Experiment: Defined MoLS4
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1131 and DvMF_1132 overlap by 11 nucleotides DvMF_1132 and DvMF_1133 are separated by 106 nucleotides DvMF_1133 and DvMF_1134 are separated by 182 nucleotides
DvMF_1131: DvMF_1131 - response regulator receiver sensor signal transduction histidine kinase (RefSeq), at 1,387,508 to 1,389,010
_1131
DvMF_1132: DvMF_1132 - pseudouridine synthase (RefSeq), at 1,389,000 to 1,390,391
_1132
DvMF_1133: DvMF_1133 - hypothetical protein (RefSeq), at 1,390,498 to 1,391,184
_1133
DvMF_1134: DvMF_1134 - single-stranded-DNA-specific exonuclease RecJ (RefSeq), at 1,391,367 to 1,393,082
_1134
Position (kb)
1388
1389
1390
1391 Strain fitness (log2 ratio)
-1
0
1 at 1388.069 kb on - strand, within DvMF_1131 at 1388.320 kb on + strand, within DvMF_1131 at 1388.692 kb on - strand, within DvMF_1131 at 1388.825 kb on - strand, within DvMF_1131 at 1388.960 kb on - strand at 1389.004 kb on + strand at 1389.136 kb on - strand at 1389.175 kb on + strand, within DvMF_1132 at 1389.464 kb on + strand, within DvMF_1132 at 1389.464 kb on + strand, within DvMF_1132 at 1389.517 kb on + strand, within DvMF_1132 at 1389.551 kb on + strand, within DvMF_1132 at 1389.886 kb on + strand, within DvMF_1132 at 1390.248 kb on - strand, within DvMF_1132 at 1390.558 kb on - strand at 1390.624 kb on - strand, within DvMF_1133 at 1390.695 kb on - strand, within DvMF_1133 at 1390.746 kb on + strand, within DvMF_1133 at 1391.254 kb on + strand at 1391.262 kb on - strand at 1391.327 kb on - strand at 1391.391 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Defined MoLS4 remove 1,388,069 - DvMF_1131 0.37 +1.2 1,388,320 + DvMF_1131 0.54 +0.5 1,388,692 - DvMF_1131 0.79 +0.4 1,388,825 - DvMF_1131 0.88 -0.3 1,388,960 - +0.0 1,389,004 + +1.4 1,389,136 - -0.3 1,389,175 + DvMF_1132 0.13 -0.6 1,389,464 + DvMF_1132 0.33 +1.6 1,389,464 + DvMF_1132 0.33 -0.4 1,389,517 + DvMF_1132 0.37 -0.5 1,389,551 + DvMF_1132 0.40 -0.1 1,389,886 + DvMF_1132 0.64 -0.4 1,390,248 - DvMF_1132 0.90 -0.5 1,390,558 - -0.5 1,390,624 - DvMF_1133 0.18 -0.3 1,390,695 - DvMF_1133 0.29 -0.5 1,390,746 + DvMF_1133 0.36 -1.0 1,391,254 + -0.9 1,391,262 - +0.3 1,391,327 - -0.5 1,391,391 + -0.2
Or see this region's nucleotide sequence