Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36595

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,663,887	-		RR42_RS36590	0.62	-2.4
3,663,901	+		RR42_RS36590	0.63	+1.1
3,663,901	+		RR42_RS36590	0.63	+1.4
3,663,949	+		RR42_RS36590	0.68	+0.1
3,663,977	-		RR42_RS36590	0.70	-1.8
3,663,977	-		RR42_RS36590	0.70	+0.7
3,664,325	-				-0.7
3,664,482	+				+1.4
3,664,482	+				+1.0
3,664,482	+				-2.4
3,664,483	-				+0.7
3,664,483	-				+1.2
3,664,483	-				+0.8
3,664,483	-				+0.3
3,664,484	+				+0.6
3,664,484	+				-2.3
3,664,485	-				+2.2
3,664,485	-				-0.6
3,664,485	-				+2.6
3,664,667	+				+1.0
3,664,668	-				-0.7
3,664,681	+				-1.5
3,664,682	-				+0.3
3,664,699	+				-1.7
3,664,699	+				-1.3
3,664,700	-				+1.7
3,664,700	-				+0.4
3,664,701	+				-1.7
3,664,701	+				+0.5
3,664,701	+				-1.4
3,664,701	+				-0.3
3,664,701	+				-0.9
3,664,701	+				+0.0
3,664,701	+				-4.1
3,664,701	+				+0.1
3,664,702	-				+0.7
3,664,702	-				-3.1
3,664,702	-				+0.9
3,664,704	-				-0.2
3,664,757	+				-1.0
3,664,812	-				-0.3
3,665,003	+		RR42_RS36595	0.24	+1.3
3,665,003	+		RR42_RS36595	0.24	+2.1
3,665,003	+		RR42_RS36595	0.24	-2.7
3,665,003	+		RR42_RS36595	0.24	-4.2
3,665,003	+		RR42_RS36595	0.24	+0.1
3,665,003	+		RR42_RS36595	0.24	-0.9
3,665,004	-		RR42_RS36595	0.24	+2.1
3,665,004	-		RR42_RS36595	0.24	-3.8
3,665,004	-		RR42_RS36595	0.24	+2.4
3,665,004	-		RR42_RS36595	0.24	-0.9
3,665,171	+		RR42_RS36595	0.38	+2.0
3,665,172	-		RR42_RS36595	0.38	-0.6
3,665,441	+		RR42_RS36595	0.61	+0.7
3,665,441	+		RR42_RS36595	0.61	+0.5
3,665,442	-		RR42_RS36595	0.61	-2.9
3,665,442	-		RR42_RS36595	0.61	+0.8
3,665,504	+		RR42_RS36595	0.66	+0.9
3,665,505	-		RR42_RS36595	0.66	-1.4
3,665,505	-		RR42_RS36595	0.66	-2.3
3,665,531	+		RR42_RS36595	0.69	-0.2
3,665,532	-		RR42_RS36595	0.69	+1.4
3,665,607	-		RR42_RS36595	0.75	-2.7
3,665,607	-		RR42_RS36595	0.75	-0.6
3,665,639	+		RR42_RS36595	0.78	+3.1
3,665,855	+				-1.8
3,665,856	-				+0.8
3,666,442	+		RR42_RS36600	0.45	-4.7
3,666,442	+		RR42_RS36600	0.45	+0.1
3,666,442	+		RR42_RS36600	0.45	+3.1
3,666,443	-		RR42_RS36600	0.45	-0.1
3,666,443	-		RR42_RS36600	0.45	-0.6
3,666,443	-		RR42_RS36600	0.45	+1.4
3,666,443	-		RR42_RS36600	0.45	-3.9
3,666,443	-		RR42_RS36600	0.45	-0.0
3,666,443	-		RR42_RS36600	0.45	-0.9
3,666,443	-		RR42_RS36600	0.45	+0.6
3,666,547	+		RR42_RS36600	0.53	+2.0
3,666,557	-		RR42_RS36600	0.54	+1.0
3,666,568	+		RR42_RS36600	0.55	-1.7