Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1818 and DvMF_1819 are separated by 34 nucleotides DvMF_1819 and DvMF_1820 are separated by 482 nucleotides
DvMF_1818: DvMF_1818 - Radical SAM domain protein (RefSeq), at 2,218,752 to 2,219,468
_1818
DvMF_1819: DvMF_1819 - anaerobic ribonucleoside triphosphate reductase (RefSeq), at 2,219,503 to 2,221,413
_1819
DvMF_1820: DvMF_1820 - hypothetical protein (RefSeq), at 2,221,896 to 2,223,434
_1820
Position (kb)
2219
2220
2221
2222 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2218.537 kb on - strand at 2218.970 kb on + strand, within DvMF_1818 at 2218.978 kb on - strand, within DvMF_1818 at 2219.233 kb on - strand, within DvMF_1818 at 2219.349 kb on - strand, within DvMF_1818 at 2219.408 kb on - strand at 2219.501 kb on + strand at 2219.501 kb on + strand at 2219.509 kb on - strand at 2219.509 kb on - strand at 2219.750 kb on + strand, within DvMF_1819 at 2219.789 kb on - strand, within DvMF_1819 at 2219.887 kb on + strand, within DvMF_1819 at 2219.887 kb on + strand, within DvMF_1819 at 2219.887 kb on + strand, within DvMF_1819 at 2220.053 kb on + strand, within DvMF_1819 at 2220.364 kb on - strand, within DvMF_1819 at 2220.480 kb on + strand, within DvMF_1819 at 2220.587 kb on + strand, within DvMF_1819 at 2220.587 kb on + strand, within DvMF_1819 at 2220.595 kb on - strand, within DvMF_1819 at 2220.606 kb on + strand, within DvMF_1819 at 2220.611 kb on + strand, within DvMF_1819 at 2220.669 kb on - strand, within DvMF_1819 at 2220.931 kb on + strand, within DvMF_1819 at 2220.939 kb on - strand, within DvMF_1819 at 2220.969 kb on + strand, within DvMF_1819 at 2220.977 kb on - strand, within DvMF_1819 at 2221.034 kb on - strand, within DvMF_1819 at 2221.263 kb on - strand at 2221.635 kb on + strand at 2222.010 kb on - strand at 2222.208 kb on - strand, within DvMF_1820
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 2,218,537 - -1.0 2,218,970 + DvMF_1818 0.30 -1.0 2,218,978 - DvMF_1818 0.32 -1.4 2,219,233 - DvMF_1818 0.67 -3.9 2,219,349 - DvMF_1818 0.83 -1.7 2,219,408 - -0.3 2,219,501 + -1.0 2,219,501 + -0.4 2,219,509 - -0.8 2,219,509 - -1.0 2,219,750 + DvMF_1819 0.13 -1.4 2,219,789 - DvMF_1819 0.15 -0.5 2,219,887 + DvMF_1819 0.20 -1.6 2,219,887 + DvMF_1819 0.20 -0.7 2,219,887 + DvMF_1819 0.20 -0.5 2,220,053 + DvMF_1819 0.29 +1.0 2,220,364 - DvMF_1819 0.45 -0.8 2,220,480 + DvMF_1819 0.51 -0.6 2,220,587 + DvMF_1819 0.57 -0.8 2,220,587 + DvMF_1819 0.57 -0.8 2,220,595 - DvMF_1819 0.57 -1.7 2,220,606 + DvMF_1819 0.58 -0.8 2,220,611 + DvMF_1819 0.58 -0.7 2,220,669 - DvMF_1819 0.61 -0.6 2,220,931 + DvMF_1819 0.75 -0.7 2,220,939 - DvMF_1819 0.75 -0.7 2,220,969 + DvMF_1819 0.77 -0.9 2,220,977 - DvMF_1819 0.77 -0.7 2,221,034 - DvMF_1819 0.80 -1.9 2,221,263 - -0.5 2,221,635 + -1.0 2,222,010 - -0.3 2,222,208 - DvMF_1820 0.20 -0.7
Or see this region's nucleotide sequence