Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36695

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,687,170	+		RR42_RS36685	0.89	-3.3
3,687,171	-		RR42_RS36685	0.89	+1.3
3,687,171	-		RR42_RS36685	0.89	+0.8
3,687,865	-		RR42_RS36690	0.81	-2.5
3,687,868	+		RR42_RS36690	0.82	-1.9
3,687,868	+		RR42_RS36690	0.82	-1.5
3,687,868	+		RR42_RS36690	0.82	-0.0
3,687,868	+		RR42_RS36690	0.82	-2.6
3,687,868	+		RR42_RS36690	0.82	+1.6
3,687,869	-		RR42_RS36690	0.82	-3.1
3,687,869	-		RR42_RS36690	0.82	-0.7
3,688,186	+				+1.8
3,688,417	+		RR42_RS36695	0.10	-2.9
3,688,417	+		RR42_RS36695	0.10	+0.9
3,689,081	-		RR42_RS36695	0.32	+1.3
3,689,444	+		RR42_RS36695	0.43	-2.0
3,689,680	+		RR42_RS36695	0.51	+0.8
3,689,693	+		RR42_RS36695	0.51	-0.9
3,689,694	-		RR42_RS36695	0.51	-0.8
3,689,812	+		RR42_RS36695	0.55	-0.3
3,690,175	+		RR42_RS36695	0.66	+0.6
3,690,251	+		RR42_RS36695	0.69	+0.4
3,690,262	+		RR42_RS36695	0.69	-2.5
3,690,262	+		RR42_RS36695	0.69	-5.3
3,690,263	-		RR42_RS36695	0.69	-0.0
3,690,263	-		RR42_RS36695	0.69	-0.6
3,690,263	-		RR42_RS36695	0.69	-3.4
3,690,266	-		RR42_RS36695	0.69	+1.5
3,690,266	-		RR42_RS36695	0.69	-0.2
3,690,676	+		RR42_RS36695	0.82	-1.5
3,691,068	+				+0.6
3,691,069	-				-1.2
3,691,073	+				-0.1
3,691,073	+				-1.9
3,691,073	+				+1.4
3,691,073	+				-0.6
3,691,074	-				-0.7
3,691,074	-				-2.9
3,691,074	-				-4.2
3,691,212	-				-2.3
3,691,319	+				-3.8
3,691,613	+		RR42_RS36700	0.31	-0.1
3,691,815	+		RR42_RS36700	0.48	-0.3
3,691,816	-		RR42_RS36700	0.48	+0.8
3,691,816	-		RR42_RS36700	0.48	+0.7
3,692,001	-		RR42_RS36700	0.63	-0.1
3,692,001	-		RR42_RS36700	0.63	+0.8
3,692,001	-		RR42_RS36700	0.63	+1.6