Experiment: Furfuryl Alcohol 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03320 and AO353_03325 are separated by 42 nucleotides AO353_03325 and AO353_03330 are separated by 67 nucleotides AO353_03330 and AO353_03335 are separated by 203 nucleotides AO353_03335 and AO353_03340 are separated by 21 nucleotides
AO353_03320: AO353_03320 - alpha/beta hydrolase, at 708,269 to 709,213
_03320
AO353_03325: AO353_03325 - 3-hydroxybutyryl-CoA dehydratase, at 709,256 to 709,726
_03325
AO353_03330: AO353_03330 - aldehyde dehydrogenase, at 709,794 to 710,261
_03330
AO353_03335: AO353_03335 - hypothetical protein, at 710,465 to 710,701
_03335
AO353_03340: AO353_03340 - class V aminotransferase, at 710,723 to 711,904
_03340
Position (kb) 709
710
711 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 708.869 kb on + strand, within AO353_03320 at 708.869 kb on + strand, within AO353_03320 at 708.869 kb on + strand, within AO353_03320 at 708.869 kb on + strand, within AO353_03320 at 708.869 kb on + strand, within AO353_03320 at 708.869 kb on + strand, within AO353_03320 at 708.869 kb on + strand, within AO353_03320 at 708.870 kb on - strand, within AO353_03320 at 708.870 kb on - strand, within AO353_03320 at 708.870 kb on - strand, within AO353_03320 at 708.870 kb on - strand, within AO353_03320 at 708.870 kb on - strand, within AO353_03320 at 708.870 kb on - strand, within AO353_03320 at 708.870 kb on - strand, within AO353_03320 at 709.093 kb on + strand, within AO353_03320 at 709.093 kb on + strand, within AO353_03320 at 709.093 kb on + strand, within AO353_03320 at 709.093 kb on + strand, within AO353_03320 at 709.093 kb on + strand, within AO353_03320 at 709.093 kb on + strand, within AO353_03320 at 709.094 kb on - strand, within AO353_03320 at 709.094 kb on - strand, within AO353_03320 at 709.094 kb on - strand, within AO353_03320 at 709.094 kb on - strand, within AO353_03320 at 709.094 kb on - strand, within AO353_03320 at 709.097 kb on + strand, within AO353_03320 at 709.211 kb on + strand at 709.211 kb on + strand at 709.211 kb on + strand at 709.222 kb on + strand at 709.223 kb on - strand at 709.223 kb on - strand at 709.225 kb on + strand at 709.225 kb on + strand at 709.225 kb on + strand at 709.225 kb on + strand at 709.225 kb on + strand at 709.225 kb on + strand at 709.225 kb on + strand at 709.225 kb on + strand at 709.225 kb on + strand at 709.225 kb on + strand at 709.226 kb on - strand at 709.226 kb on - strand at 709.226 kb on - strand at 709.226 kb on - strand at 709.226 kb on - strand at 709.226 kb on - strand at 709.226 kb on - strand at 709.226 kb on - strand at 709.226 kb on - strand at 709.231 kb on + strand at 709.231 kb on + strand at 709.231 kb on + strand at 709.231 kb on + strand at 709.231 kb on + strand at 709.231 kb on + strand at 709.231 kb on + strand at 709.231 kb on + strand at 709.231 kb on + strand at 709.231 kb on + strand at 709.231 kb on + strand at 709.232 kb on - strand at 709.232 kb on - strand at 709.232 kb on - strand at 709.232 kb on - strand at 709.232 kb on - strand at 709.232 kb on - strand at 709.502 kb on + strand at 709.502 kb on + strand, within AO353_03325 at 709.502 kb on + strand at 709.503 kb on - strand