - strand at 1764.854 kb on - strand, within AO353_08005 at 1764.854 kb on - strand, within AO353_08005 at 1764.854 kb on - strand, within AO353_08005 at 1764.854 kb on - strand, within AO353_08005 at 1764.854 kb on - strand, within AO353_08005 at 1764.854 kb on - strand, within AO353_08005 at 1764.986 kb on + strand, within AO353_08005 at 1765.011 kb on - strand, within AO353_08005 at 1765.069 kb on + strand, within AO353_08005 at 1765.069 kb on + strand, within AO353_08005 at 1765.070 kb on - strand, within AO353_08005 at 1765.070 kb on - strand, within AO353_08005 at 1765.070 kb on - strand, within AO353_08005 at 1765.070 kb on - strand, within AO353_08005 at 1765.070 kb on - strand, within AO353_08005 at 1765.070 kb on - strand, within AO353_08005 at 1765.070 kb on - strand, within AO353_08005 at 1765.070 kb on - strand, within AO353_08005 at 1765.111 kb on + strand, within AO353_08005 at 1765.111 kb on + strand, within AO353_08005 at 1765.111 kb on + strand, within AO353_08005 at 1765.111 kb on + strand, within AO353_08005 at 1765.111 kb on + strand, within AO353_08005 at 1765.112 kb on - strand, within AO353_08005 at 1765.112 kb on - strand, within AO353_08005 at 1765.112 kb on - strand, within AO353_08005 at 1765.191 kb on + strand at 1765.191 kb on + strand at 1765.191 kb on + strand at 1765.191 kb on + strand at 1765.191 kb on + strand at 1765.294 kb on + strand at 1765.294 kb on + strand at 1765.295 kb on - strand at 1765.295 kb on - strand at 1765.359 kb on + strand at 1765.359 kb on + strand at 1765.359 kb on + strand at 1765.360 kb on - strand at 1765.361 kb on + strand at 1765.518 kb on + strand at 1765.518 kb on + strand at 1765.518 kb on + strand at 1765.518 kb on + strand at 1765.518 kb on + strand at 1765.518 kb on + strand at 1765.518 kb on + strand at 1765.522 kb on + strand at 1765.522 kb on + strand at 1765.522 kb on + strand at 1765.522 kb on + strand at 1765.522 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.125 vol% remove 1,763,822 + AO353_08000 0.30 -0.2 1,763,822 + AO353_08000 0.30 -0.8 1,763,888 + AO353_08000 0.36 -0.1 1,763,889 - AO353_08000 0.36 +1.5 1,763,889 - AO353_08000 0.36 -0.2 1,763,889 - AO353_08000 0.36 -1.0 1,763,889 - AO353_08000 0.36 +0.3 1,763,923 + AO353_08000 0.39 -1.4 1,763,923 + AO353_08000 0.39 +0.0 1,764,050 + AO353_08000 0.50 -0.4 1,764,050 + AO353_08000 0.50 -1.4 1,764,050 + AO353_08000 0.50 +0.4 1,764,050 + AO353_08000 0.50 +0.2 1,764,051 - AO353_08000 0.50 -0.6 1,764,051 - AO353_08000 0.50 -0.1 1,764,127 + AO353_08000 0.56 -1.8 1,764,127 + AO353_08000 0.56 -2.5 1,764,127 + AO353_08000 0.56 +1.4 1,764,128 - AO353_08000 0.56 +0.4 1,764,128 - AO353_08000 0.56 -0.6 1,764,128 - AO353_08000 0.56 -0.0 1,764,128 - AO353_08000 0.56 -0.8 1,764,128 - AO353_08000 0.56 +0.1 1,764,266 + AO353_08000 0.68 +0.4 1,764,353 + AO353_08000 0.76 -1.6 1,764,353 + AO353_08000 0.76 +1.2 1,764,353 + AO353_08000 0.76 -1.3 1,764,354 - AO353_08000 0.76 +0.2 1,764,380 + AO353_08000 0.78 +0.7 1,764,380 + AO353_08000 0.78 +1.2 1,764,447 - AO353_08000 0.84 +0.1 1,764,447 - AO353_08000 0.84 -1.1 1,764,588 + -0.0 1,764,588 + +0.9 1,764,588 + +1.3 1,764,588 + +0.1 1,764,589 - +0.2 1,764,589 - -2.1 1,764,592 + -0.1 1,764,592 + -0.6 1,764,593 - +1.2 1,764,593 - +0.6 1,764,593 - -1.8 1,764,593 - +0.1 1,764,593 - +0.0 1,764,593 - -0.3 1,764,641 + +1.0 1,764,641 + -0.7 1,764,641 + -1.1 1,764,641 + +0.4 1,764,641 + +0.2 1,764,642 - -0.6 1,764,642 - -0.0 1,764,642 - +1.7 1,764,642 - -1.2 1,764,642 - +0.9 1,764,642 - +0.0 1,764,642 - +0.2 1,764,642 - -0.9 1,764,642 - +0.8 1,764,642 - +1.2 1,764,642 - +0.1 1,764,642 - +0.0 1,764,642 - -0.1 1,764,645 + -0.2 1,764,645 + -0.8 1,764,646 - -0.8 1,764,646 - +0.3 1,764,646 - -1.1 1,764,646 - -0.4 1,764,646 - -0.0 1,764,646 - +0.2 1,764,646 - -0.6 1,764,660 + -0.2 1,764,660 + -0.0 1,764,661 - +1.4 1,764,661 - -0.0 1,764,661 - +0.2 1,764,713 + +0.2 1,764,853 + -0.6 1,764,853 + -0.7 1,764,853 + -0.7 1,764,853 + -0.1 1,764,853 + +0.6 1,764,853 + -0.3 1,764,853 - +0.2 1,764,854 - AO353_08005 0.10 -0.2 1,764,854 - AO353_08005 0.10 -2.1 1,764,854 - AO353_08005 0.10 -0.6 1,764,854 - AO353_08005 0.10 -1.1 1,764,854 - AO353_08005 0.10 -0.4 1,764,854 - AO353_08005 0.10 -1.6 1,764,986 + AO353_08005 0.43 -1.4 1,765,011 - AO353_08005 0.49 -1.7 1,765,069 + AO353_08005 0.63 -1.6 1,765,069 + AO353_08005 0.63 -1.6 1,765,070 - AO353_08005 0.63 -2.4 1,765,070 - AO353_08005 0.63 -0.5 1,765,070 - AO353_08005 0.63 -0.9 1,765,070 - AO353_08005 0.63 -2.4 1,765,070 - AO353_08005 0.63 +1.2 1,765,070 - AO353_08005 0.63 +0.7 1,765,070 - AO353_08005 0.63 -0.4 1,765,070 - AO353_08005 0.63 -0.8 1,765,111 + AO353_08005 0.74 -2.3 1,765,111 + AO353_08005 0.74 -1.4 1,765,111 + AO353_08005 0.74 -0.4 1,765,111 + AO353_08005 0.74 -3.6 1,765,111 + AO353_08005 0.74 -1.6 1,765,112 - AO353_08005 0.74 -2.1 1,765,112 - AO353_08005 0.74 -0.4 1,765,112 - AO353_08005 0.74 +0.4 1,765,191 + +0.1 1,765,191 + -1.8 1,765,191 + -0.3 1,765,191 + +0.2 1,765,191 + -1.5 1,765,294 + -1.1 1,765,294 + +0.6 1,765,295 - +0.7 1,765,295 - +0.9 1,765,359 + +0.8 1,765,359 + +0.2 1,765,359 + +0.2 1,765,360 - -2.3 1,765,361 + -0.9 1,765,518 + +0.8 1,765,518 + -1.4 1,765,518 + +0.1 1,765,518 + +1.4 1,765,518 + +0.4 1,765,518 + +0.3 1,765,518 + +0.9 1,765,522 + +0.7 1,765,522 + -0.1 1,765,522 + -0.2 1,765,522 + +0.4 1,765,522 + +0.6
Or see this region's nucleotide sequence