Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37405

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,868,349	+		RR42_RS37395	0.86	+0.0
3,868,349	+		RR42_RS37395	0.86	+1.3
3,868,350	-		RR42_RS37395	0.86	-0.4
3,868,350	-		RR42_RS37395	0.86	-2.5
3,868,393	-				-2.4
3,868,703	-		RR42_RS37400	0.30	+2.0
3,869,158	+				+1.8
3,869,158	+				+0.9
3,869,159	-				+1.3
3,869,159	-				+0.7
3,869,166	+				+3.4
3,869,166	+				+1.2
3,869,167	-				-0.0
3,869,167	-				-0.1
3,869,206	+				+1.8
3,869,206	+				+2.3
3,869,207	-				+0.3
3,869,207	-				+1.1
3,869,308	+				+1.2
3,869,308	+				+2.7
3,869,342	+				-1.6
3,869,342	+				+0.7
3,869,343	-				-1.3
3,869,343	-				-0.8
3,869,343	-				+0.2
3,869,343	-				-2.2
3,869,343	-				+1.6
3,869,517	-		RR42_RS37405	0.20	-0.3
3,869,543	-		RR42_RS37405	0.22	+1.2
3,869,695	+		RR42_RS37405	0.32	+1.1
3,869,696	-		RR42_RS37405	0.32	+0.9
3,869,696	-		RR42_RS37405	0.32	-0.9
3,869,794	+				+2.2
3,869,794	+		RR42_RS37405	0.39	+0.2
3,870,019	+		RR42_RS37405	0.55	-1.2
3,870,164	-		RR42_RS37405	0.65	+1.2
3,870,178	+		RR42_RS37405	0.65	+0.1
3,870,199	+		RR42_RS37405	0.67	-0.2
3,870,330	-		RR42_RS37405	0.76	+2.2
3,870,330	-		RR42_RS37405	0.76	-2.7
3,870,349	+		RR42_RS37405	0.77	+1.6
3,870,349	+		RR42_RS37405	0.77	-1.4
3,870,350	-		RR42_RS37405	0.77	-0.3
3,870,350	-		RR42_RS37405	0.77	+3.5
3,870,437	-		RR42_RS37405	0.83	+1.2
3,870,437	-		RR42_RS37405	0.83	+0.6
3,870,437	-		RR42_RS37405	0.83	+1.1
3,870,437	-		RR42_RS37405	0.83	-2.7
3,870,437	-		RR42_RS37405	0.83	+2.2
3,870,437	-		RR42_RS37405	0.83	+0.6
3,870,437	-		RR42_RS37405	0.83	-1.7
3,870,437	-		RR42_RS37405	0.83	-0.3
3,870,523	+		RR42_RS37405	0.89	+1.2
3,870,524	-		RR42_RS37405	0.89	+1.2
3,870,524	-		RR42_RS37405	0.89	-2.3
3,870,524	-		RR42_RS37405	0.89	-1.2
3,870,689	-				-2.9
3,870,689	-				+1.6
3,870,689	-				-0.8
3,870,796	+				-2.1
3,870,796	+				-3.2
3,870,797	-				-0.4
3,870,797	-				-2.2
3,870,797	-				+1.3
3,870,812	+				-3.1
3,870,928	+				-0.0
3,871,440	+		RR42_RS37410	0.70	+0.3
3,871,440	+		RR42_RS37410	0.70	+1.1
3,871,440	+		RR42_RS37410	0.70	+0.6
3,871,440	+		RR42_RS37410	0.70	+0.7
3,871,450	+		RR42_RS37410	0.71	-3.5
3,871,480	+		RR42_RS37410	0.75	+1.3
3,871,622	-				+0.7
3,871,622	-				+0.6
3,871,622	-				+2.6
3,871,622	-				-2.6
3,871,668	+				+0.4
3,871,668	+				+0.7
3,871,668	+				-1.2
3,871,669	-				-1.7
3,871,669	-				+0.9