at 709.560 kb on + strand, within AO353_03325 at 709.733 kb on + strand at 709.733 kb on + strand at 709.733 kb on + strand at 709.733 kb on + strand at 709.733 kb on + strand at 709.733 kb on + strand at 709.733 kb on + strand at 709.734 kb on - strand at 709.734 kb on - strand at 709.734 kb on - strand at 709.734 kb on - strand at 709.734 kb on - strand at 709.734 kb on - strand at 709.734 kb on - strand at 709.734 kb on - strand at 709.734 kb on - strand at 709.734 kb on - strand at 709.734 kb on - strand at 709.734 kb on - strand at 709.735 kb on + strand at 709.735 kb on + strand at 709.735 kb on + strand at 709.735 kb on + strand at 709.735 kb on + strand at 709.735 kb on + strand at 709.735 kb on + strand at 709.735 kb on + strand at 709.735 kb on + strand at 709.735 kb on + strand at 709.735 kb on + strand at 709.736 kb on - strand at 709.736 kb on - strand at 709.736 kb on - strand at 709.736 kb on - strand at 709.736 kb on - strand at 709.736 kb on - strand at 709.736 kb on - strand at 709.736 kb on - strand at 709.736 kb on - strand at 709.736 kb on - strand at 709.736 kb on - strand at 709.787 kb on - strand at 709.787 kb on - strand at 709.795 kb on + strand at 709.795 kb on + strand at 709.796 kb on - strand at 709.796 kb on - strand at 709.796 kb on - strand at 709.861 kb on + strand, within AO353_03330 at 709.862 kb on - strand, within AO353_03330 at 709.930 kb on + strand, within AO353_03330 at 709.930 kb on + strand, within AO353_03330 at 709.930 kb on + strand, within AO353_03330 at 709.931 kb on - strand, within AO353_03330 at 709.931 kb on - strand, within AO353_03330 at 709.931 kb on - strand, within AO353_03330 at 710.033 kb on + strand, within AO353_03330 at 710.034 kb on - strand, within AO353_03330 at 710.034 kb on - strand, within AO353_03330 at 710.034 kb on - strand, within AO353_03330 at 710.034 kb on - strand, within AO353_03330 at 710.088 kb on - strand, within AO353_03330 at 710.246 kb on + strand at 710.246 kb on + strand at 710.246 kb on + strand at 710.247 kb on - strand at 710.247 kb on - strand at 710.247 kb on - strand at 710.290 kb on + strand at 710.290 kb on + strand at 710.290 kb on + strand at 710.291 kb on - strand at 710.291 kb on - strand at 710.291 kb on - strand at 710.295 kb on - strand at 710.295 kb on - strand at 710.352 kb on + strand at 710.352 kb on + strand at 710.353 kb on - strand at 710.353 kb on - strand at 710.357 kb on + strand at 710.364 kb on + strand at 710.365 kb on - strand at 710.387 kb on + strand at 710.387 kb on + strand at 710.387 kb on + strand at 710.388 kb on - strand at 710.388 kb on - strand at 710.388 kb on - strand at 710.430 kb on - strand at 710.519 kb on + strand, within AO353_03335 at 710.519 kb on + strand, within AO353_03335 at 710.519 kb on + strand, within AO353_03335 at 710.519 kb on + strand, within AO353_03335 at 710.520 kb on - strand, within AO353_03335 at 710.520 kb on - strand, within AO353_03335 at 710.520 kb on - strand, within AO353_03335 at 710.520 kb on - strand, within AO353_03335 at 710.520 kb on - strand, within AO353_03335 at 710.520 kb on - strand, within AO353_03335 at 710.520 kb on - strand, within AO353_03335 at 710.555 kb on + strand, within AO353_03335 