Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07850

Experiment: Furfuryl Alcohol 0.125 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_07845 and AO353_07850 are separated by 195 nucleotidesAO353_07850 and AO353_07855 are separated by 192 nucleotides AO353_07845: AO353_07845 - EmrB/QacA subfamily drug resistance transporter, at 1,730,229 to 1,731,656 _07845 AO353_07850: AO353_07850 - ATP-dependent RNA helicase, at 1,731,852 to 1,733,237 _07850 AO353_07855: AO353_07855 - hypothetical protein, at 1,733,430 to 1,734,608 _07855 Position (kb) 1731 1732 1733 1734Strain fitness (log2 ratio) -2 -1 0 1 2at 1731.107 kb on - strand, within AO353_07845at 1731.123 kb on + strand, within AO353_07845at 1731.124 kb on - strand, within AO353_07845at 1731.300 kb on + strand, within AO353_07845at 1731.368 kb on + strand, within AO353_07845at 1731.369 kb on - strand, within AO353_07845at 1731.544 kb on + strandat 1731.544 kb on + strandat 1731.544 kb on + strandat 1731.545 kb on - strandat 1731.545 kb on - strandat 1731.545 kb on - strandat 1731.654 kb on + strandat 1731.654 kb on + strandat 1731.655 kb on - strandat 1731.655 kb on - strandat 1731.655 kb on - strandat 1731.655 kb on - strandat 1731.662 kb on - strandat 1731.719 kb on - strandat 1731.719 kb on - strandat 1731.758 kb on + strandat 1731.759 kb on - strandat 1731.759 kb on - strandat 1731.759 kb on - strandat 1731.772 kb on - strandat 1731.816 kb on + strandat 1731.816 kb on + strandat 1731.816 kb on + strandat 1731.816 kb on + strandat 1731.875 kb on + strandat 1731.876 kb on - strandat 1731.876 kb on - strandat 1731.876 kb on - strandat 1731.876 kb on - strandat 1731.878 kb on + strandat 1731.878 kb on + strandat 1731.879 kb on - strandat 1731.879 kb on - strandat 1732.350 kb on + strand, within AO353_07850at 1732.350 kb on + strand, within AO353_07850at 1732.351 kb on - strand, within AO353_07850at 1732.351 kb on - strand, within AO353_07850at 1732.351 kb on - strand, within AO353_07850at 1732.419 kb on + strand, within AO353_07850at 1732.733 kb on + strand, within AO353_07850at 1732.734 kb on - strand, within AO353_07850at 1732.734 kb on - strand, within AO353_07850at 1732.734 kb on - strand, within AO353_07850at 1733.039 kb on + strand, within AO353_07850at 1733.142 kb on + strandat 1733.142 kb on + strandat 1733.142 kb on + strandat 1733.142 kb on + strandat 1733.142 kb on + strandat 1733.142 kb on + strandat 1733.142 kb on + strandat 1733.142 kb on + strandat 1733.143 kb on - strandat 1733.143 kb on - strandat 1733.143 kb on - strandat 1733.143 kb on - strandat 1733.143 kb on - strandat 1733.343 kb on + strandat 1733.343 kb on + strandat 1733.343 kb on + strandat 1733.352 kb on + strandat 1733.353 kb on - strandat 1733.407 kb on + strandat 1733.439 kb on - strandat 1733.595 kb on + strand, within AO353_07855at 1733.596 kb on - strand, within AO353_07855at 1733.596 kb on - strand, within AO353_07855at 1733.596 kb on - strand, within AO353_07855at 1733.596 kb on - strand, within AO353_07855at 1733.596 kb on - strand, within AO353_07855at 1733.639 kb on + strand, within AO353_07855at 1733.640 kb on - strand, within AO353_07855at 1733.659 kb on - strand, within AO353_07855at 1733.660 kb on + strand, within AO353_07855at 1733.706 kb on + strand, within AO353_07855at 1733.707 kb on - strand, within AO353_07855at 1733.731 kb on + strand, within AO353_07855at 1733.731 kb on + strand, within AO353_07855at 1733.732 kb on - strand, within AO353_07855at 1733.732 kb on - strand, within AO353_07855at 1733.732 kb on - strand, within AO353_07855at 1733.732 kb on - strand, within AO353_07855at 1733.732 kb on - strand, within AO353_07855at 1733.732 kb on - strand, within AO353_07855at 1733.732 kb on - strand, within AO353_07855at 1733.956 kb on + strand, within AO353_07855at 1733.956 kb on + strand, within AO353_07855at 1733.956 kb on + strand, within AO353_07855at 1733.957 kb on - strand, within AO353_07855at 1734.056 kb on + strand, within AO353_07855at 1734.057 kb on - strand, within AO353_07855

