Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37480

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,887,120	+		RR42_RS37475	0.52	-2.4
3,887,121	-		RR42_RS37475	0.53	-1.9
3,887,327	+		RR42_RS37475	0.66	-3.0
3,887,327	+		RR42_RS37475	0.66	-0.8
3,887,327	+		RR42_RS37475	0.66	-3.3
3,887,327	+		RR42_RS37475	0.66	+1.0
3,887,328	-		RR42_RS37475	0.66	-2.4
3,887,454	+		RR42_RS37475	0.74	+1.5
3,887,454	+		RR42_RS37475	0.74	-1.0
3,887,455	-		RR42_RS37475	0.74	+0.2
3,887,576	+		RR42_RS37475	0.81	+1.5
3,887,576	+		RR42_RS37475	0.81	-0.5
3,887,576	+		RR42_RS37475	0.81	-0.2
3,887,576	+		RR42_RS37475	0.81	-3.9
3,887,577	-		RR42_RS37475	0.81	-2.8
3,887,577	-		RR42_RS37475	0.81	-0.1
3,887,577	-		RR42_RS37475	0.81	+0.1
3,887,800	-				-0.8
3,887,855	-				-0.7
3,888,086	+				-1.7
3,888,195	+		RR42_RS37480	0.20	-0.7
3,888,195	+		RR42_RS37480	0.20	-3.5
3,888,196	-		RR42_RS37480	0.20	-2.5
3,888,206	+		RR42_RS37480	0.21	-0.4
3,888,813	+		RR42_RS37480	0.84	+1.0
3,888,813	+		RR42_RS37480	0.84	-0.9
3,888,814	-		RR42_RS37480	0.84	+0.4
3,888,814	-		RR42_RS37480	0.84	+2.6
3,888,814	-		RR42_RS37480	0.84	+0.2
3,888,815	+		RR42_RS37480	0.84	-2.3
3,888,815	+		RR42_RS37480	0.84	+2.3
3,888,815	+		RR42_RS37480	0.84	+0.7
3,888,815	+		RR42_RS37480	0.84	+1.6
3,888,815	+		RR42_RS37480	0.84	-2.0
3,888,815	+		RR42_RS37480	0.84	-3.3
3,888,815	+		RR42_RS37480	0.84	-2.4
3,888,815	+		RR42_RS37480	0.84	-2.8
3,888,816	-		RR42_RS37480	0.84	-2.2
3,888,816	-		RR42_RS37480	0.84	-1.7
3,888,816	-		RR42_RS37480	0.84	-1.3
3,888,816	-		RR42_RS37480	0.84	+0.6
3,888,816	-		RR42_RS37480	0.84	-2.6
3,888,816	-		RR42_RS37480	0.84	+0.7
3,888,816	-		RR42_RS37480	0.84	+0.5
3,888,816	-		RR42_RS37480	0.84	-3.5
3,888,816	-		RR42_RS37480	0.84	-2.0
3,889,029	-				-0.6
3,889,029	-				+0.3
3,889,051	-				-0.4
3,889,206	+				+1.1
3,889,207	-				-1.8
3,889,272	+				-0.6
3,889,272	+				+0.7
3,889,272	+				+0.4
3,889,273	-				+0.4
3,889,273	-				+0.1
3,889,354	-				-2.4
3,889,390	+				-1.1
3,889,773	+				-2.2
3,889,774	-				-2.3
3,889,826	+				-0.5
3,889,845	+				+2.1
3,889,845	+				-0.4
3,889,845	+				+0.3
3,889,845	+				+1.3
3,889,846	-				+1.4
3,889,901	+				+0.3
3,889,902	-				-3.2