Experiment: Furfuryl Alcohol 0.125 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_01260 and AO353_01265 are separated by 60 nucleotides AO353_01265 and AO353_01270 are separated by 9 nucleotides AO353_01270 and AO353_01275 are separated by 297 nucleotides AO353_01275 and AO353_01280 are separated by 209 nucleotides
AO353_01260: AO353_01260 - transcriptional regulator, at 276,305 to 277,099
_01260
AO353_01265: AO353_01265 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase, at 277,160 to 277,789
_01265
AO353_01270: AO353_01270 - 2-dehydro-3-deoxygalactonokinase, at 277,799 to 278,794
_01270
AO353_01275: AO353_01275 - hypothetical protein, at 279,092 to 279,391
_01275
AO353_01280: AO353_01280 - hypothetical protein, at 279,601 to 280,095
_01280
Position (kb)
277
278
279 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 276.816 kb on + strand, within AO353_01260 at 276.816 kb on + strand, within AO353_01260 at 276.817 kb on - strand, within AO353_01260 at 276.895 kb on - strand, within AO353_01260 at 276.978 kb on - strand, within AO353_01260 at 277.099 kb on + strand at 277.099 kb on + strand at 277.099 kb on + strand at 277.099 kb on + strand at 277.100 kb on - strand at 277.100 kb on - strand at 277.100 kb on - strand at 277.100 kb on - strand at 277.100 kb on - strand at 277.139 kb on - strand at 277.161 kb on + strand at 277.161 kb on + strand at 277.161 kb on + strand at 277.161 kb on + strand at 277.162 kb on - strand at 277.162 kb on - strand at 277.162 kb on - strand at 277.162 kb on - strand at 277.162 kb on - strand at 277.162 kb on - strand at 277.197 kb on + strand at 277.197 kb on + strand at 277.197 kb on + strand at 277.198 kb on - strand at 277.198 kb on - strand at 277.198 kb on - strand at 277.198 kb on - strand at 277.198 kb on - strand at 277.198 kb on - strand at 277.198 kb on - strand at 277.352 kb on + strand, within AO353_01265 at 277.352 kb on + strand, within AO353_01265 at 277.353 kb on - strand, within AO353_01265 at 277.353 kb on - strand, within AO353_01265 at 277.476 kb on + strand, within AO353_01265 at 277.477 kb on - strand, within AO353_01265 at 277.477 kb on - strand, within AO353_01265 at 277.477 kb on - strand, within AO353_01265 at 277.477 kb on - strand, within AO353_01265 at 277.477 kb on - strand, within AO353_01265 at 277.477 kb on - strand, within AO353_01265 at 277.477 kb on - strand, within AO353_01265 at 277.648 kb on - strand, within AO353_01265 at 277.698 kb on + strand, within AO353_01265 at 277.698 kb on + strand, within AO353_01265 at 277.699 kb on - strand, within AO353_01265 at 277.699 kb on - strand, within AO353_01265 at 277.800 kb on + strand at 277.801 kb on - strand at 277.913 kb on - strand, within AO353_01270 at 278.047 kb on - strand, within AO353_01270 at 278.047 kb on - strand, within AO353_01270 at 278.047 kb on - strand, within AO353_01270 at 278.440 kb on + strand, within AO353_01270 at 278.440 kb on + strand, within AO353_01270 at 278.520 kb on + strand, within AO353_01270 at 278.521 kb on - strand, within AO353_01270 at 278.742 kb on + strand at 278.742 kb on + strand at 278.835 kb on + strand at 278.835 kb on + strand at 278.835 kb on + strand at 278.835 kb on + strand at 278.836 kb on - strand at 278.836 kb on - strand at 278.836 kb on - strand at 278.836 kb on - strand at 278.837 kb on + strand at 278.838 kb on - strand at 279.040 kb on - strand at 279.093 kb on + strand at 279.103 kb on + strand at 279.117 kb on - strand at 279.139 kb on + strand at 279.140 kb on - strand, within AO353_01275 at 279.154 kb on - strand, within AO353_01275 at 279.154 kb on - strand, within AO353_01275 at 279.196 kb on + strand, within AO353_01275 at 279.198 kb on + strand, within AO353_01275 at 279.229 kb on + strand, within AO353_01275 at 279.243 kb on + strand, within AO353_01275 at 279.243 kb on + strand, within AO353_01275 at 279.243 kb on + strand, within AO353_01275 at 279.244 kb on - strand, within AO353_01275 at 279.352 kb on + strand, within AO353_01275 at 279.353 kb on - strand, within AO353_01275 at 279.482 kb on - strand at 279.501 kb on - strand at 279.501 kb on - strand at 279.501 kb on - strand at 279.501 kb on - strand at 279.505 kb on - strand at 279.505 kb on - strand at 279.633 kb on + strand at 279.634 kb on - strand at 279.634 kb on - strand at 279.637 kb on + strand at 279.637 kb on + strand at 279.637 kb on + strand at 279.638 kb on - strand at 279.638 kb on - strand at 279.638 kb on - strand at 279.638 kb on - strand at 279.660 kb on - strand, within AO353_01280 at 279.667 kb on - strand, within AO353_01280 at 279.667 kb on - strand, within AO353_01280 at 279.668 kb on + strand, within AO353_01280 at 279.669 kb on - strand, within AO353_01280 at 279.669 kb on - strand, within AO353_01280 at 279.669 kb on - strand, within AO353_01280 at 279.672 kb on + strand, within AO353_01280 at 279.672 kb on + strand, within AO353_01280 at 279.673 kb on - strand, within AO353_01280 at 279.673 kb on - strand, within AO353_01280 at 279.678 kb on + strand, within AO353_01280
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.125 vol% remove 276,816 + AO353_01260 0.64 +1.2 276,816 + AO353_01260 0.64 -0.4 276,817 - AO353_01260 0.64 -0.3 276,895 - AO353_01260 0.74 -0.3 276,978 - AO353_01260 0.85 -0.0 277,099 + -0.2 277,099 + +0.7 277,099 + +0.2 277,099 + -0.1 277,100 - +0.9 277,100 - +1.5 277,100 - +0.1 277,100 - -0.9 277,100 - -0.2 277,139 - +2.0 277,161 + +1.2 277,161 + +0.7 277,161 + +0.0 277,161 + +1.2 277,162 - +0.3 277,162 - -0.3 277,162 - +0.3 277,162 - -0.3 277,162 - -0.3 277,162 - -0.6 277,197 + +0.5 277,197 + -0.0 277,197 + -0.5 277,198 - +0.3 277,198 - +0.3 277,198 - -2.3 277,198 - +0.7 277,198 - +0.5 277,198 - +1.0 277,198 - +1.1 277,352 + AO353_01265 0.30 -0.1 277,352 + AO353_01265 0.30 +1.1 277,353 - AO353_01265 0.31 -0.3 277,353 - AO353_01265 0.31 -0.2 277,476 + AO353_01265 0.50 +0.1 277,477 - AO353_01265 0.50 +0.5 277,477 - AO353_01265 0.50 -1.9 277,477 - AO353_01265 0.50 +0.2 277,477 - AO353_01265 0.50 -0.3 277,477 - AO353_01265 0.50 -0.6 277,477 - AO353_01265 0.50 +0.4 277,477 - AO353_01265 0.50 -1.6 277,648 - AO353_01265 0.77 +1.3 277,698 + AO353_01265 0.85 +0.5 277,698 + AO353_01265 0.85 +0.7 277,699 - AO353_01265 0.86 -0.3 277,699 - AO353_01265 0.86 +0.1 277,800 + +0.7 277,801 - -1.3 277,913 - AO353_01270 0.11 -0.3 278,047 - AO353_01270 0.25 -0.4 278,047 - AO353_01270 0.25 -0.4 278,047 - AO353_01270 0.25 -0.1 278,440 + AO353_01270 0.64 -2.8 278,440 + AO353_01270 0.64 +0.1 278,520 + AO353_01270 0.72 +0.7 278,521 - AO353_01270 0.72 -0.8 278,742 + +0.8 278,742 + -0.3 278,835 + -0.3 278,835 + +0.7 278,835 + +0.1 278,835 + +1.3 278,836 - +0.1 278,836 - -1.3 278,836 - +1.1 278,836 - -0.0 278,837 + +2.4 278,838 - -1.6 279,040 - -0.7 279,093 + -1.5 279,103 + -1.3 279,117 - +0.3 279,139 + -0.6 279,140 - AO353_01275 0.16 +1.0 279,154 - AO353_01275 0.21 +0.6 279,154 - AO353_01275 0.21 +1.0 279,196 + AO353_01275 0.35 -0.3 279,198 + AO353_01275 0.35 +0.3 279,229 + AO353_01275 0.46 +0.1 279,243 + AO353_01275 0.50 +0.0 279,243 + AO353_01275 0.50 -0.8 279,243 + AO353_01275 0.50 -0.6 279,244 - AO353_01275 0.51 -0.3 279,352 + AO353_01275 0.87 -0.1 279,353 - AO353_01275 0.87 +1.1 279,482 - +0.1 279,501 - +0.3 279,501 - -0.2 279,501 - -0.9 279,501 - -0.5 279,505 - -0.0 279,505 - +0.1 279,633 + -0.9 279,634 - -0.4 279,634 - +1.2 279,637 + +0.0 279,637 + -0.5 279,637 + +0.7 279,638 - +0.1 279,638 - +0.3 279,638 - +0.0 279,638 - +0.3 279,660 - AO353_01280 0.12 +0.1 279,667 - AO353_01280 0.13 -0.0 279,667 - AO353_01280 0.13 +1.2 279,668 + AO353_01280 0.14 -0.3 279,669 - AO353_01280 0.14 +0.2 279,669 - AO353_01280 0.14 +0.7 279,669 - AO353_01280 0.14 -1.3 279,672 + AO353_01280 0.14 -0.2 279,672 + AO353_01280 0.14 +0.1 279,673 - AO353_01280 0.15 -0.3 279,673 - AO353_01280 0.15 +0.3 279,678 + AO353_01280 0.16 -1.8
Or see this region's nucleotide sequence