at 710.555 kb on + strand, within AO353_03335 at 710.555 kb on + strand, within AO353_03335 at 710.556 kb on - strand, within AO353_03335 at 710.556 kb on - strand, within AO353_03335 at 710.628 kb on + strand, within AO353_03335 at 710.628 kb on + strand, within AO353_03335 at 710.628 kb on + strand, within AO353_03335 at 710.628 kb on + strand, within AO353_03335 at 710.628 kb on + strand, within AO353_03335 at 710.628 kb on + strand, within AO353_03335 at 710.628 kb on + strand, within AO353_03335 at 710.629 kb on - strand, within AO353_03335 at 710.629 kb on - strand, within AO353_03335 at 710.783 kb on + strand at 710.822 kb on + strand at 710.823 kb on - strand at 710.858 kb on + strand, within AO353_03340 at 710.859 kb on - strand, within AO353_03340 at 710.940 kb on + strand, within AO353_03340 at 710.940 kb on + strand, within AO353_03340 at 710.940 kb on + strand, within AO353_03340 at 710.941 kb on - strand, within AO353_03340 at 711.035 kb on + strand, within AO353_03340 at 711.035 kb on + strand, within AO353_03340 at 711.035 kb on + strand, within AO353_03340 at 711.035 kb on + strand, within AO353_03340 at 711.035 kb on + strand, within AO353_03340 at 711.035 kb on + strand, within AO353_03340 at 711.036 kb on - strand, within AO353_03340 at 711.036 kb on - strand, within AO353_03340 at 711.036 kb on - strand, within AO353_03340 at 711.083 kb on + strand, within AO353_03340 at 711.084 kb on - strand, within AO353_03340 at 711.084 kb on - strand, within AO353_03340 at 711.191 kb on + strand, within AO353_03340 at 711.191 kb on + strand, within AO353_03340 at 711.192 kb on - strand, within AO353_03340
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.125 vol% remove 708,869 + AO353_03320 0.63 -0.3 708,869 + AO353_03320 0.63 +1.8 708,869 + AO353_03320 0.63 -1.2 708,869 + AO353_03320 0.63 -1.2 708,869 + AO353_03320 0.63 -1.0 708,869 + AO353_03320 0.63 +0.5 708,869 + AO353_03320 0.63 -0.2 708,870 - AO353_03320 0.64 +0.8 708,870 - AO353_03320 0.64 -0.3 708,870 - AO353_03320 0.64 +0.1 708,870 - AO353_03320 0.64 -0.9 708,870 - AO353_03320 0.64 +0.3 708,870 - AO353_03320 0.64 +0.1 708,870 - AO353_03320 0.64 -2.2 709,093 + AO353_03320 0.87 -0.2 709,093 + AO353_03320 0.87 +1.8 709,093 + AO353_03320 0.87 -1.2 709,093 + AO353_03320 0.87 -2.2 709,093 + AO353_03320 0.87 -0.5 709,093 + AO353_03320 0.87 -0.6 709,094 - AO353_03320 0.87 +0.7 709,094 - AO353_03320 0.87 +1.2 709,094 - AO353_03320 0.87 -1.2 709,094 - AO353_03320 0.87 +0.1 709,094 - AO353_03320 0.87 +0.8 709,097 + AO353_03320 0.88 -0.9 709,211 + +0.6 709,211 + +0.8 709,211 + -1.5 709,222 + -0.2 709,223 - +0.3 709,223 - -0.2 709,225 + +1.4 709,225 + +0.2 709,225 + -0.7 709,225 + -0.6 709,225 + -0.5 709,225 + -0.6 709,225 + +0.6 709,225 + -0.6 709,225 + +0.3 709,225 + +0.2 709,226 - -0.3 709,226 - -0.6 709,226 - +1.3 709,226 - +0.4 709,226 - -0.5 709,226 - -0.6 709,226 - -0.4 709,226 - -0.7 709,226 - -0.9 709,231 + +1.1 709,231 + -0.7 709,231 + +0.3 709,231 + -0.4 709,231 + -0.4 709,231 + +0.8 709,231 + -0.6 709,231 + +0.2 709,231 + +0.0 709,231 + +0.3 709,231 + -0.0 709,232 - +0.2 709,232 - -0.7 709,232 - +0.8 709,232 - -0.5 709,232 - -0.6 709,232 - -1.0 709,502 + -0.7 709,502 + AO353_03325 