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Per-strain Table

Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.125 vol%
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1,731,107 - AO353_07845 0.61 -0.6
1,731,123 + AO353_07845 0.63 +0.2
1,731,124 - AO353_07845 0.63 -1.1
1,731,300 + AO353_07845 0.75 +0.9
1,731,368 + AO353_07845 0.80 +1.3
1,731,369 - AO353_07845 0.80 -1.7
1,731,544 + +0.2
1,731,544 + -1.8
1,731,544 + -0.1
1,731,545 - +1.2
1,731,545 - -1.0
1,731,545 - +0.4
1,731,654 + -1.8
1,731,654 + -0.3
1,731,655 - -0.6
1,731,655 - -0.3
1,731,655 - +0.7
1,731,655 - -0.4
1,731,662 - +0.9
1,731,719 - +0.5
1,731,719 - -0.3
1,731,758 + -1.4
1,731,759 - -0.2
1,731,759 - -0.1
1,731,759 - -0.4
1,731,772 - -1.2
1,731,816 + +0.6
1,731,816 + -0.0
1,731,816 + +0.2
1,731,816 + -1.3
1,731,875 + -1.1
1,731,876 - -1.7
1,731,876 - +0.5
1,731,876 - +0.6
1,731,876 - +1.4
1,731,878 + +0.7
1,731,878 + -0.0
1,731,879 - +1.2
1,731,879 - +0.6
1,732,350 + AO353_07850 0.36 -1.3
1,732,350 + AO353_07850 0.36 -0.0
1,732,351 - AO353_07850 0.36 -0.8
1,732,351 - AO353_07850 0.36 -1.5
1,732,351 - AO353_07850 0.36 -1.3
1,732,419 + AO353_07850 0.41 -0.4
1,732,733 + AO353_07850 0.64 -0.8
1,732,734 - AO353_07850 0.64 +0.3
1,732,734 - AO353_07850 0.64 +0.6
1,732,734 - AO353_07850 0.64 -0.9
1,733,039 + AO353_07850 0.86 -0.5
1,733,142 + -0.2
1,733,142 + -0.1
1,733,142 + -1.2
1,733,142 + +1.2
1,733,142 + +0.4
1,733,142 + -2.3
1,733,142 + -0.2
1,733,142 + -2.7
1,733,143 - -0.4
1,733,143 - +1.2
1,733,143 - +0.4
1,733,143 - -2.6
1,733,143 - -1.4
1,733,343 + -0.3
1,733,343 + +2.6
1,733,343 + -0.7
1,733,352 + +1.5
1,733,353 - -0.5
1,733,407 + -1.2
1,733,439 - -0.6
1,733,595 + AO353_07855 0.14 -0.4
1,733,596 - AO353_07855 0.14 -0.1
1,733,596 - AO353_07855 0.14 -0.4
1,733,596 - AO353_07855 0.14 -2.2
1,733,596 - AO353_07855 0.14 +0.4
1,733,596 - AO353_07855 0.14 -0.4
1,733,639 + AO353_07855 0.18 -0.3
1,733,640 - AO353_07855 0.18 -0.7
1,733,659 - AO353_07855 0.19 +0.4
1,733,660 + AO353_07855 0.20 -0.4
1,733,706 + AO353_07855 0.23 -0.2
1,733,707 - AO353_07855 0.23 +0.6
1,733,731 + AO353_07855 0.26 +1.2
1,733,731 + AO353_07855 0.26 +1.8
1,733,732 - AO353_07855 0.26 -0.4
1,733,732 - AO353_07855 0.26 -0.4
1,733,732 - AO353_07855 0.26 -0.7
1,733,732 - AO353_07855 0.26 +0.4
1,733,732 - AO353_07855 0.26 +0.2
1,733,732 - AO353_07855 0.26 -0.8
1,733,732 - AO353_07855 0.26 -0.8
1,733,956 + AO353_07855 0.45 +1.5
1,733,956 + AO353_07855 0.45 -0.0
1,733,956 + AO353_07855 0.45 +0.5
1,733,957 - AO353_07855 0.45 +1.4
1,734,056 + AO353_07855 0.53 +1.1
1,734,057 - AO353_07855 0.53 -0.0

Or see this region's nucleotide sequence