0.52 -0.5 709,502 + +0.8 709,503 - +0.8 709,560 + AO353_03325 0.65 -0.2 709,733 + +0.4 709,733 + -0.6 709,733 + -0.1 709,733 + +0.3 709,733 + +0.2 709,733 + -0.0 709,733 + -1.2 709,734 - +0.4 709,734 - -1.2 709,734 - -0.3 709,734 - +0.1 709,734 - -0.2 709,734 - +0.4 709,734 - -0.4 709,734 - +0.6 709,734 - -0.2 709,734 - +0.1 709,734 - -0.2 709,734 - -1.2 709,735 + +0.6 709,735 + -0.4 709,735 + +1.0 709,735 + +0.2 709,735 + +0.3 709,735 + +0.1 709,735 + +0.8 709,735 + -0.4 709,735 + +1.3 709,735 + +0.3 709,735 + -1.2 709,736 - +0.3 709,736 - +0.3 709,736 - -0.7 709,736 - -0.8 709,736 - +0.2 709,736 - +1.6 709,736 - -0.4 709,736 - -0.0 709,736 - -0.3 709,736 - +0.2 709,736 - +0.7 709,787 - -0.5 709,787 - +0.9 709,795 + +1.0 709,795 + +0.6 709,796 - +0.8 709,796 - -0.2 709,796 - +1.0 709,861 + AO353_03330 0.14 -0.9 709,862 - AO353_03330 0.15 -0.7 709,930 + AO353_03330 0.29 +0.3 709,930 + AO353_03330 0.29 -0.9 709,930 + AO353_03330 0.29 -1.2 709,931 - AO353_03330 0.29 -1.0 709,931 - AO353_03330 0.29 -0.6 709,931 - AO353_03330 0.29 +1.0 710,033 + AO353_03330 0.51 -0.7 710,034 - AO353_03330 0.51 -0.7 710,034 - AO353_03330 0.51 +0.1 710,034 - AO353_03330 0.51 -0.2 710,034 - AO353_03330 0.51 -0.6 710,088 - AO353_03330 0.63 -0.2 710,246 + -2.2 710,246 + -0.2 710,246 + -0.6 710,247 - -0.2 710,247 - +0.1 710,247 - +1.8 710,290 + -0.0 710,290 + +1.8 710,290 + -0.7 710,291 - -0.7 710,291 - +0.5 710,291 - -2.2 710,295 - -0.7 710,295 - +0.8 710,352 + +1.3 710,352 + -0.0 710,353 - +0.8 710,353 - +1.4 710,357 + +1.5 710,364 + +1.4 710,365 - -0.5 710,387 + +0.3 710,387 + -0.7 710,387 + -0.8 710,388 - +1.8 710,388 - -0.2 710,388 - -0.2 710,430 - +0.0 710,519 + AO353_03335 0.23 -0.7 710,519 + AO353_03335 0.23 +0.3 710,519 + AO353_03335 0.23 +1.1 710,519 + AO353_03335 0.23 +1.4 710,520 - AO353_03335 0.23 -0.2 710,520 - AO353_03335 0.23 +2.3 710,520 - AO353_03335 0.23 -0.1 710,520 - AO353_03335 0.23 -0.2 710,520 - AO353_03335 0.23 -1.2 710,520 - AO353_03335 0.23 +1.1 710,520 - AO353_03335 0.23 +1.1 710,555 + AO353_03335 0.38 +1.4 710,555 + AO353_03335 0.38 -2.0 710,555 + AO353_03335 0.38 -0.3 710,556 - AO353_03335 0.38 +0.6 710,556 - AO353_03335 0.38 -0.3 710,628 + AO353_03335 0.69 +1.4 710,628 + AO353_03335 0.69 -1.0 710,628 + AO353_03335 0.69 +0.8 710,628 + AO353_03335 0.69 -0.7 710,628 + AO353_03335 0.69 -0.5 710,628 + AO353_03335 0.69 -2.9 710,628 + AO353_03335 0.69 +0.2 710,629 - AO353_03335 0.69 -1.0 710,629 - AO353_03335 0.69 +0.3 710,783 + +0.1 710,822 + -0.6 710,823 - +0.9 710,858 + AO353_03340 0.11 +0.8 710,859 - AO353_03340 0.12 +0.8 710,940 + AO353_03340 0.18 -1.0 710,940 + AO353_03340 0.18 -0.0 710,940 + AO353_03340 0.18 +0.5 710,941 - AO353_03340 0.18 -0.2 711,035 + AO353_03340 0.26 +1.2 711,035 + AO353_03340 0.26 +0.9 711,035 + AO353_03340 0.26 +1.7 711,035 + AO353_03340 0.26 -1.6 711,035 + AO353_03340 0.26 +0.6 711,035 + AO353_03340 0.26 -0.5 711,036 - AO353_03340 0.26 -0.7 711,036 - AO353_03340 0.26 +1.6 711,036 - AO353_03340 0.26 +0.8 711,083 + AO353_03340 0.30 -1.1 711,084 - AO353_03340 0.31 +0.6 711,084 - AO353_03340 0.31 +0.8 711,191 + AO353_03340 0.40 +0.6 711,191 + AO353_03340 0.40 +1.2 711,192 - AO353_03340 0.40 -0.2
Or see this region's nucleotide sequence